Coexpression cluster: Cluster_6477 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140849 ATP-dependent H2AZ histone chaperone activity 25.0% (1/4) 12.87 0.000133 0.00599
GO:0140713 histone chaperone activity 25.0% (1/4) 12.87 0.000133 0.00599
GO:0140674 ATP-dependent histone chaperone activity 25.0% (1/4) 12.87 0.000133 0.00599
GO:0010027 thylakoid membrane organization 25.0% (1/4) 9.65 0.001244 0.016796
GO:0009668 plastid membrane organization 25.0% (1/4) 9.65 0.001244 0.016796
GO:0034243 regulation of transcription elongation by RNA polymerase II 25.0% (1/4) 9.38 0.001497 0.016839
GO:0140597 protein carrier chaperone 25.0% (1/4) 10.34 0.000772 0.017368
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 25.0% (1/4) 9.44 0.001444 0.017718
GO:0070816 obsolete phosphorylation of RNA polymerase II C-terminal domain 25.0% (1/4) 9.18 0.001723 0.017892
GO:0140096 catalytic activity, acting on a protein 75.0% (3/4) 3.73 0.000687 0.018559
GO:0140994 RNA polymerase II CTD heptapeptide repeat modifying activity 25.0% (1/4) 9.01 0.001936 0.018665
GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity 25.0% (1/4) 9.74 0.001171 0.019761
GO:0043486 obsolete histone exchange 25.0% (1/4) 10.72 0.000592 0.01999
GO:0032786 positive regulation of DNA-templated transcription, elongation 25.0% (1/4) 8.77 0.002294 0.02065
GO:0006465 signal peptide processing 25.0% (1/4) 9.8 0.001124 0.021686
GO:0042651 thylakoid membrane 25.0% (1/4) 7.22 0.006713 0.022103
GO:0034357 photosynthetic membrane 25.0% (1/4) 7.22 0.006713 0.022103
GO:0009889 regulation of biosynthetic process 50.0% (2/4) 3.98 0.005754 0.022196
GO:0019219 regulation of nucleobase-containing compound metabolic process 50.0% (2/4) 4.29 0.003782 0.022199
GO:0055035 plastid thylakoid membrane 25.0% (1/4) 7.34 0.006176 0.022534
GO:0009535 chloroplast thylakoid membrane 25.0% (1/4) 7.34 0.006176 0.022534
GO:0140104 molecular carrier activity 25.0% (1/4) 7.9 0.00418 0.022573
GO:0051604 protein maturation 25.0% (1/4) 7.49 0.005553 0.022717
GO:0140658 ATP-dependent chromatin remodeler activity 25.0% (1/4) 8.07 0.003709 0.02276
GO:0000307 cyclin-dependent protein kinase holoenzyme complex 25.0% (1/4) 8.14 0.003543 0.022777
GO:0016043 cellular component organization 50.0% (2/4) 4.24 0.004052 0.022793
GO:0031326 regulation of cellular biosynthetic process 50.0% (2/4) 3.98 0.005746 0.022815
GO:0045944 positive regulation of transcription by RNA polymerase II 25.0% (1/4) 7.1 0.007269 0.022821
GO:0019222 regulation of metabolic process 50.0% (2/4) 3.82 0.007137 0.02294
GO:0031323 regulation of cellular metabolic process 50.0% (2/4) 3.87 0.006709 0.023225
GO:0010556 regulation of macromolecule biosynthetic process 50.0% (2/4) 4.01 0.00555 0.023414
GO:0060255 regulation of macromolecule metabolic process 50.0% (2/4) 3.88 0.006631 0.023556
GO:0051252 regulation of RNA metabolic process 50.0% (2/4) 4.35 0.0035 0.023623
GO:0032784 regulation of DNA-templated transcription elongation 25.0% (1/4) 8.48 0.002806 0.023676
GO:2001141 regulation of RNA biosynthetic process 50.0% (2/4) 4.42 0.003172 0.023787
GO:0006355 regulation of DNA-templated transcription 50.0% (2/4) 4.42 0.003172 0.023787
GO:0010468 regulation of gene expression 50.0% (2/4) 4.02 0.005477 0.023851
GO:0005634 nucleus 50.0% (2/4) 3.76 0.007804 0.023945
GO:0071840 cellular component organization or biogenesis 50.0% (2/4) 4.08 0.005018 0.024196
GO:1902911 protein kinase complex 25.0% (1/4) 7.53 0.005394 0.024273
GO:0016485 protein processing 25.0% (1/4) 8.19 0.003417 0.024279
GO:1902554 serine/threonine protein kinase complex 25.0% (1/4) 7.56 0.005281 0.024585
GO:0080090 regulation of primary metabolic process 50.0% (2/4) 4.1 0.004921 0.024606
GO:0051171 regulation of nitrogen compound metabolic process 50.0% (2/4) 4.11 0.004831 0.025084
GO:0042170 plastid membrane 25.0% (1/4) 6.72 0.009432 0.028295
GO:0004252 serine-type endopeptidase activity 25.0% (1/4) 6.66 0.009822 0.028824
GO:0031968 organelle outer membrane 25.0% (1/4) 6.6 0.010238 0.029407
GO:0019867 outer membrane 25.0% (1/4) 6.53 0.010746 0.030224
GO:0061024 membrane organization 25.0% (1/4) 6.45 0.011387 0.030744
GO:0006338 chromatin remodeling 25.0% (1/4) 6.45 0.01136 0.031299
GO:0045893 positive regulation of DNA-templated transcription 25.0% (1/4) 6.32 0.012482 0.031793
GO:1902680 positive regulation of RNA biosynthetic process 25.0% (1/4) 6.32 0.012482 0.031793
GO:0006325 chromatin organization 25.0% (1/4) 6.33 0.012376 0.032761
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 25.0% (1/4) 5.98 0.015702 0.03419
GO:0050789 regulation of biological process 50.0% (2/4) 3.24 0.01566 0.034658
GO:0006518 peptide metabolic process 25.0% (1/4) 5.87 0.016978 0.034727
GO:0071824 protein-DNA complex organization 25.0% (1/4) 6.0 0.015492 0.034856
GO:0010557 positive regulation of macromolecule biosynthetic process 25.0% (1/4) 6.02 0.015275 0.03495
GO:0031328 positive regulation of cellular biosynthetic process 25.0% (1/4) 6.02 0.015275 0.03495
GO:0009891 positive regulation of biosynthetic process 25.0% (1/4) 6.02 0.015275 0.03495
GO:0008094 ATP-dependent activity, acting on DNA 25.0% (1/4) 5.92 0.016399 0.035141
GO:0008236 serine-type peptidase activity 25.0% (1/4) 5.87 0.016938 0.03518
GO:0017171 serine hydrolase activity 25.0% (1/4) 5.87 0.016938 0.03518
GO:0050794 regulation of cellular process 50.0% (2/4) 3.31 0.01424 0.035601
GO:0051254 positive regulation of RNA metabolic process 25.0% (1/4) 6.06 0.014867 0.035839
GO:0065007 biological regulation 50.0% (2/4) 3.14 0.017952 0.036171
GO:0061695 transferase complex, transferring phosphorus-containing groups 25.0% (1/4) 6.07 0.014755 0.036216
GO:0110165 cellular anatomical entity 75.0% (3/4) 2.09 0.019151 0.03747
GO:0031325 positive regulation of cellular metabolic process 25.0% (1/4) 5.71 0.018928 0.037577
GO:0003824 catalytic activity 75.0% (3/4) 2.05 0.020496 0.039529
GO:0009893 positive regulation of metabolic process 25.0% (1/4) 5.49 0.022008 0.039615
GO:0010604 positive regulation of macromolecule metabolic process 25.0% (1/4) 5.49 0.021995 0.040126
GO:0051173 positive regulation of nitrogen compound metabolic process 25.0% (1/4) 5.51 0.021707 0.040143
GO:0009987 cellular process 75.0% (3/4) 2.03 0.021554 0.040414
GO:0048522 positive regulation of cellular process 25.0% (1/4) 5.54 0.021367 0.040627
GO:0019538 protein metabolic process 50.0% (2/4) 2.95 0.023147 0.041116
GO:0004175 endopeptidase activity 25.0% (1/4) 5.33 0.024552 0.043046
GO:0043603 amide metabolic process 25.0% (1/4) 5.31 0.024925 0.043139
GO:0048518 positive regulation of biological process 25.0% (1/4) 5.28 0.025565 0.043686
GO:0043227 membrane-bounded organelle 50.0% (2/4) 2.82 0.027213 0.043735
GO:0005575 cellular_component 75.0% (3/4) 1.91 0.027169 0.044191
GO:0098588 bounding membrane of organelle 25.0% (1/4) 5.2 0.026889 0.044269
GO:0006357 regulation of transcription by RNA polymerase II 25.0% (1/4) 5.24 0.026256 0.044308
GO:0043231 intracellular membrane-bounded organelle 50.0% (2/4) 2.83 0.026827 0.044711
GO:0140097 catalytic activity, acting on DNA 25.0% (1/4) 5.0 0.030803 0.048922
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms