Coexpression cluster: Cluster_462 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016817 hydrolase activity, acting on acid anhydrides 10.43% (12/115) 3.11 0.0 2e-06
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 10.43% (12/115) 3.12 0.0 3e-06
GO:0017111 ribonucleoside triphosphate phosphatase activity 10.43% (12/115) 3.24 0.0 3e-06
GO:0016462 pyrophosphatase activity 10.43% (12/115) 3.14 0.0 4e-06
GO:0016887 ATP hydrolysis activity 7.83% (9/115) 3.36 0.0 2.8e-05
GO:0048471 perinuclear region of cytoplasm 2.61% (3/115) 6.86 3e-06 0.000222
GO:0050821 protein stabilization 2.61% (3/115) 6.12 1.2e-05 0.000877
GO:0031647 regulation of protein stability 2.61% (3/115) 5.98 1.7e-05 0.001038
GO:0003723 RNA binding 9.57% (11/115) 2.12 5.1e-05 0.002824
GO:0009570 chloroplast stroma 3.48% (4/115) 4.22 7.1e-05 0.002944
GO:0009532 plastid stroma 3.48% (4/115) 4.22 7.1e-05 0.002944
GO:0034605 cellular response to heat 2.61% (3/115) 5.28 7e-05 0.00346
GO:0005488 binding 38.26% (44/115) 0.76 0.000108 0.004125
GO:0016070 RNA metabolic process 9.57% (11/115) 1.98 0.00012 0.004249
GO:0009408 response to heat 2.61% (3/115) 4.87 0.000163 0.005367
GO:0016787 hydrolase activity 14.78% (17/115) 1.43 0.000183 0.005674
GO:0003674 molecular_function 51.3% (59/115) 0.54 0.000329 0.008152
GO:0009266 response to temperature stimulus 2.61% (3/115) 4.58 0.000293 0.008537
GO:0018195 peptidyl-arginine modification 1.74% (2/115) 6.26 0.000328 0.008538
GO:0018216 peptidyl-arginine methylation 1.74% (2/115) 6.27 0.000323 0.008881
GO:1901360 organic cyclic compound metabolic process 13.91% (16/115) 1.39 0.000388 0.009152
GO:0043414 macromolecule methylation 3.48% (4/115) 3.54 0.00042 0.009443
GO:0008170 N-methyltransferase activity 2.61% (3/115) 4.27 0.000538 0.010249
GO:0016273 arginine N-methyltransferase activity 1.74% (2/115) 5.93 0.000523 0.010348
GO:0016274 protein-arginine N-methyltransferase activity 1.74% (2/115) 5.93 0.000523 0.010348
GO:0008168 methyltransferase activity 4.35% (5/115) 2.9 0.000609 0.010766
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.48% (4/115) 3.33 0.000732 0.010977
GO:0140662 ATP-dependent protein folding chaperone 2.61% (3/115) 4.22 0.000602 0.011039
GO:0006396 RNA processing 6.09% (7/115) 2.34 0.000518 0.011146
GO:0016741 transferase activity, transferring one-carbon groups 4.35% (5/115) 2.84 0.00073 0.011288
GO:0051082 unfolded protein binding 2.61% (3/115) 4.13 0.000723 0.011538
GO:0097159 organic cyclic compound binding 26.09% (30/115) 0.86 0.00069 0.01177
GO:0090304 nucleic acid metabolic process 11.3% (13/115) 1.5 0.000716 0.011822
GO:0006725 cellular aromatic compound metabolic process 13.04% (15/115) 1.34 0.000859 0.012502
GO:0044183 protein folding chaperone 2.61% (3/115) 4.01 0.000913 0.01291
GO:0006139 nucleobase-containing compound metabolic process 12.17% (14/115) 1.37 0.001038 0.014268
GO:0035246 peptidyl-arginine N-methylation 0.87% (1/115) 9.77 0.001148 0.014567
GO:0032259 methylation 3.48% (4/115) 3.16 0.001135 0.01479
GO:0034660 ncRNA metabolic process 5.22% (6/115) 2.38 0.001134 0.015174
GO:0005829 cytosol 6.09% (7/115) 2.1 0.001334 0.016513
GO:0034470 ncRNA processing 4.35% (5/115) 2.6 0.001535 0.018535
GO:0002938 tRNA guanine ribose methylation 0.87% (1/115) 9.18 0.001721 0.019362
GO:0009020 obsolete tRNA (guanosine-2'-O-)-methyltransferase activity 0.87% (1/115) 9.18 0.001721 0.019362
GO:0016570 histone modification 2.61% (3/115) 3.7 0.001676 0.019754
GO:0003824 catalytic activity 29.57% (34/115) 0.71 0.001839 0.02023
GO:0046483 heterocycle metabolic process 12.17% (14/115) 1.27 0.001975 0.020799
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.74% (2/115) 4.96 0.001948 0.020964
GO:0000959 mitochondrial RNA metabolic process 1.74% (2/115) 4.9 0.002123 0.021892
GO:0140640 catalytic activity, acting on a nucleic acid 6.96% (8/115) 1.79 0.002392 0.023678
GO:0140098 catalytic activity, acting on RNA 5.22% (6/115) 2.16 0.002376 0.024006
GO:0030488 tRNA methylation 1.74% (2/115) 4.54 0.003438 0.029341
GO:0030686 90S preribosome 1.74% (2/115) 4.6 0.003203 0.02936
GO:0034969 histone arginine methylation 0.87% (1/115) 8.1 0.00363 0.029455
GO:0008469 histone arginine N-methyltransferase activity 0.87% (1/115) 8.1 0.00363 0.029455
GO:0035639 purine ribonucleoside triphosphate binding 12.17% (14/115) 1.2 0.003099 0.029505
GO:1990904 ribonucleoprotein complex 4.35% (5/115) 2.34 0.003284 0.029552
GO:0030490 maturation of SSU-rRNA 1.74% (2/115) 4.55 0.003408 0.029597
GO:0000388 spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) 0.87% (1/115) 8.35 0.003058 0.029676
GO:0030515 snoRNA binding 1.74% (2/115) 4.6 0.003188 0.029779
GO:0034641 cellular nitrogen compound metabolic process 12.17% (14/115) 1.19 0.003393 0.029994
GO:0003676 nucleic acid binding 13.91% (16/115) 1.08 0.003582 0.030055
GO:0002128 tRNA nucleoside ribose methylation 0.87% (1/115) 7.65 0.004964 0.039631
GO:0006457 protein folding 2.61% (3/115) 3.13 0.005053 0.039699
GO:0010484 histone H3 acetyltransferase activity 0.87% (1/115) 7.6 0.005154 0.039865
GO:0009628 response to abiotic stimulus 2.61% (3/115) 3.09 0.005542 0.042203
GO:1905958 negative regulation of cellular response to alcohol 0.87% (1/115) 7.35 0.006106 0.042569
GO:1901420 negative regulation of response to alcohol 0.87% (1/115) 7.35 0.006106 0.042569
GO:0009788 negative regulation of abscisic acid-activated signaling pathway 0.87% (1/115) 7.35 0.006106 0.042569
GO:0045893 positive regulation of DNA-templated transcription 2.61% (3/115) 3.06 0.005852 0.043234
GO:1902680 positive regulation of RNA biosynthetic process 2.61% (3/115) 3.06 0.005852 0.043234
GO:0017076 purine nucleotide binding 13.91% (16/115) 1.0 0.006059 0.044105
GO:0003924 GTPase activity 2.61% (3/115) 2.91 0.007707 0.045414
GO:0006659 phosphatidylserine biosynthetic process 0.87% (1/115) 7.07 0.007437 0.045446
GO:0048564 photosystem I assembly 0.87% (1/115) 7.07 0.007437 0.045446
GO:0106245 L-serine-phosphatidylethanolamine phosphatidyltransferase activity 0.87% (1/115) 7.07 0.007437 0.045446
GO:0070150 mitochondrial glycyl-tRNA aminoacylation 0.87% (1/115) 7.03 0.007627 0.045484
GO:0006658 phosphatidylserine metabolic process 0.87% (1/115) 7.03 0.007627 0.045484
GO:0003856 3-dehydroquinate synthase activity 0.87% (1/115) 7.1 0.007247 0.045988
GO:0009787 regulation of abscisic acid-activated signaling pathway 0.87% (1/115) 7.1 0.007247 0.045988
GO:1901419 regulation of response to alcohol 0.87% (1/115) 7.1 0.007247 0.045988
GO:1905957 regulation of cellular response to alcohol 0.87% (1/115) 7.1 0.007247 0.045988
GO:0043966 histone H3 acetylation 0.87% (1/115) 7.18 0.006866 0.047207
GO:0043022 ribosome binding 1.74% (2/115) 3.99 0.007188 0.048084
GO:0032561 guanyl ribonucleotide binding 2.61% (3/115) 2.85 0.008631 0.048551
GO:0005525 GTP binding 2.61% (3/115) 2.85 0.008631 0.048551
GO:0032991 protein-containing complex 10.43% (12/115) 1.17 0.007174 0.048648
GO:0140101 catalytic activity, acting on a tRNA 2.61% (3/115) 2.84 0.00875 0.048664
GO:0006479 protein methylation 1.74% (2/115) 3.86 0.008546 0.049192
GO:0008213 protein alkylation 1.74% (2/115) 3.86 0.008546 0.049192
GO:0070127 tRNA aminoacylation for mitochondrial protein translation 0.87% (1/115) 6.71 0.009524 0.049626
GO:0034455 t-UTP complex 0.87% (1/115) 6.71 0.009524 0.049626
GO:1901265 nucleoside phosphate binding 13.91% (16/115) 0.94 0.009187 0.049973
GO:0000166 nucleotide binding 13.91% (16/115) 0.94 0.009187 0.049973
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (115) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms