Coexpression cluster: Cluster_2615 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009863 salicylic acid mediated signaling pathway 2.91% (3/103) 7.62 1e-06 0.000124
GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway 2.91% (3/103) 7.62 1e-06 0.000124
GO:2000031 regulation of salicylic acid mediated signaling pathway 2.91% (3/103) 6.5 6e-06 0.000644
GO:2000022 regulation of jasmonic acid mediated signaling pathway 2.91% (3/103) 6.55 5e-06 0.000769
GO:0019344 cysteine biosynthetic process 1.94% (2/103) 5.97 0.00049 0.016973
GO:0042742 defense response to bacterium 2.91% (3/103) 4.43 0.000392 0.017625
GO:0009617 response to bacterium 2.91% (3/103) 4.43 0.000392 0.017625
GO:0006535 cysteine biosynthetic process from serine 1.94% (2/103) 6.05 0.000439 0.017975
GO:0006790 sulfur compound metabolic process 3.88% (4/103) 3.48 0.000487 0.018266
GO:0031976 plastid thylakoid 1.94% (2/103) 5.77 0.000648 0.019425
GO:0009534 chloroplast thylakoid 1.94% (2/103) 5.77 0.000648 0.019425
GO:0044272 sulfur compound biosynthetic process 2.91% (3/103) 4.15 0.000693 0.019497
GO:0006534 cysteine metabolic process 1.94% (2/103) 5.67 0.00074 0.0196
GO:0023051 regulation of signaling 2.91% (3/103) 4.48 0.000355 0.019967
GO:0009539 photosystem II reaction center 0.97% (1/103) 10.19 0.000857 0.021418
GO:0010646 regulation of cell communication 2.91% (3/103) 4.48 0.000354 0.022735
GO:0006563 L-serine metabolic process 1.94% (2/103) 5.47 0.000981 0.02323
GO:0009966 regulation of signal transduction 2.91% (3/103) 4.49 0.000347 0.026035
GO:0004124 cysteine synthase activity 1.94% (2/103) 6.32 0.000303 0.027272
GO:0004163 diphosphomevalonate decarboxylase activity 0.97% (1/103) 9.34 0.001542 0.033033
GO:0006084 acetyl-CoA metabolic process 1.94% (2/103) 5.15 0.001513 0.034051
GO:0000097 sulfur amino acid biosynthetic process 1.94% (2/103) 5.08 0.001671 0.034177
GO:0000096 sulfur amino acid metabolic process 1.94% (2/103) 4.95 0.001988 0.037268
GO:0048583 regulation of response to stimulus 2.91% (3/103) 3.59 0.002076 0.037362
GO:0009579 thylakoid 1.94% (2/103) 4.96 0.001967 0.038486
GO:0030906 retromer, cargo-selective complex 0.97% (1/103) 8.7 0.002397 0.041486
GO:0000118 histone deacetylase complex 1.94% (2/103) 4.47 0.003789 0.048712
GO:0045793 positive regulation of cell size 0.97% (1/103) 8.26 0.003252 0.048775
GO:0032877 positive regulation of DNA endoreduplication 0.97% (1/103) 8.26 0.003252 0.048775
GO:2000105 positive regulation of DNA-templated DNA replication 0.97% (1/103) 8.26 0.003252 0.048775
GO:0032875 regulation of DNA endoreduplication 0.97% (1/103) 7.99 0.003935 0.049186
GO:0009069 serine family amino acid metabolic process 1.94% (2/103) 4.4 0.004161 0.049273
GO:0045550 geranylgeranyl reductase activity 0.97% (1/103) 7.87 0.004276 0.049342
GO:0009536 plastid 3.88% (4/103) 2.64 0.00406 0.049377
GO:0006637 acyl-CoA metabolic process 1.94% (2/103) 4.48 0.003761 0.049774
GO:0035383 thioester metabolic process 1.94% (2/103) 4.48 0.003761 0.049774
GO:0009070 serine family amino acid biosynthetic process 1.94% (2/103) 4.65 0.002993 0.049881
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (103) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms