Coexpression cluster: Cluster_3163 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0061077 chaperone-mediated protein folding 5.41% (4/74) 6.53 0.0 6.7e-05
GO:0006457 protein folding 6.76% (5/74) 4.51 3e-06 0.000815
GO:0000413 protein peptidyl-prolyl isomerization 4.05% (3/74) 6.27 9e-06 0.001574
GO:0018208 peptidyl-proline modification 4.05% (3/74) 5.94 1.8e-05 0.001849
GO:0022627 cytosolic small ribosomal subunit 4.05% (3/74) 5.97 1.7e-05 0.002209
GO:0032991 protein-containing complex 17.57% (13/74) 1.92 3.3e-05 0.002847
GO:0015935 small ribosomal subunit 4.05% (3/74) 5.54 4.1e-05 0.003031
GO:0061024 membrane organization 5.41% (4/74) 4.24 6.5e-05 0.003774
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 4.05% (3/74) 5.34 6.1e-05 0.003997
GO:0005575 cellular_component 39.19% (29/74) 0.97 0.000114 0.004944
GO:0015937 coenzyme A biosynthetic process 2.7% (2/74) 7.07 0.000108 0.005085
GO:0016859 cis-trans isomerase activity 4.05% (3/74) 5.07 0.000106 0.005508
GO:0031011 Ino80 complex 2.7% (2/74) 6.5 0.000235 0.009399
GO:0015936 coenzyme A metabolic process 2.7% (2/74) 6.42 0.000265 0.009828
GO:0006518 peptide metabolic process 5.41% (4/74) 3.66 0.000301 0.010444
GO:1901566 organonitrogen compound biosynthetic process 8.11% (6/74) 2.71 0.00033 0.01073
GO:0006906 vesicle fusion 2.7% (2/74) 5.99 0.000475 0.011756
GO:1990904 ribonucleoprotein complex 6.76% (5/74) 2.98 0.00046 0.011958
GO:0005484 SNAP receptor activity 2.7% (2/74) 6.03 0.000453 0.012394
GO:0097346 INO80-type complex 2.7% (2/74) 6.03 0.000449 0.012979
GO:0044391 ribosomal subunit 4.05% (3/74) 4.21 0.000604 0.013077
GO:0016853 isomerase activity 5.41% (4/74) 3.4 0.000592 0.013386
GO:0031201 SNARE complex 2.7% (2/74) 5.86 0.000567 0.013412
GO:0018193 peptidyl-amino acid modification 5.41% (4/74) 3.51 0.000449 0.013732
GO:0010349 L-galactose dehydrogenase activity 1.35% (1/74) 10.4 0.000739 0.015364
GO:0005840 ribosome 4.05% (3/74) 4.03 0.000865 0.016061
GO:0034030 ribonucleoside bisphosphate biosynthetic process 2.7% (2/74) 5.42 0.00104 0.016385
GO:0034033 purine nucleoside bisphosphate biosynthetic process 2.7% (2/74) 5.42 0.00104 0.016385
GO:0033866 nucleoside bisphosphate biosynthetic process 2.7% (2/74) 5.42 0.00104 0.016385
GO:0070603 SWI/SNF superfamily-type complex 2.7% (2/74) 5.56 0.000864 0.016635
GO:0090174 organelle membrane fusion 2.7% (2/74) 5.3 0.001232 0.016854
GO:0043603 amide metabolic process 5.41% (4/74) 3.1 0.001267 0.016896
GO:0022406 membrane docking 2.7% (2/74) 5.22 0.00137 0.016966
GO:0140056 organelle localization by membrane tethering 2.7% (2/74) 5.22 0.00137 0.016966
GO:0019853 L-ascorbic acid biosynthetic process 1.35% (1/74) 10.18 0.000862 0.017234
GO:1904949 ATPase complex 2.7% (2/74) 5.19 0.001427 0.017251
GO:0051747 cytosine C-5 DNA demethylase activity 1.35% (1/74) 9.67 0.001231 0.017297
GO:0035511 obsolete oxidative DNA demethylation 1.35% (1/74) 9.67 0.001231 0.017297
GO:0043734 DNA-N1-methyladenine dioxygenase activity 1.35% (1/74) 9.67 0.001231 0.017297
GO:0110165 cellular anatomical entity 32.43% (24/74) 0.88 0.00154 0.017413
GO:0006807 nitrogen compound metabolic process 25.68% (19/74) 1.09 0.001014 0.017583
GO:0003735 structural constituent of ribosome 4.05% (3/74) 3.8 0.001354 0.017606
GO:1901564 organonitrogen compound metabolic process 20.27% (15/74) 1.29 0.000982 0.017613
GO:0071840 cellular component organization or biogenesis 10.81% (8/74) 1.87 0.001528 0.017654
GO:0061025 membrane fusion 2.7% (2/74) 5.14 0.001523 0.017995
GO:0048284 organelle fusion 2.7% (2/74) 5.09 0.001628 0.018017
GO:0009987 cellular process 33.78% (25/74) 0.87 0.001188 0.018162
GO:0044249 cellular biosynthetic process 10.81% (8/74) 1.84 0.001743 0.018493
GO:0005743 mitochondrial inner membrane 2.7% (2/74) 5.05 0.001731 0.018749
GO:0098796 membrane protein complex 5.41% (4/74) 2.95 0.001858 0.019327
GO:0006412 translation 4.05% (3/74) 3.63 0.001923 0.019603
GO:0043043 peptide biosynthetic process 4.05% (3/74) 3.5 0.002453 0.022381
GO:0043226 organelle 18.92% (14/74) 1.21 0.002421 0.022483
GO:0045793 positive regulation of cell size 1.35% (1/74) 8.74 0.002337 0.022506
GO:2000105 positive regulation of DNA-templated DNA replication 1.35% (1/74) 8.74 0.002337 0.022506
GO:0032877 positive regulation of DNA endoreduplication 1.35% (1/74) 8.74 0.002337 0.022506
GO:0043229 intracellular organelle 18.92% (14/74) 1.21 0.002419 0.02287
GO:0010011 auxin binding 1.35% (1/74) 8.6 0.002583 0.023157
GO:0019866 organelle inner membrane 2.7% (2/74) 4.71 0.002733 0.023683
GO:1990726 Lsm1-7-Pat1 complex 1.35% (1/74) 8.53 0.002706 0.023847
GO:0032875 regulation of DNA endoreduplication 1.35% (1/74) 8.46 0.002828 0.024112
GO:1901576 organic substance biosynthetic process 10.81% (8/74) 1.72 0.002923 0.024511
GO:0052636 arabinosyltransferase activity 1.35% (1/74) 8.29 0.003197 0.026387
GO:0030674 protein-macromolecule adaptor activity 2.7% (2/74) 4.58 0.003263 0.026508
GO:0044238 primary metabolic process 27.03% (20/74) 0.91 0.003316 0.026529
GO:0098800 inner mitochondrial membrane protein complex 2.7% (2/74) 4.55 0.003395 0.026747
GO:0016043 cellular component organization 9.46% (7/74) 1.84 0.003469 0.026924
GO:0052325 cell wall pectin biosynthetic process 1.35% (1/74) 8.03 0.00381 0.02752
GO:0045489 pectin biosynthetic process 1.35% (1/74) 8.03 0.00381 0.02752
GO:0006307 DNA dealkylation involved in DNA repair 1.35% (1/74) 8.03 0.00381 0.02752
GO:0052546 cell wall pectin metabolic process 1.35% (1/74) 8.03 0.00381 0.02752
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 4.05% (3/74) 3.26 0.003897 0.027762
GO:0034032 purine nucleoside bisphosphate metabolic process 2.7% (2/74) 4.4 0.004177 0.027845
GO:0033875 ribonucleoside bisphosphate metabolic process 2.7% (2/74) 4.4 0.004177 0.027845
GO:0033865 nucleoside bisphosphate metabolic process 2.7% (2/74) 4.4 0.004177 0.027845
GO:0009058 biosynthetic process 10.81% (8/74) 1.65 0.003995 0.028074
GO:0005688 U6 snRNP 1.35% (1/74) 8.08 0.003688 0.028201
GO:0051781 positive regulation of cell division 1.35% (1/74) 7.86 0.004301 0.028311
GO:0000149 SNARE binding 2.7% (2/74) 4.41 0.004114 0.028523
GO:0031966 mitochondrial membrane 2.7% (2/74) 4.33 0.004552 0.029223
GO:0097255 R2TP complex 1.35% (1/74) 7.74 0.004669 0.029251
GO:0016050 vesicle organization 2.7% (2/74) 4.32 0.004618 0.029285
GO:0004140 dephospho-CoA kinase activity 1.35% (1/74) 7.78 0.004546 0.029551
GO:0042720 mitochondrial inner membrane peptidase complex 1.35% (1/74) 7.7 0.004791 0.029662
GO:1901336 lactone biosynthetic process 1.35% (1/74) 7.46 0.005649 0.029975
GO:0045039 protein insertion into mitochondrial inner membrane 1.35% (1/74) 7.46 0.005649 0.029975
GO:0006627 protein processing involved in protein targeting to mitochondrion 1.35% (1/74) 7.67 0.004914 0.030062
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 4.05% (3/74) 3.13 0.005036 0.030097
GO:0051082 unfolded protein binding 2.7% (2/74) 4.18 0.005598 0.030324
GO:0005783 endoplasmic reticulum 4.05% (3/74) 3.13 0.005031 0.030417
GO:0008361 regulation of cell size 1.35% (1/74) 7.6 0.005159 0.030486
GO:0043604 amide biosynthetic process 4.05% (3/74) 3.11 0.005232 0.030572
GO:0006875 obsolete intracellular metal ion homeostasis 1.35% (1/74) 7.5 0.005527 0.030573
GO:0019852 L-ascorbic acid metabolic process 1.35% (1/74) 7.5 0.005527 0.030573
GO:0009152 purine ribonucleotide biosynthetic process 2.7% (2/74) 4.18 0.005586 0.030577
GO:0034641 cellular nitrogen compound metabolic process 13.51% (10/74) 1.34 0.005932 0.030848
GO:0006163 purine nucleotide metabolic process 4.05% (3/74) 3.05 0.005895 0.030961
GO:0004103 choline kinase activity 1.35% (1/74) 7.37 0.006016 0.030976
GO:0060090 molecular adaptor activity 2.7% (2/74) 4.21 0.005372 0.031036
GO:0044271 cellular nitrogen compound biosynthetic process 6.76% (5/74) 2.15 0.005493 0.031049
GO:0005198 structural molecule activity 4.05% (3/74) 3.09 0.005481 0.03132
GO:0000455 enzyme-directed rRNA pseudouridine synthesis 1.35% (1/74) 7.29 0.006384 0.032544
GO:0071704 organic substance metabolic process 27.03% (20/74) 0.82 0.006616 0.033399
GO:0031090 organelle membrane 5.41% (4/74) 2.41 0.007038 0.034856
GO:0072521 purine-containing compound metabolic process 4.05% (3/74) 2.96 0.006987 0.034935
GO:0045740 positive regulation of DNA replication 1.35% (1/74) 7.08 0.007362 0.036116
GO:1902494 catalytic complex 6.76% (5/74) 2.04 0.007491 0.036407
GO:0004594 pantothenate kinase activity 1.35% (1/74) 6.9 0.00834 0.038377
GO:0030060 L-malate dehydrogenase activity 1.35% (1/74) 6.9 0.00834 0.038377
GO:0005744 TIM23 mitochondrial import inner membrane translocase complex 1.35% (1/74) 6.9 0.00834 0.038377
GO:0000492 box C/D snoRNP assembly 1.35% (1/74) 6.88 0.008462 0.038598
GO:0098798 mitochondrial protein-containing complex 2.7% (2/74) 3.9 0.008128 0.038778
GO:0019538 protein metabolic process 14.86% (11/74) 1.2 0.008061 0.038813
GO:0004305 ethanolamine kinase activity 1.35% (1/74) 6.92 0.008218 0.038847
GO:0019773 proteasome core complex, alpha-subunit complex 1.35% (1/74) 6.84 0.008706 0.039366
GO:0034982 mitochondrial protein processing 1.35% (1/74) 6.82 0.008828 0.039574
GO:0006164 purine nucleotide biosynthetic process 2.7% (2/74) 3.81 0.009081 0.040019
GO:0031118 rRNA pseudouridine synthesis 1.35% (1/74) 6.76 0.009194 0.040177
GO:0000491 small nucleolar ribonucleoprotein complex assembly 1.35% (1/74) 6.78 0.009072 0.040321
GO:0009117 nucleotide metabolic process 4.05% (3/74) 2.8 0.009454 0.040631
GO:0006656 phosphatidylcholine biosynthetic process 1.35% (1/74) 6.72 0.009438 0.040899
GO:0006753 nucleoside phosphate metabolic process 4.05% (3/74) 2.78 0.009718 0.041422
GO:0006107 oxaloacetate metabolic process 1.35% (1/74) 6.67 0.009804 0.041449
GO:1901334 lactone metabolic process 1.35% (1/74) 6.6 0.010292 0.042815
GO:0009260 ribonucleotide biosynthetic process 2.7% (2/74) 3.71 0.010383 0.04285
GO:0019637 organophosphate metabolic process 5.41% (4/74) 2.25 0.01022 0.042859
GO:0072522 purine-containing compound biosynthetic process 2.7% (2/74) 3.7 0.010511 0.043037
GO:0090407 organophosphate biosynthetic process 4.05% (3/74) 2.73 0.010621 0.043146
GO:0008152 metabolic process 27.03% (20/74) 0.75 0.011179 0.044376
GO:0051640 organelle localization 2.7% (2/74) 3.66 0.011162 0.044647
GO:0046390 ribose phosphate biosynthetic process 2.7% (2/74) 3.66 0.011096 0.044727
GO:0046470 phosphatidylcholine metabolic process 1.35% (1/74) 6.37 0.011997 0.047261
GO:0008150 biological_process 40.54% (30/74) 0.54 0.012302 0.048097
GO:0042562 hormone binding 1.35% (1/74) 6.27 0.012849 0.048768
GO:0003674 molecular_function 48.65% (36/74) 0.46 0.01276 0.048786
GO:0005832 chaperonin-containing T-complex 1.35% (1/74) 6.26 0.01297 0.048873
GO:0043170 macromolecule metabolic process 20.27% (15/74) 0.9 0.012713 0.048968
GO:0000812 Swr1 complex 1.35% (1/74) 6.25 0.013092 0.048976
GO:0005789 endoplasmic reticulum membrane 2.7% (2/74) 3.56 0.012637 0.049037
GO:0032535 regulation of cellular component size 1.35% (1/74) 6.07 0.014792 0.049307
GO:0090066 regulation of anatomical structure size 1.35% (1/74) 6.07 0.014792 0.049307
GO:0043227 membrane-bounded organelle 14.86% (11/74) 1.07 0.014604 0.049312
GO:0007007 inner mitochondrial membrane organization 1.35% (1/74) 6.1 0.014428 0.049359
GO:0051302 regulation of cell division 1.35% (1/74) 6.1 0.014428 0.049359
GO:0031902 late endosome membrane 1.35% (1/74) 6.1 0.014428 0.049359
GO:0030688 preribosome, small subunit precursor 1.35% (1/74) 6.1 0.014428 0.049359
GO:0101031 protein folding chaperone complex 1.35% (1/74) 6.1 0.014428 0.049359
GO:0009059 macromolecule biosynthetic process 5.41% (4/74) 2.1 0.01453 0.049382
GO:0007006 mitochondrial membrane organization 1.35% (1/74) 6.04 0.015035 0.049797
GO:0090329 regulation of DNA-templated DNA replication 1.35% (1/74) 6.21 0.013456 0.049981
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (74) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms