Coexpression cluster: Cluster_12049 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990837 sequence-specific double-stranded DNA binding 100.0% (2/2) 7.67 2.4e-05 0.000291
GO:0000976 transcription cis-regulatory region binding 100.0% (2/2) 7.77 2.1e-05 0.000375
GO:0001067 transcription regulatory region nucleic acid binding 100.0% (2/2) 7.77 2.1e-05 0.000375
GO:0003690 double-stranded DNA binding 100.0% (2/2) 7.09 5.4e-05 0.000486
GO:0043565 sequence-specific DNA binding 100.0% (2/2) 6.63 0.000102 0.000734
GO:0003700 DNA-binding transcription factor activity 100.0% (2/2) 6.22 0.00018 0.001082
GO:0140110 transcription regulator activity 100.0% (2/2) 5.97 0.000256 0.001317
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 4.98 0.001001 0.002002
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 4.87 0.001171 0.002108
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 4.98 0.000999 0.002116
GO:0019219 regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 5.29 0.000652 0.002135
GO:0019222 regulation of metabolic process 100.0% (2/2) 4.82 0.001247 0.002139
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 5.01 0.000964 0.00217
GO:0051252 regulation of RNA metabolic process 100.0% (2/2) 5.35 0.000603 0.00217
GO:0006355 regulation of DNA-templated transcription 100.0% (2/2) 5.42 0.000545 0.002182
GO:2001141 regulation of RNA biosynthetic process 100.0% (2/2) 5.42 0.000545 0.002182
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 4.88 0.001157 0.002192
GO:0003677 DNA binding 100.0% (2/2) 5.09 0.000868 0.002231
GO:0005634 nucleus 100.0% (2/2) 4.76 0.001367 0.002237
GO:0010468 regulation of gene expression 100.0% (2/2) 5.02 0.000951 0.002284
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 5.1 0.000853 0.002362
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 5.11 0.000837 0.002511
GO:0050794 regulation of cellular process 100.0% (2/2) 4.31 0.002541 0.003977
GO:0050789 regulation of biological process 100.0% (2/2) 4.24 0.002804 0.004206
GO:0065007 biological regulation 100.0% (2/2) 4.14 0.003232 0.004654
GO:0003676 nucleic acid binding 100.0% (2/2) 3.93 0.004321 0.005983
GO:0043227 membrane-bounded organelle 100.0% (2/2) 3.82 0.004993 0.00642
GO:0043231 intracellular membrane-bounded organelle 100.0% (2/2) 3.83 0.004919 0.006559
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.007981
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.008255
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.023935
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.035136
GO:0005575 cellular_component 100.0% (2/2) 2.32 0.039968 0.043602
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms