Coexpression cluster: Cluster_739 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046863 ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity 9.21% (7/76) 10.2 0.0 0.0
GO:0009579 thylakoid 9.21% (7/76) 7.2 0.0 0.0
GO:0009570 chloroplast stroma 9.21% (7/76) 5.62 0.0 0.0
GO:0009532 plastid stroma 9.21% (7/76) 5.62 0.0 0.0
GO:0008047 enzyme activator activity 9.21% (7/76) 5.21 0.0 0.0
GO:0140677 molecular function activator activity 9.21% (7/76) 5.12 0.0 0.0
GO:0004176 ATP-dependent peptidase activity 5.26% (4/76) 6.65 0.0 2e-06
GO:0030234 enzyme regulator activity 9.21% (7/76) 3.96 0.0 9e-06
GO:0098772 molecular function regulator activity 9.21% (7/76) 3.87 1e-06 1.3e-05
GO:0016887 ATP hydrolysis activity 9.21% (7/76) 3.6 2e-06 3.8e-05
GO:0009521 photosystem 3.95% (3/76) 6.09 1.3e-05 0.000228
GO:0017111 ribonucleoside triphosphate phosphatase activity 9.21% (7/76) 3.06 2.2e-05 0.000355
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 5.26% (4/76) 4.59 2.6e-05 0.000376
GO:0015979 photosynthesis 3.95% (3/76) 5.69 3e-05 0.000405
GO:0016462 pyrophosphatase activity 9.21% (7/76) 2.96 3.4e-05 0.000408
GO:0000987 cis-regulatory region sequence-specific DNA binding 5.26% (4/76) 4.5 3.3e-05 0.000416
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 9.21% (7/76) 2.94 3.8e-05 0.000427
GO:0016817 hydrolase activity, acting on acid anhydrides 9.21% (7/76) 2.93 4e-05 0.000428
GO:0043228 non-membrane-bounded organelle 9.21% (7/76) 2.88 4.9e-05 0.000466
GO:0043232 intracellular non-membrane-bounded organelle 9.21% (7/76) 2.88 4.9e-05 0.00049
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 5.26% (4/76) 4.27 6e-05 0.000548
GO:0009654 photosystem II oxygen evolving complex 2.63% (2/76) 6.54 0.000224 0.001942
GO:0016757 glycosyltransferase activity 7.89% (6/76) 2.73 0.000306 0.00254
GO:0009523 photosystem II 2.63% (2/76) 6.26 0.000331 0.002634
GO:0015250 water channel activity 2.63% (2/76) 6.12 0.000397 0.00292
GO:0005372 water transmembrane transporter activity 2.63% (2/76) 6.12 0.000397 0.00292
GO:0000976 transcription cis-regulatory region binding 5.26% (4/76) 3.53 0.000428 0.002922
GO:0001067 transcription regulatory region nucleic acid binding 5.26% (4/76) 3.53 0.000428 0.002922
GO:1990837 sequence-specific double-stranded DNA binding 5.26% (4/76) 3.42 0.000567 0.003734
GO:0004601 peroxidase activity 3.95% (3/76) 4.17 0.00066 0.004064
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 3.95% (3/76) 4.17 0.00066 0.004064
GO:0019898 extrinsic component of membrane 2.63% (2/76) 5.68 0.000732 0.004372
GO:0016209 antioxidant activity 3.95% (3/76) 3.96 0.000995 0.005589
GO:0006979 response to oxidative stress 3.95% (3/76) 3.97 0.000978 0.005662
GO:0034605 cellular response to heat 2.63% (2/76) 5.29 0.001237 0.006752
GO:0061635 regulation of protein complex stability 1.32% (1/76) 9.49 0.00139 0.007376
GO:0090156 intracellular sphingolipid homeostasis 1.32% (1/76) 9.25 0.001643 0.008258
GO:0035339 SPOTS complex 1.32% (1/76) 9.25 0.001643 0.008258
GO:0006357 regulation of transcription by RNA polymerase II 5.26% (4/76) 2.99 0.001693 0.008293
GO:0009408 response to heat 2.63% (2/76) 4.88 0.002174 0.010382
GO:0003690 double-stranded DNA binding 5.26% (4/76) 2.84 0.002452 0.011423
GO:0009266 response to temperature stimulus 2.63% (2/76) 4.59 0.003224 0.014661
GO:0003700 DNA-binding transcription factor activity 6.58% (5/76) 2.29 0.003659 0.016254
GO:0002178 palmitoyltransferase complex 1.32% (1/76) 7.95 0.004039 0.016772
GO:0017059 serine C-palmitoyltransferase complex 1.32% (1/76) 7.95 0.004039 0.016772
GO:0031211 endoplasmic reticulum palmitoyltransferase complex 1.32% (1/76) 7.95 0.004039 0.016772
GO:1990204 oxidoreductase complex 2.63% (2/76) 4.3 0.004783 0.019438
GO:0055035 plastid thylakoid membrane 2.63% (2/76) 4.09 0.00632 0.024637
GO:0009535 chloroplast thylakoid membrane 2.63% (2/76) 4.09 0.00632 0.024637
GO:0140110 transcription regulator activity 6.58% (5/76) 2.04 0.007575 0.026794
GO:0043565 sequence-specific DNA binding 5.26% (4/76) 2.38 0.007484 0.026972
GO:0009538 photosystem I reaction center 1.32% (1/76) 7.07 0.007435 0.027309
GO:0042651 thylakoid membrane 2.63% (2/76) 3.97 0.007421 0.027792
GO:0034357 photosynthetic membrane 2.63% (2/76) 3.97 0.007421 0.027792
GO:0008233 peptidase activity 5.26% (4/76) 2.22 0.010858 0.037705
GO:0045551 cinnamyl-alcohol dehydrogenase activity 1.32% (1/76) 6.17 0.013817 0.047128
GO:0042170 plastid membrane 2.63% (2/76) 3.48 0.014203 0.047593
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (76) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms