Coexpression cluster: Cluster_685 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010962 regulation of glucan biosynthetic process 4.17% (3/72) 9.66 0.0 0.0
GO:0032950 regulation of beta-glucan metabolic process 4.17% (3/72) 9.66 0.0 0.0
GO:2001006 regulation of cellulose biosynthetic process 4.17% (3/72) 9.66 0.0 0.0
GO:0032951 regulation of beta-glucan biosynthetic process 4.17% (3/72) 9.66 0.0 0.0
GO:0051211 anisotropic cell growth 4.17% (3/72) 9.66 0.0 0.0
GO:0032885 regulation of polysaccharide biosynthetic process 4.17% (3/72) 9.66 0.0 0.0
GO:0010330 cellulose synthase complex 4.17% (3/72) 9.66 0.0 0.0
GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing 6.94% (5/72) 6.44 0.0 1e-06
GO:0016441 post-transcriptional gene silencing 6.94% (5/72) 6.44 0.0 1e-06
GO:0043255 regulation of carbohydrate biosynthetic process 4.17% (3/72) 8.88 0.0 1e-06
GO:0032881 regulation of polysaccharide metabolic process 4.17% (3/72) 8.78 0.0 1e-06
GO:0031047 regulatory ncRNA-mediated gene silencing 6.94% (5/72) 5.55 0.0 2e-06
GO:0006109 regulation of carbohydrate metabolic process 4.17% (3/72) 7.88 0.0 7e-06
GO:0032559 adenyl ribonucleotide binding 25.0% (18/72) 1.98 0.0 8e-06
GO:0030554 adenyl nucleotide binding 25.0% (18/72) 1.93 1e-06 1.4e-05
GO:0097159 organic cyclic compound binding 37.5% (27/72) 1.39 1e-06 1.6e-05
GO:0032553 ribonucleotide binding 25.0% (18/72) 1.89 1e-06 1.6e-05
GO:0032555 purine ribonucleotide binding 25.0% (18/72) 1.9 1e-06 1.6e-05
GO:0097367 carbohydrate derivative binding 25.0% (18/72) 1.88 1e-06 1.6e-05
GO:0016049 cell growth 4.17% (3/72) 7.35 1e-06 1.7e-05
GO:0040007 growth 4.17% (3/72) 7.18 1e-06 1.9e-05
GO:0017076 purine nucleotide binding 25.0% (18/72) 1.85 2e-06 2.1e-05
GO:0004521 RNA endonuclease activity 6.94% (5/72) 4.64 2e-06 2.6e-05
GO:0010608 post-transcriptional regulation of gene expression 6.94% (5/72) 4.57 3e-06 3.1e-05
GO:0000166 nucleotide binding 25.0% (18/72) 1.78 3e-06 3.3e-05
GO:1901265 nucleoside phosphate binding 25.0% (18/72) 1.78 3e-06 3.3e-05
GO:0043168 anion binding 25.0% (18/72) 1.76 4e-06 4.1e-05
GO:1901363 heterocyclic compound binding 25.0% (18/72) 1.74 4e-06 4.5e-05
GO:0036094 small molecule binding 25.0% (18/72) 1.73 5e-06 4.8e-05
GO:0010337 regulation of salicylic acid metabolic process 4.17% (3/72) 6.44 6e-06 6.1e-05
GO:0080142 regulation of salicylic acid biosynthetic process 4.17% (3/72) 6.44 6e-06 6.1e-05
GO:0004540 RNA nuclease activity 6.94% (5/72) 4.25 7e-06 6.6e-05
GO:0004519 endonuclease activity 6.94% (5/72) 4.26 7e-06 6.7e-05
GO:0043531 ADP binding 11.11% (8/72) 2.98 8e-06 7.4e-05
GO:0010629 negative regulation of gene expression 6.94% (5/72) 4.08 1.3e-05 0.00011
GO:0010565 regulation of cellular ketone metabolic process 4.17% (3/72) 6.03 1.5e-05 0.000122
GO:0009889 regulation of biosynthetic process 15.28% (11/72) 2.27 1.6e-05 0.000126
GO:0031326 regulation of cellular biosynthetic process 15.28% (11/72) 2.27 1.6e-05 0.000128
GO:0062012 regulation of small molecule metabolic process 4.17% (3/72) 5.9 1.9e-05 0.000146
GO:0008150 biological_process 51.39% (37/72) 0.89 2e-05 0.000149
GO:0005488 binding 44.44% (32/72) 0.98 3.2e-05 0.000232
GO:0031323 regulation of cellular metabolic process 15.28% (11/72) 2.16 3.3e-05 0.000233
GO:0019222 regulation of metabolic process 15.28% (11/72) 2.11 4.4e-05 0.000297
GO:0010558 negative regulation of macromolecule biosynthetic process 6.94% (5/72) 3.71 4.3e-05 0.000297
GO:0009890 negative regulation of biosynthetic process 6.94% (5/72) 3.67 5e-05 0.000324
GO:0031327 negative regulation of cellular biosynthetic process 6.94% (5/72) 3.67 4.9e-05 0.000325
GO:0004518 nuclease activity 6.94% (5/72) 3.63 5.6e-05 0.000355
GO:0010605 negative regulation of macromolecule metabolic process 6.94% (5/72) 3.54 7.6e-05 0.000468
GO:0031324 negative regulation of cellular metabolic process 6.94% (5/72) 3.52 8.1e-05 0.000494
GO:0009892 negative regulation of metabolic process 6.94% (5/72) 3.51 8.4e-05 0.000496
GO:0009607 response to biotic stimulus 11.11% (8/72) 2.48 9.7e-05 0.000526
GO:0044419 biological process involved in interspecies interaction between organisms 11.11% (8/72) 2.48 9.6e-05 0.000528
GO:0043207 response to external biotic stimulus 11.11% (8/72) 2.48 9.5e-05 0.000535
GO:0051707 response to other organism 11.11% (8/72) 2.48 9.5e-05 0.000545
GO:0098542 defense response to other organism 11.11% (8/72) 2.48 9.5e-05 0.000545
GO:0006952 defense response 11.11% (8/72) 2.4 0.000138 0.000732
GO:0009605 response to external stimulus 11.11% (8/72) 2.39 0.000148 0.000772
GO:0005516 calmodulin binding 4.17% (3/72) 4.85 0.000167 0.000857
GO:0140098 catalytic activity, acting on RNA 8.33% (6/72) 2.84 0.000201 0.001013
GO:0050794 regulation of cellular process 16.67% (12/72) 1.73 0.000244 0.001206
GO:0048523 negative regulation of cellular process 6.94% (5/72) 3.14 0.000275 0.001339
GO:0043167 ion binding 25.0% (18/72) 1.28 0.00029 0.001387
GO:0048519 negative regulation of biological process 6.94% (5/72) 3.11 0.000298 0.001406
GO:0050789 regulation of biological process 16.67% (12/72) 1.65 0.000381 0.001767
GO:0065007 biological regulation 16.67% (12/72) 1.55 0.000715 0.003217
GO:0042626 ATPase-coupled transmembrane transporter activity 5.56% (4/72) 3.33 0.000711 0.003249
GO:0015399 primary active transmembrane transporter activity 5.56% (4/72) 3.23 0.000917 0.004066
GO:0006950 response to stress 12.5% (9/72) 1.8 0.001084 0.004736
GO:0140359 ABC-type transporter activity 4.17% (3/72) 3.66 0.001783 0.007563
GO:0010556 regulation of macromolecule biosynthetic process 11.11% (8/72) 1.84 0.001764 0.007594
GO:0008017 microtubule binding 4.17% (3/72) 3.64 0.001855 0.00776
GO:0015631 tubulin binding 4.17% (3/72) 3.55 0.002231 0.009202
GO:0005515 protein binding 18.06% (13/72) 1.27 0.002494 0.01001
GO:0050896 response to stimulus 12.5% (9/72) 1.63 0.002473 0.010062
GO:0005524 ATP binding 13.89% (10/72) 1.49 0.002757 0.010917
GO:0002020 protease binding 1.39% (1/72) 8.27 0.00323 0.011843
GO:0000839 Hrd1p ubiquitin ligase ERAD-L complex 1.39% (1/72) 8.27 0.00323 0.011843
GO:0000836 Hrd1p ubiquitin ligase complex 1.39% (1/72) 8.27 0.00323 0.011843
GO:0000835 ER ubiquitin ligase complex 1.39% (1/72) 8.27 0.00323 0.011843
GO:1990381 ubiquitin-specific protease binding 1.39% (1/72) 8.27 0.00323 0.011843
GO:0060255 regulation of macromolecule metabolic process 11.11% (8/72) 1.71 0.003087 0.012063
GO:0140640 catalytic activity, acting on a nucleic acid 8.33% (6/72) 2.05 0.003369 0.012201
GO:1990610 acetolactate synthase regulator activity 1.39% (1/72) 8.17 0.003469 0.012413
GO:0003674 molecular_function 51.39% (37/72) 0.54 0.00381 0.013472
GO:0003984 acetolactate synthase activity 1.39% (1/72) 7.98 0.003946 0.013789
GO:0004357 glutamate-cysteine ligase activity 1.39% (1/72) 7.9 0.004185 0.014453
GO:0035639 purine ribonucleoside triphosphate binding 13.89% (10/72) 1.39 0.004542 0.015505
GO:1990234 transferase complex 5.56% (4/72) 2.58 0.004614 0.015572
GO:0022804 active transmembrane transporter activity 5.56% (4/72) 2.57 0.004781 0.015956
GO:0009099 valine biosynthetic process 1.39% (1/72) 7.5 0.005497 0.018139
GO:0034715 pICln-Sm protein complex 1.39% (1/72) 7.33 0.006212 0.020273
GO:0009097 isoleucine biosynthetic process 1.39% (1/72) 7.27 0.00645 0.020598
GO:0006549 isoleucine metabolic process 1.39% (1/72) 7.27 0.00645 0.020598
GO:0003989 acetyl-CoA carboxylase activity 1.39% (1/72) 7.12 0.007164 0.022635
GO:0051787 misfolded protein binding 1.39% (1/72) 6.86 0.008591 0.026857
GO:0000153 cytoplasmic ubiquitin ligase complex 1.39% (1/72) 6.78 0.009066 0.028047
GO:0008092 cytoskeletal protein binding 4.17% (3/72) 2.8 0.009353 0.028636
GO:0016788 hydrolase activity, acting on ester bonds 6.94% (5/72) 1.93 0.010286 0.031173
GO:0016885 ligase activity, forming carbon-carbon bonds 1.39% (1/72) 6.12 0.014277 0.041571
GO:0009082 branched-chain amino acid biosynthetic process 1.39% (1/72) 6.12 0.014277 0.041571
GO:0016421 CoA carboxylase activity 1.39% (1/72) 6.14 0.014041 0.041701
GO:0006750 glutathione biosynthetic process 1.39% (1/72) 6.14 0.014041 0.041701
GO:0019184 nonribosomal peptide biosynthetic process 1.39% (1/72) 6.07 0.01475 0.04253
GO:0005987 sucrose catabolic process 1.39% (1/72) 5.99 0.015576 0.044057
GO:0004575 sucrose alpha-glucosidase activity 1.39% (1/72) 5.99 0.015576 0.044057
GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity 1.39% (1/72) 5.96 0.01593 0.044633
GO:0004564 beta-fructofuranosidase activity 1.39% (1/72) 5.84 0.017344 0.047696
GO:0090599 alpha-glucosidase activity 1.39% (1/72) 5.85 0.017226 0.047814
GO:0045292 mRNA cis splicing, via spliceosome 1.39% (1/72) 5.77 0.018168 0.049503
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (72) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms