Coexpression cluster: Cluster_4204 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034641 cellular nitrogen compound metabolic process 18.89% (34/180) 1.82 0.0 0.0
GO:0046483 heterocycle metabolic process 17.78% (32/180) 1.82 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 17.78% (32/180) 1.75 0.0 0.0
GO:0008152 metabolic process 33.89% (61/180) 1.08 0.0 1e-06
GO:0006725 cellular aromatic compound metabolic process 16.67% (30/180) 1.69 0.0 2e-06
GO:0006139 nucleobase-containing compound metabolic process 15.56% (28/180) 1.73 0.0 3e-06
GO:0071704 organic substance metabolic process 31.67% (57/180) 1.05 0.0 4e-06
GO:0008150 biological_process 46.67% (84/180) 0.75 0.0 6e-06
GO:0044237 cellular metabolic process 26.11% (47/180) 1.15 0.0 8e-06
GO:0044238 primary metabolic process 29.44% (53/180) 1.03 0.0 1.3e-05
GO:0006807 nitrogen compound metabolic process 25.56% (46/180) 1.08 1e-06 4e-05
GO:0005575 cellular_component 35.56% (64/180) 0.83 1e-06 5.7e-05
GO:0090304 nucleic acid metabolic process 12.78% (23/180) 1.68 1e-06 6.2e-05
GO:0009987 cellular process 33.33% (60/180) 0.86 1e-06 7.3e-05
GO:0110165 cellular anatomical entity 32.22% (58/180) 0.87 2e-06 8.8e-05
GO:0043227 membrane-bounded organelle 17.22% (31/180) 1.29 4e-06 0.000156
GO:0043226 organelle 18.89% (34/180) 1.21 4e-06 0.000156
GO:0043231 intracellular membrane-bounded organelle 17.22% (31/180) 1.3 3e-06 0.000159
GO:0043229 intracellular organelle 18.89% (34/180) 1.21 4e-06 0.000165
GO:0004141 dethiobiotin synthase activity 1.11% (2/180) 7.8 3.9e-05 0.001523
GO:0016071 mRNA metabolic process 3.89% (7/180) 2.75 9.6e-05 0.002812
GO:0033875 ribonucleoside bisphosphate metabolic process 2.22% (4/180) 4.11 9.5e-05 0.002885
GO:0034032 purine nucleoside bisphosphate metabolic process 2.22% (4/180) 4.11 9.5e-05 0.002885
GO:0033865 nucleoside bisphosphate metabolic process 2.22% (4/180) 4.11 9.5e-05 0.002885
GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity 1.11% (2/180) 7.18 9.2e-05 0.00314
GO:1990446 U1 snRNP binding 1.11% (2/180) 7.21 8.8e-05 0.003141
GO:0070990 snRNP binding 1.11% (2/180) 7.21 8.8e-05 0.003141
GO:0044249 cellular biosynthetic process 8.89% (16/180) 1.56 0.000126 0.003542
GO:0016070 RNA metabolic process 7.78% (14/180) 1.68 0.000145 0.003951
GO:0035250 UDP-galactosyltransferase activity 1.11% (2/180) 6.48 0.000244 0.005502
GO:0046481 digalactosyldiacylglycerol synthase activity 1.11% (2/180) 6.48 0.000244 0.005502
GO:0019374 galactolipid metabolic process 1.11% (2/180) 6.48 0.000244 0.005502
GO:0019375 galactolipid biosynthetic process 1.11% (2/180) 6.48 0.000244 0.005502
GO:0098588 bounding membrane of organelle 3.89% (7/180) 2.52 0.000258 0.005651
GO:0043170 macromolecule metabolic process 20.0% (36/180) 0.88 0.000239 0.006077
GO:0003674 molecular_function 48.33% (87/180) 0.45 0.000235 0.006174
GO:0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity 1.11% (2/180) 6.35 0.000292 0.00622
GO:0016882 cyclo-ligase activity 1.11% (2/180) 6.25 0.000336 0.006624
GO:1901576 organic substance biosynthetic process 8.89% (16/180) 1.44 0.00032 0.00664
GO:0006099 tricarboxylic acid cycle 1.67% (3/180) 4.52 0.00033 0.006668
GO:0009056 catabolic process 6.11% (11/180) 1.75 0.000497 0.009573
GO:0009058 biosynthetic process 8.89% (16/180) 1.36 0.000559 0.009807
GO:0031090 organelle membrane 4.44% (8/180) 2.12 0.000575 0.009863
GO:0009102 biotin biosynthetic process 1.11% (2/180) 5.88 0.000552 0.009905
GO:0006768 biotin metabolic process 1.11% (2/180) 5.88 0.000552 0.009905
GO:0044255 cellular lipid metabolic process 5.0% (9/180) 1.98 0.000543 0.010207
GO:0009150 purine ribonucleotide metabolic process 2.78% (5/180) 2.88 0.000659 0.011064
GO:0008964 phosphoenolpyruvate carboxylase activity 1.11% (2/180) 5.73 0.000686 0.01127
GO:0003723 RNA binding 6.67% (12/180) 1.6 0.000716 0.011522
GO:0000375 RNA splicing, via transesterification reactions 2.22% (4/180) 3.3 0.000795 0.012057
GO:0106068 SUMO ligase complex 1.11% (2/180) 5.59 0.000833 0.01217
GO:0030915 Smc5-Smc6 complex 1.11% (2/180) 5.59 0.000833 0.01217
GO:0003676 nucleic acid binding 13.33% (24/180) 1.02 0.00079 0.01222
GO:0015977 carbon fixation 1.11% (2/180) 5.63 0.000786 0.012405
GO:0009507 chloroplast 3.33% (6/180) 2.46 0.000871 0.012499
GO:0008610 lipid biosynthetic process 3.89% (7/180) 2.2 0.000933 0.013139
GO:0009536 plastid 3.33% (6/180) 2.42 0.001001 0.013849
GO:0004611 phosphoenolpyruvate carboxykinase activity 1.11% (2/180) 5.34 0.001169 0.015373
GO:0009259 ribonucleotide metabolic process 2.78% (5/180) 2.68 0.001228 0.015381
GO:0090734 site of DNA damage 1.11% (2/180) 5.31 0.001211 0.015415
GO:0035861 site of double-strand break 1.11% (2/180) 5.31 0.001211 0.015415
GO:1901575 organic substance catabolic process 5.56% (10/180) 1.69 0.001251 0.015418
GO:0019637 organophosphate metabolic process 4.44% (8/180) 1.97 0.001156 0.015459
GO:0048827 phyllome development 1.11% (2/180) 5.25 0.001313 0.015461
GO:0048366 leaf development 1.11% (2/180) 5.25 0.001313 0.015461
GO:1901135 carbohydrate derivative metabolic process 3.89% (7/180) 2.15 0.001141 0.015517
GO:0015074 DNA integration 2.78% (5/180) 2.66 0.0013 0.015775
GO:0009057 macromolecule catabolic process 3.89% (7/180) 2.11 0.001366 0.015854
GO:0008380 RNA splicing 2.22% (4/180) 3.07 0.001428 0.016327
GO:0019693 ribose phosphate metabolic process 2.78% (5/180) 2.62 0.001468 0.016548
GO:0015936 coenzyme A metabolic process 1.11% (2/180) 5.14 0.001544 0.017155
GO:0003824 catalytic activity 27.22% (49/180) 0.59 0.001636 0.017927
GO:0006396 RNA processing 4.44% (8/180) 1.88 0.001659 0.017932
GO:0006163 purine nucleotide metabolic process 2.78% (5/180) 2.5 0.002074 0.02211
GO:0002161 aminoacyl-tRNA editing activity 1.11% (2/180) 4.9 0.002133 0.02244
GO:0016755 aminoacyltransferase activity 2.78% (5/180) 2.47 0.0023 0.023878
GO:1901362 organic cyclic compound biosynthetic process 4.44% (8/180) 1.79 0.002433 0.024931
GO:0072521 purine-containing compound metabolic process 2.78% (5/180) 2.41 0.002706 0.027021
GO:0006259 DNA metabolic process 5.0% (9/180) 1.64 0.002747 0.027092
GO:0008378 galactosyltransferase activity 1.11% (2/180) 4.73 0.002686 0.027172
GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity 1.11% (2/180) 4.67 0.00292 0.028443
GO:0005634 nucleus 8.33% (15/180) 1.17 0.003015 0.029009
GO:0044281 small molecule metabolic process 6.11% (11/180) 1.36 0.004114 0.03567
GO:0009707 chloroplast outer membrane 1.11% (2/180) 4.41 0.004098 0.035926
GO:0009527 plastid outer membrane 1.11% (2/180) 4.41 0.004098 0.035926
GO:0006629 lipid metabolic process 5.0% (9/180) 1.56 0.003829 0.035966
GO:0072330 monocarboxylic acid biosynthetic process 1.67% (3/180) 3.28 0.003821 0.03632
GO:0043687 post-translational protein modification 3.89% (7/180) 1.82 0.004012 0.036382
GO:0006397 mRNA processing 2.22% (4/180) 2.65 0.004078 0.036559
GO:0016126 sterol biosynthetic process 1.11% (2/180) 4.44 0.003947 0.036635
GO:1901564 organonitrogen compound metabolic process 14.44% (26/180) 0.8 0.003995 0.036656
GO:0009117 nucleotide metabolic process 2.78% (5/180) 2.25 0.004329 0.037125
GO:0006402 mRNA catabolic process 1.67% (3/180) 3.19 0.004562 0.037495
GO:0006753 nucleoside phosphate metabolic process 2.78% (5/180) 2.24 0.004517 0.037516
GO:0032991 protein-containing complex 9.44% (17/180) 1.03 0.004436 0.037638
GO:0022904 respiratory electron transport chain 1.11% (2/180) 4.34 0.004514 0.03789
GO:0006779 porphyrin-containing compound biosynthetic process 1.11% (2/180) 4.3 0.004811 0.039134
GO:0003713 transcription coactivator activity 1.11% (2/180) 4.25 0.005117 0.040373
GO:0009555 pollen development 0.56% (1/180) 7.62 0.00508 0.040486
GO:0097159 organic cyclic compound binding 21.67% (39/180) 0.59 0.00519 0.040545
GO:0005488 binding 31.11% (56/180) 0.46 0.005062 0.040754
GO:0009060 aerobic respiration 1.11% (2/180) 4.23 0.005287 0.0409
GO:0048046 apoplast 1.11% (2/180) 4.21 0.005431 0.041606
GO:0071824 protein-DNA complex organization 2.22% (4/180) 2.51 0.005651 0.042463
GO:0045333 cellular respiration 1.11% (2/180) 4.18 0.005607 0.042535
GO:0031903 microbody membrane 1.11% (2/180) 4.15 0.005814 0.042874
GO:0005778 peroxisomal membrane 1.11% (2/180) 4.15 0.005814 0.042874
GO:0043603 amide metabolic process 2.78% (5/180) 2.14 0.005911 0.043182
GO:0043933 protein-containing complex organization 3.33% (6/180) 1.89 0.006159 0.044585
GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway 0.56% (1/180) 7.31 0.006272 0.044984
GO:0016879 ligase activity, forming carbon-nitrogen bonds 1.67% (3/180) 2.99 0.006747 0.045115
GO:0099402 plant organ development 1.11% (2/180) 4.05 0.006711 0.045259
GO:0009932 cell tip growth 0.56% (1/180) 7.25 0.006569 0.045466
GO:0009846 pollen germination 0.56% (1/180) 7.25 0.006569 0.045466
GO:0009860 pollen tube growth 0.56% (1/180) 7.25 0.006569 0.045466
GO:0048588 developmental cell growth 0.56% (1/180) 7.25 0.006569 0.045466
GO:0016746 acyltransferase activity 3.89% (7/180) 1.68 0.006708 0.045628
GO:0044271 cellular nitrogen compound biosynthetic process 4.44% (8/180) 1.55 0.006672 0.045774
GO:1990234 transferase complex 3.33% (6/180) 1.85 0.007045 0.046321
GO:0016874 ligase activity 2.78% (5/180) 2.08 0.007003 0.046429
GO:0006401 RNA catabolic process 1.67% (3/180) 2.95 0.007253 0.047293
GO:0033014 tetrapyrrole biosynthetic process 1.11% (2/180) 3.98 0.007364 0.047627
GO:0045550 geranylgeranyl reductase activity 0.56% (1/180) 7.06 0.007462 0.047864
GO:0016567 protein ubiquitination 2.78% (5/180) 2.05 0.007729 0.048399
GO:0008194 UDP-glycosyltransferase activity 2.78% (5/180) 2.05 0.00769 0.048542
GO:1901566 organonitrogen compound biosynthetic process 3.89% (7/180) 1.65 0.007669 0.048798
GO:0031625 ubiquitin protein ligase binding 1.11% (2/180) 3.91 0.00808 0.049037
GO:0005988 lactose metabolic process 0.56% (1/180) 6.95 0.008056 0.049274
GO:0005990 lactose catabolic process 0.56% (1/180) 6.95 0.008056 0.049274
GO:0052742 phosphatidylinositol kinase activity 1.11% (2/180) 3.92 0.007976 0.049549
GO:0055086 nucleobase-containing small molecule metabolic process 2.78% (5/180) 2.02 0.008244 0.049655
GO:0140961 cellular detoxification of metal ion 0.56% (1/180) 6.62 0.010134 0.049664
GO:0071585 detoxification of cadmium ion 0.56% (1/180) 6.62 0.010134 0.049664
GO:0010273 detoxification of copper ion 0.56% (1/180) 6.62 0.010134 0.049664
GO:0098849 cellular detoxification of cadmium ion 0.56% (1/180) 6.62 0.010134 0.049664
GO:0061687 detoxification of inorganic compound 0.56% (1/180) 6.62 0.010134 0.049664
GO:1902494 catalytic complex 4.44% (8/180) 1.44 0.01022 0.049774
GO:0080044 quercetin 7-O-glucosyltransferase activity 1.11% (2/180) 3.83 0.00897 0.049841
GO:0080043 quercetin 3-O-glucosyltransferase activity 1.11% (2/180) 3.83 0.00897 0.049841
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (180) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms