Coexpression cluster: Cluster_3702 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016072 rRNA metabolic process 6.78% (4/59) 4.0 0.00012 0.01115
GO:0009987 cellular process 38.98% (23/59) 1.08 0.000178 0.013761
GO:0016074 sno(s)RNA metabolic process 3.39% (2/59) 6.99 0.000119 0.013813
GO:0005575 cellular_component 40.68% (24/59) 1.02 0.000221 0.014629
GO:0030519 snoRNP binding 1.69% (1/59) 9.99 0.000981 0.017476
GO:0062064 box C/D snoRNP complex binding 1.69% (1/59) 9.99 0.000981 0.017476
GO:0008150 biological_process 47.46% (28/59) 0.77 0.001032 0.017703
GO:0016043 cellular component organization 11.86% (7/59) 2.17 0.000926 0.017865
GO:0043144 sno(s)RNA processing 3.39% (2/59) 7.01 0.000116 0.017961
GO:0030490 maturation of SSU-rRNA 3.39% (2/59) 5.51 0.000914 0.018407
GO:0034470 ncRNA processing 6.78% (4/59) 3.24 0.000889 0.01871
GO:0005730 nucleolus 5.08% (3/59) 3.87 0.001186 0.018931
GO:0071840 cellular component organization or biogenesis 13.56% (8/59) 2.2 0.000332 0.019205
GO:0009039 urease activity 1.69% (1/59) 9.73 0.001178 0.019472
GO:0036009 protein-glutamine N-methyltransferase activity 1.69% (1/59) 10.14 0.000883 0.019474
GO:0000494 box C/D RNA 3'-end processing 1.69% (1/59) 10.14 0.000883 0.019474
GO:0071566 UFM1 activating enzyme activity 1.69% (1/59) 10.14 0.000883 0.019474
GO:0140940 histone H2A methyltransferase activity 1.69% (1/59) 10.14 0.000883 0.019474
GO:0033967 box C/D RNA metabolic process 1.69% (1/59) 10.14 0.000883 0.019474
GO:0034963 box C/D RNA processing 1.69% (1/59) 10.14 0.000883 0.019474
GO:1990259 histone H2AQ104 methyltransferase activity 1.69% (1/59) 10.14 0.000883 0.019474
GO:0019627 urea metabolic process 1.69% (1/59) 9.61 0.001276 0.019687
GO:0030864 cortical actin cytoskeleton 1.69% (1/59) 9.23 0.001668 0.02145
GO:0030863 cortical cytoskeleton 1.69% (1/59) 9.23 0.001668 0.02145
GO:0045184 establishment of protein localization 6.78% (4/59) 3.02 0.001545 0.021673
GO:0032991 protein-containing complex 15.25% (9/59) 1.72 0.0015 0.021707
GO:0006839 mitochondrial transport 3.39% (2/59) 4.95 0.001971 0.021729
GO:0070918 regulatory ncRNA processing 3.39% (2/59) 5.02 0.001793 0.021851
GO:0019866 organelle inner membrane 3.39% (2/59) 5.04 0.001749 0.021884
GO:0110165 cellular anatomical entity 33.9% (20/59) 0.94 0.002033 0.021886
GO:0140674 ATP-dependent histone chaperone activity 1.69% (1/59) 8.99 0.001962 0.022154
GO:0140713 histone chaperone activity 1.69% (1/59) 8.99 0.001962 0.022154
GO:0140849 ATP-dependent H2AZ histone chaperone activity 1.69% (1/59) 8.99 0.001962 0.022154
GO:0071702 organic substance transport 8.47% (5/59) 2.59 0.001487 0.022216
GO:0006364 rRNA processing 5.08% (3/59) 3.7 0.001645 0.022401
GO:0033036 macromolecule localization 6.78% (4/59) 2.86 0.002323 0.023386
GO:0070727 cellular macromolecule localization 6.78% (4/59) 2.86 0.002307 0.023738
GO:0008104 protein localization 6.78% (4/59) 2.86 0.002288 0.024076
GO:0031126 sno(s)RNA 3'-end processing 3.39% (2/59) 7.05 0.000111 0.025597
GO:0043628 regulatory ncRNA 3'-end processing 3.39% (2/59) 7.05 0.000111 0.025597
GO:0030943 mitochondrion targeting sequence binding 1.69% (1/59) 10.31 0.000785 0.025967
GO:0043419 urea catabolic process 1.69% (1/59) 10.31 0.000785 0.025967
GO:0035550 urease complex 1.69% (1/59) 10.73 0.000589 0.027268
GO:0071705 nitrogen compound transport 8.47% (5/59) 2.91 0.000543 0.027955
GO:0034660 ncRNA metabolic process 6.78% (4/59) 2.76 0.002981 0.028168
GO:0016070 RNA metabolic process 10.17% (6/59) 2.07 0.003061 0.028342
GO:0016514 SWI/SNF complex 1.69% (1/59) 8.41 0.002941 0.028371
GO:0042721 TIM22 mitochondrial import inner membrane insertion complex 1.69% (1/59) 8.41 0.002941 0.028371
GO:0006396 RNA processing 8.47% (5/59) 2.81 0.000739 0.028494
GO:0140647 P450-containing electron transport chain 1.69% (1/59) 8.27 0.003235 0.029368
GO:0015031 protein transport 6.78% (4/59) 3.33 0.000706 0.029727
GO:0071941 nitrogen cycle metabolic process 1.69% (1/59) 8.1 0.003626 0.032289
GO:1990544 mitochondrial ATP transmembrane transport 1.69% (1/59) 7.92 0.004115 0.032296
GO:0140021 mitochondrial ADP transmembrane transport 1.69% (1/59) 7.92 0.004115 0.032296
GO:0031123 RNA 3'-end processing 3.39% (2/59) 4.42 0.004024 0.032685
GO:0018205 peptidyl-lysine modification 3.39% (2/59) 4.46 0.003845 0.032966
GO:0030570 pectate lyase activity 1.69% (1/59) 7.96 0.004018 0.033217
GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides 1.69% (1/59) 7.96 0.004018 0.033217
GO:0043605 amide catabolic process 1.69% (1/59) 7.85 0.004311 0.033267
GO:0043967 histone H4 acetylation 1.69% (1/59) 8.03 0.003822 0.033389
GO:0045039 protein insertion into mitochondrial inner membrane 1.69% (1/59) 7.79 0.004507 0.034205
GO:0016151 nickel cation binding 1.69% (1/59) 7.76 0.004604 0.034384
GO:0071569 protein ufmylation 1.69% (1/59) 7.56 0.005288 0.038864
GO:0032324 molybdopterin cofactor biosynthetic process 1.69% (1/59) 7.21 0.006752 0.041684
GO:0051189 prosthetic group metabolic process 1.69% (1/59) 7.21 0.006752 0.041684
GO:0000492 box C/D snoRNP assembly 1.69% (1/59) 7.21 0.006752 0.041684
GO:0043545 molybdopterin cofactor metabolic process 1.69% (1/59) 7.21 0.006752 0.041684
GO:0005471 ATP:ADP antiporter activity 1.69% (1/59) 7.25 0.006557 0.04276
GO:0015867 ATP transport 1.69% (1/59) 7.25 0.006557 0.04276
GO:0015866 ADP transport 1.69% (1/59) 7.25 0.006557 0.04276
GO:0043228 non-membrane-bounded organelle 6.78% (4/59) 2.44 0.006424 0.043739
GO:0019720 Mo-molybdopterin cofactor metabolic process 1.69% (1/59) 7.34 0.006167 0.043928
GO:0006777 Mo-molybdopterin cofactor biosynthetic process 1.69% (1/59) 7.34 0.006167 0.043928
GO:0000491 small nucleolar ribonucleoprotein complex assembly 1.69% (1/59) 7.1 0.00724 0.044106
GO:0004602 glutathione peroxidase activity 1.69% (1/59) 7.09 0.007337 0.044119
GO:0043232 intracellular non-membrane-bounded organelle 6.78% (4/59) 2.44 0.006421 0.044372
GO:0051641 cellular localization 6.78% (4/59) 2.36 0.007859 0.044377
GO:0043226 organelle 18.64% (11/59) 1.19 0.007576 0.044403
GO:0030042 actin filament depolymerization 1.69% (1/59) 7.29 0.006362 0.044631
GO:0005788 endoplasmic reticulum lumen 1.69% (1/59) 6.99 0.007825 0.044726
GO:0015217 ADP transmembrane transporter activity 1.69% (1/59) 6.99 0.007825 0.044726
GO:0043229 intracellular organelle 18.64% (11/59) 1.19 0.007571 0.044939
GO:0043486 obsolete histone exchange 1.69% (1/59) 6.84 0.008701 0.047395
GO:0071028 nuclear mRNA surveillance 1.69% (1/59) 6.84 0.008701 0.047395
GO:0017038 protein import 1.69% (1/59) 6.84 0.008701 0.047395
GO:0044877 protein-containing complex binding 5.08% (3/59) 2.79 0.009429 0.047453
GO:0000815 ESCRT III complex 1.69% (1/59) 6.7 0.009577 0.047678
GO:0030684 preribosome 3.39% (2/59) 3.79 0.009389 0.047772
GO:1901679 nucleotide transmembrane transport 1.69% (1/59) 6.64 0.009966 0.048064
GO:0072530 purine-containing compound transmembrane transport 1.69% (1/59) 6.66 0.009869 0.048096
GO:0006996 organelle organization 6.78% (4/59) 2.26 0.009782 0.048182
GO:0015868 purine ribonucleotide transport 1.69% (1/59) 6.73 0.009382 0.048267
GO:0090304 nucleic acid metabolic process 11.86% (7/59) 1.57 0.008998 0.048445
GO:0046483 heterocycle metabolic process 13.56% (8/59) 1.43 0.009208 0.048448
GO:0006807 nitrogen compound metabolic process 23.73% (14/59) 0.98 0.009315 0.048459
GO:0042274 ribosomal small subunit biogenesis 1.69% (1/59) 6.61 0.01016 0.048497
GO:0045037 protein import into chloroplast stroma 1.69% (1/59) 6.76 0.009188 0.048896
GO:0030688 preribosome, small subunit precursor 1.69% (1/59) 6.43 0.01152 0.049387
GO:0007007 inner mitochondrial membrane organization 1.69% (1/59) 6.43 0.01152 0.049387
GO:0015035 protein-disulfide reductase activity 1.69% (1/59) 6.43 0.01152 0.049387
GO:0140597 protein carrier chaperone 1.69% (1/59) 6.46 0.011326 0.049942
GO:0005347 ATP transmembrane transporter activity 1.69% (1/59) 6.46 0.011326 0.049942
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (59) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms