Coexpression cluster: Cluster_919 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 24.04% (25/104) 6.37 0.0 0.0
GO:0044391 ribosomal subunit 21.15% (22/104) 6.59 0.0 0.0
GO:0005198 structural molecule activity 25.0% (26/104) 5.71 0.0 0.0
GO:0005840 ribosome 20.19% (21/104) 6.35 0.0 0.0
GO:0006412 translation 20.19% (21/104) 5.94 0.0 0.0
GO:0043043 peptide biosynthetic process 20.19% (21/104) 5.82 0.0 0.0
GO:0006518 peptide metabolic process 20.19% (21/104) 5.56 0.0 0.0
GO:0043604 amide biosynthetic process 20.19% (21/104) 5.43 0.0 0.0
GO:0022625 cytosolic large ribosomal subunit 14.42% (15/104) 7.06 0.0 0.0
GO:1990904 ribonucleoprotein complex 23.08% (24/104) 4.75 0.0 0.0
GO:0043603 amide metabolic process 21.15% (22/104) 5.07 0.0 0.0
GO:0015934 large ribosomal subunit 14.42% (15/104) 6.78 0.0 0.0
GO:0009058 biosynthetic process 31.73% (33/104) 3.2 0.0 0.0
GO:0044249 cellular biosynthetic process 29.81% (31/104) 3.31 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 22.12% (23/104) 4.15 0.0 0.0
GO:0043228 non-membrane-bounded organelle 22.12% (23/104) 4.15 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 22.12% (23/104) 4.15 0.0 0.0
GO:0009059 macromolecule biosynthetic process 22.12% (23/104) 4.13 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 21.15% (22/104) 3.8 0.0 0.0
GO:1901576 organic substance biosynthetic process 26.92% (28/104) 3.04 0.0 0.0
GO:0032991 protein-containing complex 30.77% (32/104) 2.73 0.0 0.0
GO:0008152 metabolic process 50.0% (52/104) 1.64 0.0 0.0
GO:0071704 organic substance metabolic process 48.08% (50/104) 1.65 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 35.58% (37/104) 2.1 0.0 0.0
GO:0009987 cellular process 51.92% (54/104) 1.49 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 28.85% (30/104) 2.43 0.0 0.0
GO:0044237 cellular metabolic process 41.35% (43/104) 1.82 0.0 0.0
GO:0005575 cellular_component 53.85% (56/104) 1.43 0.0 0.0
GO:0006807 nitrogen compound metabolic process 41.35% (43/104) 1.78 0.0 0.0
GO:0043226 organelle 33.65% (35/104) 2.04 0.0 0.0
GO:0043229 intracellular organelle 33.65% (35/104) 2.05 0.0 0.0
GO:0022627 cytosolic small ribosomal subunit 6.73% (7/104) 6.7 0.0 0.0
GO:0043170 macromolecule metabolic process 37.5% (39/104) 1.78 0.0 0.0
GO:0008150 biological_process 60.58% (63/104) 1.12 0.0 0.0
GO:0015935 small ribosomal subunit 6.73% (7/104) 6.27 0.0 0.0
GO:0110165 cellular anatomical entity 46.15% (48/104) 1.38 0.0 0.0
GO:0044238 primary metabolic process 41.35% (43/104) 1.52 0.0 0.0
GO:0019538 protein metabolic process 26.92% (28/104) 2.05 0.0 0.0
GO:0003723 RNA binding 15.38% (16/104) 2.8 0.0 0.0
GO:0009691 cytokinin biosynthetic process 3.85% (4/104) 7.73 0.0 0.0
GO:0042446 hormone biosynthetic process 3.85% (4/104) 7.36 0.0 0.0
GO:0000028 ribosomal small subunit assembly 3.85% (4/104) 7.14 0.0 0.0
GO:0009690 cytokinin metabolic process 3.85% (4/104) 6.89 0.0 1e-06
GO:0003674 molecular_function 61.54% (64/104) 0.8 0.0 1e-06
GO:0022618 protein-RNA complex assembly 5.77% (6/104) 4.89 0.0 1e-06
GO:0071826 protein-RNA complex organization 5.77% (6/104) 4.84 0.0 1e-06
GO:0065003 protein-containing complex assembly 6.73% (7/104) 3.64 2e-06 2.1e-05
GO:0019843 rRNA binding 3.85% (4/104) 5.54 2e-06 2.2e-05
GO:0042445 hormone metabolic process 3.85% (4/104) 5.36 3e-06 3.6e-05
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2.88% (3/104) 6.47 6e-06 6.6e-05
GO:0010817 regulation of hormone levels 3.85% (4/104) 5.07 7e-06 7.6e-05
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 3.85% (4/104) 5.0 9e-06 9.1e-05
GO:0034660 ncRNA metabolic process 7.69% (8/104) 2.94 1.1e-05 0.000115
GO:0003676 nucleic acid binding 19.23% (20/104) 1.55 1.3e-05 0.000132
GO:0009308 amine metabolic process 3.85% (4/104) 4.83 1.4e-05 0.000136
GO:0002181 cytoplasmic translation 2.88% (3/104) 6.04 1.5e-05 0.000141
GO:0005829 cytosol 8.65% (9/104) 2.61 1.9e-05 0.00018
GO:0022607 cellular component assembly 6.73% (7/104) 3.06 2.3e-05 0.000218
GO:0000470 maturation of LSU-rRNA 2.88% (3/104) 5.6 3.6e-05 0.000331
GO:0006396 RNA processing 7.69% (8/104) 2.68 4.1e-05 0.000367
GO:0043933 protein-containing complex organization 6.73% (7/104) 2.9 4.8e-05 0.000423
GO:0006725 cellular aromatic compound metabolic process 15.38% (16/104) 1.58 8.5e-05 0.000744
GO:0034470 ncRNA processing 5.77% (6/104) 3.0 0.000115 0.000986
GO:0005488 binding 38.46% (40/104) 0.77 0.000191 0.001608
GO:0046483 heterocycle metabolic process 14.42% (15/104) 1.52 0.000228 0.00189
GO:0016070 RNA metabolic process 9.62% (10/104) 1.99 0.000231 0.001893
GO:0016798 hydrolase activity, acting on glycosyl bonds 5.77% (6/104) 2.71 0.000336 0.002712
GO:0008135 translation factor activity, RNA binding 2.88% (3/104) 4.17 0.000668 0.005229
GO:0090079 translation regulator activity, nucleic acid binding 2.88% (3/104) 4.17 0.000668 0.005229
GO:0006364 rRNA processing 3.85% (4/104) 3.3 0.000784 0.006045
GO:0065008 regulation of biological quality 3.85% (4/104) 3.27 0.000841 0.006393
GO:0045182 translation regulator activity 2.88% (3/104) 3.99 0.000955 0.007068
GO:0003746 translation elongation factor activity 1.92% (2/104) 5.49 0.000955 0.007165
GO:0016072 rRNA metabolic process 3.85% (4/104) 3.19 0.001047 0.007637
GO:0097159 organic cyclic compound binding 25.96% (27/104) 0.85 0.00134 0.009649
GO:0030695 GTPase regulator activity 2.88% (3/104) 3.8 0.001379 0.009672
GO:0060589 nucleoside-triphosphatase regulator activity 2.88% (3/104) 3.8 0.001379 0.009672
GO:0030519 snoRNP binding 0.96% (1/104) 9.17 0.001729 0.011821
GO:0062064 box C/D snoRNP complex binding 0.96% (1/104) 9.17 0.001729 0.011821
GO:0006399 tRNA metabolic process 3.85% (4/104) 2.94 0.001967 0.013275
GO:0090697 post-embryonic plant organ morphogenesis 0.96% (1/104) 8.8 0.002248 0.013485
GO:0048444 floral organ morphogenesis 0.96% (1/104) 8.8 0.002248 0.013485
GO:0090156 intracellular sphingolipid homeostasis 0.96% (1/104) 8.8 0.002248 0.013485
GO:0009939 positive regulation of gibberellic acid mediated signaling pathway 0.96% (1/104) 8.8 0.002248 0.013485
GO:0010331 gibberellin binding 0.96% (1/104) 8.8 0.002248 0.013485
GO:0010325 raffinose family oligosaccharide biosynthetic process 0.96% (1/104) 8.8 0.002248 0.013485
GO:0035339 SPOTS complex 0.96% (1/104) 8.8 0.002248 0.013485
GO:0006414 translational elongation 1.92% (2/104) 4.93 0.002026 0.013505
GO:0005853 eukaryotic translation elongation factor 1 complex 0.96% (1/104) 8.91 0.002075 0.013664
GO:0005085 guanyl-nucleotide exchange factor activity 1.92% (2/104) 4.9 0.002121 0.013802
GO:0006406 mRNA export from nucleus 1.92% (2/104) 4.63 0.003076 0.018052
GO:0051028 mRNA transport 1.92% (2/104) 4.63 0.003076 0.018052
GO:0090698 post-embryonic plant morphogenesis 0.96% (1/104) 8.25 0.003283 0.019064
GO:0000380 alternative mRNA splicing, via spliceosome 0.96% (1/104) 8.1 0.003628 0.020842
GO:0006457 protein folding 2.88% (3/104) 3.28 0.003817 0.021699
GO:0009937 regulation of gibberellic acid mediated signaling pathway 0.96% (1/104) 7.97 0.003973 0.022118
GO:0005643 nuclear pore 1.92% (2/104) 4.44 0.003961 0.022282
GO:1905392 plant organ morphogenesis 0.96% (1/104) 7.74 0.004662 0.025177
GO:1901004 ubiquinone-6 metabolic process 0.96% (1/104) 7.74 0.004662 0.025177
GO:1901006 ubiquinone-6 biosynthetic process 0.96% (1/104) 7.74 0.004662 0.025177
GO:0052929 ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity 0.96% (1/104) 7.64 0.005007 0.025997
GO:0001680 tRNA 3'-terminal CCA addition 0.96% (1/104) 7.64 0.005007 0.025997
GO:0042780 tRNA 3'-end processing 0.96% (1/104) 7.64 0.005007 0.025997
GO:0008915 lipid-A-disaccharide synthase activity 0.96% (1/104) 7.64 0.005007 0.025997
GO:0031211 endoplasmic reticulum palmitoyltransferase complex 0.96% (1/104) 7.5 0.005523 0.027875
GO:0017059 serine C-palmitoyltransferase complex 0.96% (1/104) 7.5 0.005523 0.027875
GO:0002178 palmitoyltransferase complex 0.96% (1/104) 7.5 0.005523 0.027875
GO:0031510 SUMO activating enzyme complex 0.96% (1/104) 7.37 0.00604 0.029921
GO:0019948 SUMO activating enzyme activity 0.96% (1/104) 7.37 0.00604 0.029921
GO:0006420 arginyl-tRNA aminoacylation 0.96% (1/104) 7.21 0.006728 0.032437
GO:0004814 arginine-tRNA ligase activity 0.96% (1/104) 7.21 0.006728 0.032437
GO:0140101 catalytic activity, acting on a tRNA 2.88% (3/104) 2.99 0.006646 0.032625
GO:0015292 uniporter activity 0.96% (1/104) 7.1 0.007243 0.034614
GO:0030692 Noc4p-Nop14p complex 0.96% (1/104) 7.04 0.007587 0.035625
GO:0070180 large ribosomal subunit rRNA binding 0.96% (1/104) 7.04 0.007587 0.035625
GO:0051236 establishment of RNA localization 1.92% (2/104) 3.85 0.008666 0.039324
GO:0050658 RNA transport 1.92% (2/104) 3.85 0.008666 0.039324
GO:0050657 nucleic acid transport 1.92% (2/104) 3.85 0.008666 0.039324
GO:0048208 COPII vesicle coating 0.96% (1/104) 6.82 0.008789 0.039549
GO:0006405 RNA export from nucleus 1.92% (2/104) 3.87 0.008501 0.039573
GO:0090304 nucleic acid metabolic process 9.62% (10/104) 1.27 0.008896 0.0397
GO:1901360 organic cyclic compound metabolic process 11.54% (12/104) 1.12 0.009137 0.040442
GO:0006139 nucleobase-containing compound metabolic process 10.58% (11/104) 1.17 0.009851 0.042898
GO:0043021 ribonucleoprotein complex binding 1.92% (2/104) 3.76 0.009817 0.043097
GO:0005851 eukaryotic translation initiation factor 2B complex 0.96% (1/104) 6.57 0.010503 0.044658
GO:0046705 CDP biosynthetic process 0.96% (1/104) 6.57 0.010503 0.044658
GO:0046704 CDP metabolic process 0.96% (1/104) 6.57 0.010503 0.044658
GO:0070973 protein localization to endoplasmic reticulum exit site 0.96% (1/104) 6.47 0.011188 0.047198
GO:0005262 calcium channel activity 0.96% (1/104) 6.39 0.011872 0.048939
GO:0008097 5S rRNA binding 0.96% (1/104) 6.39 0.011872 0.048939
GO:0000492 box C/D snoRNP assembly 0.96% (1/104) 6.39 0.011872 0.048939
GO:0071840 cellular component organization or biogenesis 7.69% (8/104) 1.38 0.01208 0.049417
GO:0016925 protein sumoylation 0.96% (1/104) 6.33 0.012385 0.049541
GO:0009368 endopeptidase Clp complex 0.96% (1/104) 6.33 0.012385 0.049541
GO:0006901 vesicle coating 0.96% (1/104) 6.35 0.012214 0.049591
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (104) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms