Coexpression cluster: Cluster_9744 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 50.0% (1/2) 15.39 2.3e-05 0.001219
GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening 50.0% (1/2) 15.39 2.3e-05 0.001219
GO:0045948 positive regulation of translational initiation 50.0% (1/2) 15.39 2.3e-05 0.001219
GO:0006446 regulation of translational initiation 50.0% (1/2) 13.74 7.3e-05 0.002874
GO:0003727 single-stranded RNA binding 50.0% (1/2) 9.72 0.001188 0.012432
GO:0010628 positive regulation of gene expression 50.0% (1/2) 9.56 0.001327 0.013026
GO:0006367 transcription initiation at RNA polymerase II promoter 50.0% (1/2) 10.08 0.000922 0.013155
GO:0031369 translation initiation factor binding 50.0% (1/2) 11.22 0.000419 0.013166
GO:0061013 regulation of mRNA catabolic process 50.0% (1/2) 9.95 0.001012 0.013234
GO:1903313 positive regulation of mRNA metabolic process 50.0% (1/2) 9.72 0.001184 0.013283
GO:0061014 positive regulation of mRNA catabolic process 50.0% (1/2) 10.13 0.000892 0.014001
GO:0031331 positive regulation of cellular catabolic process 50.0% (1/2) 10.13 0.000892 0.014001
GO:0005665 RNA polymerase II, core complex 50.0% (1/2) 9.73 0.001178 0.014224
GO:0006352 DNA-templated transcription initiation 50.0% (1/2) 8.85 0.002162 0.01543
GO:0031329 regulation of cellular catabolic process 50.0% (1/2) 8.91 0.002072 0.015494
GO:0009896 positive regulation of catabolic process 50.0% (1/2) 8.75 0.002322 0.015848
GO:0055029 nuclear DNA-directed RNA polymerase complex 50.0% (1/2) 8.69 0.002428 0.015884
GO:0035770 ribonucleoprotein granule 50.0% (1/2) 8.94 0.002032 0.015955
GO:1903311 regulation of mRNA metabolic process 50.0% (1/2) 9.08 0.001846 0.016104
GO:0000932 P-body 50.0% (1/2) 9.13 0.001786 0.016498
GO:0036464 cytoplasmic ribonucleoprotein granule 50.0% (1/2) 8.96 0.002003 0.016547
GO:0006417 regulation of translation 50.0% (1/2) 8.38 0.003 0.01682
GO:0034248 regulation of amide metabolic process 50.0% (1/2) 8.38 0.003 0.01682
GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic 50.0% (1/2) 10.14 0.000888 0.017435
GO:0051247 positive regulation of protein metabolic process 50.0% (1/2) 8.26 0.003252 0.017607
GO:0000428 DNA-directed RNA polymerase complex 50.0% (1/2) 8.47 0.002814 0.01767
GO:0030880 RNA polymerase complex 50.0% (1/2) 8.21 0.003385 0.017716
GO:0000956 nuclear-transcribed mRNA catabolic process 50.0% (1/2) 8.41 0.002937 0.017733
GO:0006402 mRNA catabolic process 50.0% (1/2) 8.1 0.003648 0.018474
GO:0009894 regulation of catabolic process 50.0% (1/2) 8.02 0.00385 0.018891
GO:0003697 single-stranded DNA binding 50.0% (1/2) 7.95 0.00405 0.019266
GO:0034250 positive regulation of amide metabolic process 50.0% (1/2) 10.17 0.000868 0.019478
GO:0045727 positive regulation of translation 50.0% (1/2) 10.17 0.000868 0.019478
GO:0006401 RNA catabolic process 50.0% (1/2) 7.85 0.004319 0.019942
GO:0005768 endosome 50.0% (1/2) 7.7 0.004793 0.021502
GO:0034655 nucleobase-containing compound catabolic process 50.0% (1/2) 6.95 0.008045 0.022964
GO:0010629 negative regulation of gene expression 50.0% (1/2) 6.93 0.0082 0.02299
GO:0031982 vesicle 50.0% (1/2) 6.97 0.007935 0.023071
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.023147
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.023147
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.023147
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.023349
GO:0046700 heterocycle catabolic process 50.0% (1/2) 6.83 0.00877 0.023741
GO:0044270 cellular nitrogen compound catabolic process 50.0% (1/2) 6.83 0.00877 0.023741
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.023906
GO:0019001 guanyl nucleotide binding 50.0% (1/2) 7.07 0.007438 0.024328
GO:0032774 RNA biosynthetic process 50.0% (1/2) 6.76 0.009188 0.024449
GO:0061695 transferase complex, transferring phosphorus-containing groups 50.0% (1/2) 7.07 0.007405 0.024735
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.024882
GO:0051246 regulation of protein metabolic process 50.0% (1/2) 7.08 0.007362 0.025126
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.025178
GO:0005525 GTP binding 50.0% (1/2) 7.11 0.007219 0.025186
GO:0032561 guanyl ribonucleotide binding 50.0% (1/2) 7.11 0.007219 0.025186
GO:0099080 supramolecular complex 50.0% (1/2) 7.21 0.006758 0.025262
GO:0003924 GTPase activity 50.0% (1/2) 7.17 0.006924 0.02528
GO:0019439 aromatic compound catabolic process 50.0% (1/2) 6.66 0.009867 0.025395
GO:1901361 organic cyclic compound catabolic process 50.0% (1/2) 6.63 0.010039 0.025421
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.025469
GO:0010608 post-transcriptional regulation of gene expression 50.0% (1/2) 7.42 0.005846 0.025494
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.025533
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.025573
GO:0016071 mRNA metabolic process 50.0% (1/2) 6.44 0.011512 0.02582
GO:0009890 negative regulation of biosynthetic process 50.0% (1/2) 6.52 0.010903 0.025936
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.0261
GO:0009892 negative regulation of metabolic process 50.0% (1/2) 6.36 0.012151 0.026132
GO:0031327 negative regulation of cellular biosynthetic process 50.0% (1/2) 6.52 0.010857 0.026223
GO:0010558 negative regulation of macromolecule biosynthetic process 50.0% (1/2) 6.56 0.010552 0.026297
GO:0010605 negative regulation of macromolecule metabolic process 50.0% (1/2) 6.39 0.011893 0.026298
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.026349
GO:0031324 negative regulation of cellular metabolic process 50.0% (1/2) 6.37 0.012084 0.026351
GO:0031410 cytoplasmic vesicle 50.0% (1/2) 7.23 0.006629 0.026685
GO:0097708 intracellular vesicle 50.0% (1/2) 7.23 0.006629 0.026685
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.027295
GO:0006351 DNA-templated transcription 50.0% (1/2) 7.28 0.006446 0.027353
GO:0048523 negative regulation of cellular process 50.0% (1/2) 5.99 0.015713 0.032893
GO:0048519 negative regulation of biological process 50.0% (1/2) 5.96 0.015994 0.03304
GO:0016192 vesicle-mediated transport 50.0% (1/2) 5.93 0.016314 0.033264
GO:0034654 nucleobase-containing compound biosynthetic process 50.0% (1/2) 5.87 0.017053 0.034326
GO:0009057 macromolecule catabolic process 50.0% (1/2) 5.79 0.017997 0.035319
GO:0140535 intracellular protein-containing complex 50.0% (1/2) 5.8 0.017832 0.035438
GO:1990234 transferase complex 50.0% (1/2) 5.75 0.018468 0.035797
GO:0044248 cellular catabolic process 50.0% (1/2) 5.61 0.020327 0.038919
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.038987
GO:0017111 ribonucleoside triphosphate phosphatase activity 50.0% (1/2) 5.5 0.021944 0.040532
GO:0018130 heterocycle biosynthetic process 50.0% (1/2) 5.51 0.021868 0.040873
GO:0019438 aromatic compound biosynthetic process 50.0% (1/2) 5.43 0.022991 0.041971
GO:0016462 pyrophosphatase activity 50.0% (1/2) 5.4 0.023467 0.042349
GO:0016817 hydrolase activity, acting on acid anhydrides 50.0% (1/2) 5.37 0.024095 0.042506
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 50.0% (1/2) 5.38 0.023869 0.042584
GO:0009059 macromolecule biosynthetic process 50.0% (1/2) 5.31 0.025098 0.04283
GO:0043228 non-membrane-bounded organelle 50.0% (1/2) 5.32 0.024835 0.042847
GO:1901362 organic cyclic compound biosynthetic process 50.0% (1/2) 5.29 0.025476 0.043008
GO:0043232 intracellular non-membrane-bounded organelle 50.0% (1/2) 5.32 0.024832 0.043318
GO:0140513 nuclear protein-containing complex 50.0% (1/2) 5.07 0.029605 0.049446
GO:0044271 cellular nitrogen compound biosynthetic process 50.0% (1/2) 5.04 0.030182 0.049879
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms