Coexpression cluster: Cluster_3425 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 55.56% (45/81) 1.3 0.0 0.0
GO:0097159 organic cyclic compound binding 40.74% (33/81) 1.5 0.0 2e-06
GO:0003674 molecular_function 66.67% (54/81) 0.91 0.0 2e-06
GO:0019001 guanyl nucleotide binding 8.64% (7/81) 4.54 0.0 2e-06
GO:0017111 ribonucleoside triphosphate phosphatase activity 12.35% (10/81) 3.48 0.0 2e-06
GO:0032561 guanyl ribonucleotide binding 8.64% (7/81) 4.58 0.0 2e-06
GO:0005525 GTP binding 8.64% (7/81) 4.58 0.0 2e-06
GO:0016817 hydrolase activity, acting on acid anhydrides 12.35% (10/81) 3.35 0.0 2e-06
GO:0003746 translation elongation factor activity 4.94% (4/81) 6.85 0.0 2e-06
GO:0016462 pyrophosphatase activity 12.35% (10/81) 3.39 0.0 3e-06
GO:0003676 nucleic acid binding 25.93% (21/81) 1.98 0.0 3e-06
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 12.35% (10/81) 3.36 0.0 3e-06
GO:0035639 purine ribonucleoside triphosphate binding 22.22% (18/81) 2.07 0.0 7e-06
GO:0006414 translational elongation 4.94% (4/81) 6.29 0.0 8e-06
GO:0090079 translation regulator activity, nucleic acid binding 6.17% (5/81) 5.26 0.0 8e-06
GO:0008135 translation factor activity, RNA binding 6.17% (5/81) 5.26 0.0 8e-06
GO:0045182 translation regulator activity 6.17% (5/81) 5.08 0.0 1.3e-05
GO:0005575 cellular_component 44.44% (36/81) 1.15 1e-06 1.5e-05
GO:0005634 nucleus 17.28% (14/81) 2.22 2e-06 4.2e-05
GO:0032555 purine ribonucleotide binding 22.22% (18/81) 1.73 5e-06 0.000137
GO:0032553 ribonucleotide binding 22.22% (18/81) 1.72 6e-06 0.000146
GO:0097367 carbohydrate derivative binding 22.22% (18/81) 1.71 7e-06 0.000155
GO:0003729 mRNA binding 7.41% (6/81) 3.72 7e-06 0.000158
GO:0017076 purine nucleotide binding 22.22% (18/81) 1.68 9e-06 0.000193
GO:0003924 GTPase activity 6.17% (5/81) 4.15 1e-05 0.000208
GO:0000166 nucleotide binding 22.22% (18/81) 1.61 1.7e-05 0.000317
GO:1901265 nucleoside phosphate binding 22.22% (18/81) 1.61 1.7e-05 0.000317
GO:0043168 anion binding 22.22% (18/81) 1.59 2.1e-05 0.000387
GO:1901363 heterocyclic compound binding 22.22% (18/81) 1.57 2.4e-05 0.000424
GO:0036094 small molecule binding 22.22% (18/81) 1.56 2.7e-05 0.000448
GO:0110165 cellular anatomical entity 37.04% (30/81) 1.07 2.8e-05 0.000453
GO:0043167 ion binding 25.93% (21/81) 1.33 5.3e-05 0.000843
GO:0009059 macromolecule biosynthetic process 8.64% (7/81) 2.77 7.9e-05 0.001136
GO:0043226 organelle 22.22% (18/81) 1.45 7.7e-05 0.001141
GO:0043229 intracellular organelle 22.22% (18/81) 1.45 7.7e-05 0.001174
GO:0006355 regulation of DNA-templated transcription 11.11% (9/81) 2.25 0.000118 0.001616
GO:2001141 regulation of RNA biosynthetic process 11.11% (9/81) 2.25 0.000118 0.001616
GO:0043231 intracellular membrane-bounded organelle 19.75% (16/81) 1.49 0.000142 0.001887
GO:0043227 membrane-bounded organelle 19.75% (16/81) 1.48 0.000154 0.002004
GO:0044249 cellular biosynthetic process 12.35% (10/81) 2.03 0.000164 0.002072
GO:0051252 regulation of RNA metabolic process 11.11% (9/81) 2.18 0.000172 0.002117
GO:0010468 regulation of gene expression 12.35% (10/81) 2.0 0.000198 0.002385
GO:0010556 regulation of macromolecule biosynthetic process 12.35% (10/81) 1.99 0.000209 0.002459
GO:0019219 regulation of nucleobase-containing compound metabolic process 11.11% (9/81) 2.12 0.000229 0.002639
GO:0009889 regulation of biosynthetic process 12.35% (10/81) 1.96 0.000242 0.002662
GO:0031326 regulation of cellular biosynthetic process 12.35% (10/81) 1.97 0.000241 0.002706
GO:0005737 cytoplasm 12.35% (10/81) 1.94 0.00028 0.003013
GO:1901576 organic substance biosynthetic process 12.35% (10/81) 1.91 0.00032 0.003369
GO:0016887 ATP hydrolysis activity 6.17% (5/81) 3.02 0.000401 0.004138
GO:0008150 biological_process 45.68% (37/81) 0.72 0.000452 0.004237
GO:0060255 regulation of macromolecule metabolic process 12.35% (10/81) 1.86 0.000428 0.004247
GO:0016787 hydrolase activity 16.05% (13/81) 1.55 0.000452 0.004316
GO:0003723 RNA binding 9.88% (8/81) 2.16 0.000427 0.004319
GO:0031323 regulation of cellular metabolic process 12.35% (10/81) 1.85 0.000449 0.004366
GO:0009058 biosynthetic process 12.35% (10/81) 1.84 0.000479 0.004408
GO:0019222 regulation of metabolic process 12.35% (10/81) 1.81 0.000573 0.005088
GO:0051171 regulation of nitrogen compound metabolic process 11.11% (9/81) 1.94 0.000565 0.005108
GO:0080090 regulation of primary metabolic process 11.11% (9/81) 1.93 0.000605 0.005275
GO:0065007 biological regulation 16.05% (13/81) 1.5 0.000634 0.005437
GO:1990904 ribonucleoprotein complex 6.17% (5/81) 2.85 0.000696 0.005871
GO:0050794 regulation of cellular process 14.81% (12/81) 1.56 0.000738 0.00612
GO:0005515 protein binding 18.52% (15/81) 1.31 0.000924 0.007542
GO:0050789 regulation of biological process 14.81% (12/81) 1.48 0.001129 0.00907
GO:0032422 purine-rich negative regulatory element binding 1.23% (1/81) 9.54 0.001347 0.010487
GO:0003879 ATP phosphoribosyltransferase activity 1.23% (1/81) 9.54 0.001347 0.010487
GO:0044271 cellular nitrogen compound biosynthetic process 7.41% (6/81) 2.28 0.001515 0.011612
GO:0043603 amide metabolic process 4.94% (4/81) 2.97 0.00177 0.013169
GO:0010992 ubiquitin recycling 1.23% (1/81) 9.16 0.001751 0.013223
GO:0016763 pentosyltransferase activity 2.47% (2/81) 4.99 0.001867 0.01369
GO:0005524 ATP binding 13.58% (11/81) 1.46 0.00208 0.015038
GO:0006357 regulation of transcription by RNA polymerase II 4.94% (4/81) 2.9 0.002139 0.015247
GO:0006412 translation 3.7% (3/81) 3.5 0.002488 0.017484
GO:0003677 DNA binding 9.88% (8/81) 1.75 0.002696 0.018686
GO:0140657 ATP-dependent activity 7.41% (6/81) 2.09 0.00292 0.019966
GO:0003690 double-stranded DNA binding 4.94% (4/81) 2.75 0.003089 0.020569
GO:0044877 protein-containing complex binding 4.94% (4/81) 2.75 0.003065 0.020675
GO:0043043 peptide biosynthetic process 3.7% (3/81) 3.37 0.00317 0.02083
GO:1901566 organonitrogen compound biosynthetic process 6.17% (5/81) 2.31 0.003466 0.022487
GO:0043022 ribosome binding 2.47% (2/81) 4.5 0.003641 0.023321
GO:0032991 protein-containing complex 12.35% (10/81) 1.41 0.004202 0.026575
GO:0017040 N-acylsphingosine amidohydrolase activity 1.23% (1/81) 7.81 0.004439 0.027728
GO:0046514 ceramide catabolic process 1.23% (1/81) 7.57 0.005244 0.031967
GO:0006518 peptide metabolic process 3.7% (3/81) 3.12 0.005184 0.03199
GO:0004476 mannose-6-phosphate isomerase activity 1.23% (1/81) 7.46 0.005646 0.034009
GO:0140662 ATP-dependent protein folding chaperone 2.47% (2/81) 4.14 0.005904 0.035147
GO:0043021 ribonucleoprotein complex binding 2.47% (2/81) 4.12 0.006067 0.035289
GO:0030619 U1 snRNA binding 1.23% (1/81) 7.37 0.006048 0.035584
GO:0043604 amide biosynthetic process 3.7% (3/81) 2.98 0.006722 0.038651
GO:0030149 sphingolipid catabolic process 1.23% (1/81) 7.1 0.007253 0.039463
GO:0046466 membrane lipid catabolic process 1.23% (1/81) 7.1 0.007253 0.039463
GO:0043614 multi-eIF complex 1.23% (1/81) 7.13 0.007119 0.039586
GO:0071540 eukaryotic translation initiation factor 3 complex, eIF3e 1.23% (1/81) 7.13 0.007119 0.039586
GO:0005198 structural molecule activity 3.7% (3/81) 2.96 0.007038 0.040017
GO:0044183 protein folding chaperone 2.47% (2/81) 3.93 0.007796 0.041526
GO:0003824 catalytic activity 29.63% (24/81) 0.71 0.00774 0.041666
GO:0016471 vacuolar proton-transporting V-type ATPase complex 1.23% (1/81) 6.97 0.007922 0.041756
GO:0002188 translation reinitiation 1.23% (1/81) 6.95 0.008056 0.042023
GO:0042759 long-chain fatty acid biosynthetic process 1.23% (1/81) 6.93 0.008189 0.042285
GO:0033176 proton-transporting V-type ATPase complex 1.23% (1/81) 6.83 0.008724 0.04459
GO:0033179 proton-transporting V-type ATPase, V0 domain 1.23% (1/81) 6.75 0.009259 0.046849
GO:0006886 intracellular protein transport 3.7% (3/81) 2.79 0.009638 0.047812
GO:0009987 cellular process 29.63% (24/81) 0.69 0.009631 0.048252
GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m 1.23% (1/81) 6.63 0.01006 0.049419
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (81) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms