Coexpression cluster: Cluster_8545 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043487 regulation of RNA stability 50.0% (1/2) 9.83 0.001098 0.007095
GO:1903313 positive regulation of mRNA metabolic process 50.0% (1/2) 9.72 0.001184 0.007107
GO:0043138 3'-5' DNA helicase activity 50.0% (1/2) 9.84 0.001088 0.007616
GO:0036297 interstrand cross-link repair 50.0% (1/2) 9.95 0.001012 0.007724
GO:0061013 regulation of mRNA catabolic process 50.0% (1/2) 9.95 0.001012 0.007724
GO:0043488 regulation of mRNA stability 50.0% (1/2) 9.98 0.000988 0.009223
GO:0031331 positive regulation of cellular catabolic process 50.0% (1/2) 10.13 0.000892 0.009363
GO:0061014 positive regulation of mRNA catabolic process 50.0% (1/2) 10.13 0.000892 0.009363
GO:1903311 regulation of mRNA metabolic process 50.0% (1/2) 9.08 0.001846 0.010339
GO:0031329 regulation of cellular catabolic process 50.0% (1/2) 8.91 0.002072 0.01088
GO:0009896 positive regulation of catabolic process 50.0% (1/2) 8.75 0.002322 0.011472
GO:0061157 mRNA destabilization 50.0% (1/2) 10.17 0.000868 0.012158
GO:0050779 RNA destabilization 50.0% (1/2) 10.17 0.000868 0.012158
GO:0000400 four-way junction DNA binding 50.0% (1/2) 11.69 0.000303 0.012719
GO:0000725 recombinational repair 50.0% (1/2) 7.96 0.004023 0.016092
GO:0009894 regulation of catabolic process 50.0% (1/2) 8.02 0.00385 0.016171
GO:0003676 nucleic acid binding 100.0% (2/2) 3.93 0.004321 0.016499
GO:0003678 DNA helicase activity 50.0% (1/2) 8.13 0.003568 0.01665
GO:0000724 double-strand break repair via homologous recombination 50.0% (1/2) 8.03 0.003824 0.016905
GO:0000217 DNA secondary structure binding 50.0% (1/2) 10.2 0.000849 0.017819
GO:0009378 four-way junction helicase activity 50.0% (1/2) 10.57 0.000659 0.018448
GO:0045003 double-strand break repair via synthesis-dependent strand annealing 50.0% (1/2) 12.01 0.000243 0.020407
GO:0010608 post-transcriptional regulation of gene expression 50.0% (1/2) 7.42 0.005846 0.02046
GO:0006302 double-strand break repair 50.0% (1/2) 7.42 0.005812 0.021228
GO:0006310 DNA recombination 50.0% (1/2) 7.2 0.006795 0.02283
GO:0065008 regulation of biological quality 50.0% (1/2) 6.97 0.007948 0.023023
GO:0008094 ATP-dependent activity, acting on DNA 50.0% (1/2) 6.92 0.008234 0.023054
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.023647
GO:0004386 helicase activity 50.0% (1/2) 7.02 0.007687 0.023914
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.024105
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.025767
GO:0003729 mRNA binding 50.0% (1/2) 6.47 0.011227 0.026197
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.026557
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.027322
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.027779
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.028195
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.029207
GO:0006281 DNA repair 50.0% (1/2) 6.0 0.015545 0.033481
GO:0140097 catalytic activity, acting on DNA 50.0% (1/2) 6.0 0.015522 0.034311
GO:0006974 DNA damage response 50.0% (1/2) 5.87 0.01704 0.035784
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.042227
GO:0033554 cellular response to stress 50.0% (1/2) 5.37 0.024053 0.048106
GO:0051716 cellular response to stimulus 50.0% (1/2) 5.33 0.02476 0.048367
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms