Coexpression cluster: Cluster_4615 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043632 modification-dependent macromolecule catabolic process 8.93% (5/56) 4.1 1.2e-05 0.001779
GO:0019941 modification-dependent protein catabolic process 8.93% (5/56) 4.16 1e-05 0.002189
GO:0051603 proteolysis involved in protein catabolic process 8.93% (5/56) 3.82 3e-05 0.002714
GO:0010498 proteasomal protein catabolic process 7.14% (4/56) 4.45 3.6e-05 0.00274
GO:0006511 ubiquitin-dependent protein catabolic process 8.93% (5/56) 4.3 6e-06 0.002775
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 7.14% (4/56) 4.59 2.5e-05 0.002841
GO:0030163 protein catabolic process 7.14% (4/56) 4.33 5e-05 0.003269
GO:0009057 macromolecule catabolic process 8.93% (5/56) 3.3 0.000157 0.007948
GO:0006508 proteolysis 10.71% (6/56) 2.92 0.000143 0.008132
GO:0000045 autophagosome assembly 3.57% (2/56) 6.35 0.000289 0.011993
GO:1905037 autophagosome organization 3.57% (2/56) 6.35 0.000289 0.011993
GO:0007033 vacuole organization 3.57% (2/56) 6.01 0.000462 0.017565
GO:0009056 catabolic process 10.71% (6/56) 2.56 0.00053 0.01859
GO:0061024 membrane organization 5.36% (3/56) 4.23 0.000577 0.018808
GO:0050577 GDP-L-fucose synthase activity 1.79% (1/56) 10.39 0.000745 0.02124
GO:0005575 cellular_component 39.29% (22/56) 0.97 0.000704 0.021393
GO:1901981 phosphatidylinositol phosphate binding 3.57% (2/56) 4.91 0.002069 0.02483
GO:1901565 organonitrogen compound catabolic process 7.14% (4/56) 3.22 0.00093 0.024941
GO:1903829 positive regulation of protein localization 1.79% (1/56) 9.07 0.001862 0.024975
GO:0070201 regulation of establishment of protein localization 1.79% (1/56) 9.07 0.001862 0.024975
GO:0051223 regulation of protein transport 1.79% (1/56) 9.07 0.001862 0.024975
GO:0032388 positive regulation of intracellular transport 1.79% (1/56) 9.07 0.001862 0.024975
GO:0005245 voltage-gated calcium channel activity 1.79% (1/56) 8.93 0.002048 0.025243
GO:0031468 nuclear membrane reassembly 1.79% (1/56) 8.93 0.002048 0.025243
GO:0051050 positive regulation of transport 1.79% (1/56) 9.0 0.001955 0.025473
GO:0005634 nucleus 14.29% (8/56) 1.95 0.001015 0.025716
GO:0010286 heat acclimation 1.79% (1/56) 8.75 0.002327 0.02653
GO:0008150 biological_process 46.43% (26/56) 0.74 0.002273 0.026581
GO:0070370 cellular heat acclimation 1.79% (1/56) 9.8 0.001118 0.026825
GO:0051222 positive regulation of protein transport 1.79% (1/56) 9.14 0.001769 0.026891
GO:0033157 regulation of intracellular protein transport 1.79% (1/56) 9.14 0.001769 0.026891
GO:0070861 regulation of protein exit from endoplasmic reticulum 1.79% (1/56) 9.14 0.001769 0.026891
GO:0070863 positive regulation of protein exit from endoplasmic reticulum 1.79% (1/56) 9.14 0.001769 0.026891
GO:0090316 positive regulation of intracellular protein transport 1.79% (1/56) 9.14 0.001769 0.026891
GO:1904951 positive regulation of establishment of protein localization 1.79% (1/56) 9.14 0.001769 0.026891
GO:0006996 organelle organization 8.93% (5/56) 2.66 0.001181 0.026918
GO:0016050 vesicle organization 3.57% (2/56) 4.72 0.002676 0.027729
GO:1901575 organic substance catabolic process 8.93% (5/56) 2.37 0.002808 0.027833
GO:0042776 proton motive force-driven mitochondrial ATP synthesis 1.79% (1/56) 8.44 0.002885 0.02799
GO:0030120 vesicle coat 3.57% (2/56) 4.73 0.002644 0.028034
GO:0050619 phytochromobilin:ferredoxin oxidoreductase activity 1.79% (1/56) 8.48 0.002792 0.028292
GO:0061709 reticulophagy 1.79% (1/56) 8.58 0.002606 0.028294
GO:0071709 membrane assembly 1.79% (1/56) 8.58 0.002606 0.028294
GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) 1.79% (1/56) 8.35 0.003071 0.029172
GO:0005753 mitochondrial proton-transporting ATP synthase complex 1.79% (1/56) 8.26 0.003257 0.0297
GO:0045259 proton-transporting ATP synthase complex 1.79% (1/56) 8.26 0.003257 0.0297
GO:0006886 intracellular protein transport 5.36% (3/56) 3.32 0.003457 0.030313
GO:0005261 monoatomic cation channel activity 3.57% (2/56) 5.19 0.001417 0.030758
GO:0017111 ribonucleoside triphosphate phosphatase activity 7.14% (4/56) 2.69 0.003445 0.030806
GO:0016043 cellular component organization 10.71% (6/56) 2.02 0.003585 0.030846
GO:0035091 phosphatidylinositol binding 3.57% (2/56) 4.48 0.0037 0.031247
GO:0043227 membrane-bounded organelle 19.64% (11/56) 1.47 0.001666 0.031649
GO:0008289 lipid binding 5.36% (3/56) 3.71 0.001602 0.031769
GO:0030117 membrane coat 3.57% (2/56) 4.46 0.003836 0.031807
GO:0043231 intracellular membrane-bounded organelle 19.64% (11/56) 1.49 0.001569 0.032515
GO:0032880 regulation of protein localization 1.79% (1/56) 7.9 0.004185 0.034078
GO:0016462 pyrophosphatase activity 7.14% (4/56) 2.6 0.004373 0.03438
GO:0070925 organelle assembly 3.57% (2/56) 4.36 0.004347 0.034778
GO:0043226 organelle 19.64% (11/56) 1.27 0.005048 0.034877
GO:0010024 phytochromobilin biosynthetic process 1.79% (1/56) 7.66 0.004927 0.035107
GO:0051202 phytochromobilin metabolic process 1.79% (1/56) 7.66 0.004927 0.035107
GO:0006810 transport 12.5% (7/56) 1.75 0.004561 0.035249
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.14% (4/56) 2.57 0.004643 0.035285
GO:0043229 intracellular organelle 19.64% (11/56) 1.27 0.005044 0.035387
GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor 1.79% (1/56) 7.69 0.004835 0.035557
GO:0016817 hydrolase activity, acting on acid anhydrides 7.14% (4/56) 2.56 0.0048 0.035884
GO:0003400 regulation of COPII vesicle coating 1.79% (1/56) 7.56 0.005298 0.036059
GO:0051234 establishment of localization 12.5% (7/56) 1.69 0.005802 0.038905
GO:0071840 cellular component organization or biogenesis 10.71% (6/56) 1.86 0.006056 0.040022
GO:0098796 membrane protein complex 5.36% (3/56) 2.94 0.007178 0.040409
GO:0016237 microautophagy 1.79% (1/56) 7.12 0.007151 0.040759
GO:0034727 piecemeal microautophagy of the nucleus 1.79% (1/56) 7.12 0.007151 0.040759
GO:1990414 replication-born double-strand break repair via sister chromatid exchange 1.79% (1/56) 7.12 0.007151 0.040759
GO:0032386 regulation of intracellular transport 1.79% (1/56) 7.12 0.007151 0.040759
GO:0005543 phospholipid binding 3.57% (2/56) 3.95 0.0076 0.040773
GO:0044805 obsolete late nucleophagy 1.79% (1/56) 7.05 0.007521 0.040827
GO:0008541 proteasome regulatory particle, lid subcomplex 1.79% (1/56) 7.01 0.007706 0.040858
GO:0005216 monoatomic ion channel activity 3.57% (2/56) 3.96 0.007465 0.041011
GO:0032266 phosphatidylinositol-3-phosphate binding 1.79% (1/56) 7.07 0.007428 0.041308
GO:0005262 calcium channel activity 1.79% (1/56) 7.28 0.00641 0.041757
GO:0015031 protein transport 5.36% (3/56) 2.99 0.006556 0.042108
GO:0044877 protein-containing complex binding 5.36% (3/56) 2.87 0.008171 0.042342
GO:0034338 short-chain carboxylesterase activity 1.79% (1/56) 7.14 0.007058 0.042348
GO:0071702 organic substance transport 7.14% (4/56) 2.34 0.008131 0.042617
GO:0048040 UDP-glucuronate decarboxylase activity 1.79% (1/56) 6.87 0.008538 0.042783
GO:0042732 D-xylose metabolic process 1.79% (1/56) 6.87 0.008538 0.042783
GO:0051179 localization 12.5% (7/56) 1.63 0.00705 0.042862
GO:0001046 core promoter sequence-specific DNA binding 1.79% (1/56) 7.16 0.006966 0.042923
GO:0050897 cobalt ion binding 1.79% (1/56) 7.18 0.006873 0.042933
GO:0071763 nuclear membrane organization 1.79% (1/56) 7.2 0.00678 0.042943
GO:0003674 molecular_function 51.79% (29/56) 0.55 0.008531 0.043709
GO:0060341 regulation of cellular localization 1.79% (1/56) 6.72 0.009461 0.045415
GO:0008878 glucose-1-phosphate adenylyltransferase activity 1.79% (1/56) 6.73 0.009369 0.04545
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.79% (1/56) 6.73 0.009369 0.04545
GO:0016469 proton-transporting two-sector ATPase complex 1.79% (1/56) 6.75 0.009277 0.045981
GO:0005832 chaperonin-containing T-complex 1.79% (1/56) 6.66 0.009831 0.046214
GO:0008278 cohesin complex 1.79% (1/56) 6.66 0.009831 0.046214
GO:0070628 proteasome binding 1.79% (1/56) 6.63 0.010015 0.046602
GO:0022607 cellular component assembly 5.36% (3/56) 2.74 0.010508 0.047915
GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane 1.79% (1/56) 6.46 0.011306 0.048184
GO:0046618 xenobiotic export from cell 1.79% (1/56) 6.46 0.011306 0.048184
GO:0042908 xenobiotic transport 1.79% (1/56) 6.46 0.011306 0.048184
GO:0005978 glycogen biosynthetic process 1.79% (1/56) 6.57 0.010476 0.048256
GO:0000325 plant-type vacuole 1.79% (1/56) 6.48 0.011122 0.048766
GO:0016192 vesicle-mediated transport 5.36% (3/56) 2.71 0.011023 0.0488
GO:0016787 hydrolase activity 14.29% (8/56) 1.38 0.010999 0.04917
GO:0045184 establishment of protein localization 5.36% (3/56) 2.68 0.01167 0.049272
GO:0101031 protein folding chaperone complex 1.79% (1/56) 6.51 0.010938 0.049382
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (56) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms