Coexpression cluster: Cluster_3975 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0065007 biological regulation 17.89% (17/95) 1.65 2.4e-05 0.006355
GO:0015031 protein transport 6.32% (6/95) 3.22 4.9e-05 0.006496
GO:0050789 regulation of biological process 16.84% (16/95) 1.67 3.8e-05 0.006717
GO:0006886 intracellular protein transport 6.32% (6/95) 3.56 1.4e-05 0.007192
GO:0071705 nitrogen compound transport 7.37% (7/95) 2.71 0.000106 0.007936
GO:0050794 regulation of cellular process 15.79% (15/95) 1.65 8.2e-05 0.008593
GO:0019222 regulation of metabolic process 12.63% (12/95) 1.84 0.000135 0.008845
GO:0045184 establishment of protein localization 6.32% (6/95) 2.92 0.000157 0.009187
GO:0005575 cellular_component 36.84% (35/95) 0.88 0.000105 0.009219
GO:0043227 membrane-bounded organelle 17.89% (17/95) 1.34 0.000339 0.009883
GO:0033036 macromolecule localization 6.32% (6/95) 2.75 0.000288 0.010064
GO:0043231 intracellular membrane-bounded organelle 17.89% (17/95) 1.35 0.000311 0.010192
GO:0051649 establishment of localization in cell 6.32% (6/95) 2.72 0.00033 0.010204
GO:0043226 organelle 20.0% (19/95) 1.29 0.000216 0.010331
GO:0071702 organic substance transport 7.37% (7/95) 2.38 0.000416 0.01041
GO:0070727 cellular macromolecule localization 6.32% (6/95) 2.76 0.000285 0.010672
GO:0031323 regulation of cellular metabolic process 11.58% (11/95) 1.76 0.000416 0.010915
GO:0060255 regulation of macromolecule metabolic process 11.58% (11/95) 1.77 0.000395 0.010924
GO:0043229 intracellular organelle 20.0% (19/95) 1.29 0.000216 0.01135
GO:0008104 protein localization 6.32% (6/95) 2.76 0.000281 0.011353
GO:0046907 intracellular transport 6.32% (6/95) 2.76 0.000276 0.012079
GO:0030117 membrane coat 3.16% (3/95) 4.28 0.00053 0.012658
GO:0072583 clathrin-dependent endocytosis 2.11% (2/95) 5.6 0.000811 0.018507
GO:0065002 intracellular protein transmembrane transport 2.11% (2/95) 5.47 0.000979 0.02141
GO:0019144 ADP-sugar diphosphatase activity 1.05% (1/95) 9.31 0.00158 0.025133
GO:0080042 ADP-glucose pyrophosphohydrolase activity 1.05% (1/95) 9.31 0.00158 0.025133
GO:0080041 ADP-ribose pyrophosphohydrolase activity 1.05% (1/95) 9.31 0.00158 0.025133
GO:0030276 clathrin binding 2.11% (2/95) 5.16 0.001482 0.025932
GO:0051641 cellular localization 6.32% (6/95) 2.25 0.001719 0.026542
GO:0032205 negative regulation of telomere maintenance 1.05% (1/95) 9.46 0.001422 0.026661
GO:1904357 negative regulation of telomere maintenance via telomere lengthening 1.05% (1/95) 9.46 0.001422 0.026661
GO:0032211 negative regulation of telomere maintenance via telomerase 1.05% (1/95) 9.46 0.001422 0.026661
GO:0032991 protein-containing complex 12.63% (12/95) 1.45 0.00148 0.02679
GO:0051336 regulation of hydrolase activity 2.11% (2/95) 5.0 0.001839 0.027582
GO:0009882 blue light photoreceptor activity 1.05% (1/95) 9.04 0.001895 0.027642
GO:0006898 receptor-mediated endocytosis 2.11% (2/95) 5.21 0.001392 0.029239
GO:0030234 enzyme regulator activity 4.21% (4/95) 2.83 0.002544 0.03515
GO:0009889 regulation of biosynthetic process 9.47% (9/95) 1.58 0.003221 0.035234
GO:0031326 regulation of cellular biosynthetic process 9.47% (9/95) 1.58 0.003206 0.03581
GO:0009881 photoreceptor activity 1.05% (1/95) 8.63 0.002526 0.035848
GO:0032984 protein-containing complex disassembly 2.11% (2/95) 4.56 0.003356 0.035958
GO:0098772 molecular function regulator activity 4.21% (4/95) 2.74 0.003196 0.036472
GO:0016592 mediator complex 2.11% (2/95) 4.6 0.003176 0.037049
GO:0010556 regulation of macromolecule biosynthetic process 9.47% (9/95) 1.61 0.002853 0.03744
GO:0009785 blue light signaling pathway 1.05% (1/95) 8.31 0.003157 0.03767
GO:0030522 intracellular receptor signaling pathway 1.05% (1/95) 8.31 0.003157 0.03767
GO:0071483 cellular response to blue light 1.05% (1/95) 8.31 0.003157 0.03767
GO:0006810 transport 10.53% (10/95) 1.5 0.00282 0.037959
GO:0051234 establishment of localization 10.53% (10/95) 1.44 0.003869 0.03833
GO:0097352 autophagosome maturation 1.05% (1/95) 7.98 0.003945 0.038352
GO:0071806 protein transmembrane transport 2.11% (2/95) 4.46 0.00386 0.038975
GO:0051230 spindle disassembly 1.05% (1/95) 8.04 0.003787 0.038987
GO:0051228 mitotic spindle disassembly 1.05% (1/95) 8.04 0.003787 0.038987
GO:0140513 nuclear protein-containing complex 6.32% (6/95) 2.08 0.003085 0.0395
GO:0099080 supramolecular complex 3.16% (3/95) 3.22 0.004251 0.040579
GO:0017009 protein-phycocyanobilin linkage 1.05% (1/95) 7.72 0.004732 0.042832
GO:0017007 protein-bilin linkage 1.05% (1/95) 7.72 0.004732 0.042832
GO:0098796 membrane protein complex 4.21% (4/95) 2.59 0.004582 0.042953
GO:0030130 clathrin coat of trans-Golgi network vesicle 1.05% (1/95) 7.5 0.005518 0.043241
GO:0030132 clathrin coat of coated pit 1.05% (1/95) 7.5 0.005518 0.043241
GO:0004430 1-phosphatidylinositol 4-kinase activity 1.05% (1/95) 7.5 0.005518 0.043241
GO:0030970 retrograde protein transport, ER to cytosol 1.05% (1/95) 7.58 0.005204 0.044065
GO:1903513 endoplasmic reticulum to cytosol transport 1.05% (1/95) 7.58 0.005204 0.044065
GO:0051179 localization 10.53% (10/95) 1.39 0.004994 0.044435
GO:0032527 protein exit from endoplasmic reticulum 1.05% (1/95) 7.54 0.005361 0.044676
GO:0016817 hydrolase activity, acting on acid anhydrides 5.26% (5/95) 2.12 0.006152 0.04486
GO:0003723 RNA binding 7.37% (7/95) 1.74 0.005147 0.045038
GO:0006897 endocytosis 2.11% (2/95) 4.13 0.006009 0.045071
GO:0016462 pyrophosphatase activity 5.26% (5/95) 2.16 0.005514 0.045233
GO:0017006 protein-tetrapyrrole linkage 1.05% (1/95) 7.34 0.006147 0.045454
GO:0003674 molecular_function 48.42% (46/95) 0.45 0.005986 0.045549
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.26% (5/95) 2.13 0.005916 0.045675
GO:0051171 regulation of nitrogen compound metabolic process 8.42% (8/95) 1.54 0.006415 0.046135
GO:0110165 cellular anatomical entity 28.42% (27/95) 0.69 0.006557 0.046521
GO:0009637 response to blue light 1.05% (1/95) 7.14 0.00709 0.046525
GO:0023051 regulation of signaling 2.11% (2/95) 4.01 0.007004 0.046548
GO:0005096 GTPase activator activity 2.11% (2/95) 3.99 0.007247 0.046968
GO:0010646 regulation of cell communication 2.11% (2/95) 4.01 0.006987 0.047029
GO:0009966 regulation of signal transduction 2.11% (2/95) 4.02 0.006902 0.047057
GO:0030120 vesicle coat 2.11% (2/95) 3.97 0.007404 0.047405
GO:0080090 regulation of primary metabolic process 8.42% (8/95) 1.53 0.006775 0.047422
GO:0008150 biological_process 40.0% (38/95) 0.52 0.006892 0.047607
GO:0035101 FACT complex 1.05% (1/95) 7.04 0.00756 0.047822
GO:0015858 nucleoside transport 1.05% (1/95) 6.95 0.008031 0.048463
GO:1901642 nucleoside transmembrane transport 1.05% (1/95) 6.95 0.008031 0.048463
GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex 1.05% (1/95) 6.9 0.008345 0.048677
GO:0004857 enzyme inhibitor activity 2.11% (2/95) 3.9 0.008179 0.048794
GO:0016192 vesicle-mediated transport 4.21% (4/95) 2.36 0.007932 0.048993
GO:0140678 molecular function inhibitor activity 2.11% (2/95) 3.88 0.008308 0.049009
GO:1990879 CST complex 1.05% (1/95) 6.98 0.007874 0.049214
GO:0043153 entrainment of circadian clock by photoperiod 1.05% (1/95) 6.82 0.008815 0.049232
GO:0032922 circadian regulation of gene expression 1.05% (1/95) 6.82 0.008815 0.049232
GO:0009648 photoperiodism 1.05% (1/95) 6.82 0.008815 0.049232
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (95) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms