Coexpression cluster: Cluster_296 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0052929 ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity 4.04% (4/99) 9.71 0.0 0.0
GO:0001680 tRNA 3'-terminal CCA addition 4.04% (4/99) 9.71 0.0 0.0
GO:0042780 tRNA 3'-end processing 4.04% (4/99) 9.71 0.0 0.0
GO:0032561 guanyl ribonucleotide binding 9.09% (9/99) 4.65 0.0 0.0
GO:0005525 GTP binding 9.09% (9/99) 4.65 0.0 0.0
GO:0019001 guanyl nucleotide binding 9.09% (9/99) 4.61 0.0 0.0
GO:0003746 translation elongation factor activity 5.05% (5/99) 6.88 0.0 0.0
GO:0004525 ribonuclease III activity 5.05% (5/99) 6.88 0.0 0.0
GO:0032296 double-stranded RNA-specific ribonuclease activity 5.05% (5/99) 6.88 0.0 0.0
GO:0006412 translation 8.08% (8/99) 4.62 0.0 0.0
GO:0043043 peptide biosynthetic process 8.08% (8/99) 4.5 0.0 0.0
GO:0006414 translational elongation 5.05% (5/99) 6.33 0.0 0.0
GO:0030422 siRNA processing 5.05% (5/99) 6.21 0.0 0.0
GO:0006518 peptide metabolic process 8.08% (8/99) 4.24 0.0 0.0
GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters 6.06% (6/99) 5.18 0.0 0.0
GO:0043604 amide biosynthetic process 8.08% (8/99) 4.1 0.0 1e-06
GO:0034470 ncRNA processing 9.09% (9/99) 3.66 0.0 1e-06
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 6.06% (6/99) 4.98 0.0 1e-06
GO:0070918 regulatory ncRNA processing 5.05% (5/99) 5.59 0.0 1e-06
GO:0043603 amide metabolic process 8.08% (8/99) 3.68 0.0 4e-06
GO:0140098 catalytic activity, acting on RNA 10.1% (10/99) 3.12 0.0 4e-06
GO:0070566 adenylyltransferase activity 4.04% (4/99) 6.26 0.0 4e-06
GO:0004521 RNA endonuclease activity 6.06% (6/99) 4.44 0.0 6e-06
GO:0008135 translation factor activity, RNA binding 5.05% (5/99) 4.97 1e-06 8e-06
GO:0090079 translation regulator activity, nucleic acid binding 5.05% (5/99) 4.97 1e-06 8e-06
GO:0034660 ncRNA metabolic process 9.09% (9/99) 3.18 1e-06 9e-06
GO:0034641 cellular nitrogen compound metabolic process 19.19% (19/99) 1.84 1e-06 1.3e-05
GO:0045182 translation regulator activity 5.05% (5/99) 4.79 1e-06 1.4e-05
GO:0003924 GTPase activity 6.06% (6/99) 4.13 1e-06 1.6e-05
GO:0004540 RNA nuclease activity 6.06% (6/99) 4.05 2e-06 2e-05
GO:0004519 endonuclease activity 6.06% (6/99) 4.06 2e-06 2e-05
GO:0006396 RNA processing 9.09% (9/99) 2.92 3e-06 3.4e-05
GO:0031123 RNA 3'-end processing 4.04% (4/99) 4.68 2.1e-05 0.000195
GO:0003676 nucleic acid binding 19.19% (19/99) 1.55 2.2e-05 0.000197
GO:0004518 nuclease activity 6.06% (6/99) 3.44 2.2e-05 0.000201
GO:0140640 catalytic activity, acting on a nucleic acid 10.1% (10/99) 2.32 3.4e-05 0.000291
GO:1901566 organonitrogen compound biosynthetic process 8.08% (8/99) 2.7 3.5e-05 0.000298
GO:0009059 macromolecule biosynthetic process 8.08% (8/99) 2.68 4e-05 0.000326
GO:0003723 RNA binding 10.1% (10/99) 2.2 7e-05 0.00056
GO:0008033 tRNA processing 4.04% (4/99) 4.11 9.3e-05 0.000724
GO:0044271 cellular nitrogen compound biosynthetic process 8.08% (8/99) 2.41 0.000143 0.001085
GO:0022625 cytosolic large ribosomal subunit 3.03% (3/99) 4.81 0.000182 0.001348
GO:0015934 large ribosomal subunit 3.03% (3/99) 4.52 0.000324 0.002346
GO:0043170 macromolecule metabolic process 23.23% (23/99) 1.09 0.00034 0.0024
GO:0140101 catalytic activity, acting on a tRNA 4.04% (4/99) 3.47 0.000498 0.00344
GO:0097159 organic cyclic compound binding 27.27% (27/99) 0.93 0.000595 0.004023
GO:0016070 RNA metabolic process 9.09% (9/99) 1.91 0.000707 0.004679
GO:0016779 nucleotidyltransferase activity 4.04% (4/99) 3.27 0.000845 0.005363
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.06% (6/99) 2.46 0.000841 0.00545
GO:0002181 cytoplasmic translation 2.02% (2/99) 5.53 0.0009 0.005598
GO:0015693 magnesium ion transport 2.02% (2/99) 5.47 0.000969 0.005685
GO:0015095 magnesium ion transmembrane transporter activity 2.02% (2/99) 5.47 0.000969 0.005685
GO:0044237 cellular metabolic process 23.23% (23/99) 0.99 0.00096 0.005855
GO:0016787 hydrolase activity 14.14% (14/99) 1.37 0.001025 0.005903
GO:0016462 pyrophosphatase activity 6.06% (6/99) 2.36 0.001187 0.006712
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.06% (6/99) 2.34 0.001294 0.007186
GO:0006807 nitrogen compound metabolic process 23.23% (23/99) 0.95 0.001414 0.007328
GO:0005737 cytoplasm 10.1% (10/99) 1.65 0.001377 0.007386
GO:0044391 ribosomal subunit 3.03% (3/99) 3.79 0.001402 0.007392
GO:0016817 hydrolase activity, acting on acid anhydrides 6.06% (6/99) 2.32 0.001358 0.007408
GO:0006399 tRNA metabolic process 4.04% (4/99) 3.01 0.001642 0.008373
GO:0005840 ribosome 3.03% (3/99) 3.61 0.001998 0.010025
GO:0090304 nucleic acid metabolic process 11.11% (11/99) 1.48 0.002051 0.010125
GO:0000266 mitochondrial fission 1.01% (1/99) 8.66 0.002468 0.011995
GO:0097177 mitochondrial ribosome binding 1.01% (1/99) 8.57 0.002633 0.012596
GO:0003735 structural constituent of ribosome 3.03% (3/99) 3.39 0.003106 0.014634
GO:0000408 EKC/KEOPS complex 1.01% (1/99) 7.98 0.003946 0.018319
GO:0031307 obsolete integral component of mitochondrial outer membrane 1.01% (1/99) 7.81 0.004439 0.0203
GO:0031416 NatB complex 1.01% (1/99) 7.76 0.004603 0.020746
GO:0035639 purine ribonucleoside triphosphate binding 12.12% (12/99) 1.2 0.00612 0.02719
GO:0008152 metabolic process 26.26% (26/99) 0.71 0.006366 0.027495
GO:0044238 primary metabolic process 24.24% (24/99) 0.75 0.006341 0.027777
GO:0071704 organic substance metabolic process 25.25% (25/99) 0.72 0.006766 0.028823
GO:0006139 nucleobase-containing compound metabolic process 11.11% (11/99) 1.24 0.006879 0.028911
GO:0010960 magnesium ion homeostasis 1.01% (1/99) 6.84 0.008695 0.036053
GO:0005779 obsolete integral component of peroxisomal membrane 1.01% (1/99) 6.64 0.01 0.039873
GO:0016559 peroxisome fission 1.01% (1/99) 6.64 0.01 0.039873
GO:0016788 hydrolase activity, acting on ester bonds 6.06% (6/99) 1.73 0.009766 0.039962
GO:0044249 cellular biosynthetic process 8.08% (8/99) 1.42 0.010267 0.040419
GO:0046483 heterocycle metabolic process 11.11% (11/99) 1.14 0.011186 0.043484
GO:0005198 structural molecule activity 3.03% (3/99) 2.67 0.012148 0.04664
GO:0006725 cellular aromatic compound metabolic process 11.11% (11/99) 1.11 0.013099 0.04968
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (99) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms