Coexpression cluster: Cluster_2498 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042546 cell wall biogenesis 4.65% (4/86) 4.54 3e-05 0.001348
GO:0030276 clathrin binding 3.49% (3/86) 5.89 2e-05 0.001355
GO:0051273 beta-glucan metabolic process 4.65% (4/86) 4.76 1.7e-05 0.001362
GO:0030243 cellulose metabolic process 4.65% (4/86) 5.09 7e-06 0.001384
GO:0008150 biological_process 48.84% (42/86) 0.81 2.8e-05 0.001458
GO:0015976 carbon utilization 2.33% (2/86) 7.84 3.7e-05 0.00151
GO:0030060 L-malate dehydrogenase activity 2.33% (2/86) 7.68 4.6e-05 0.001566
GO:0071669 plant-type cell wall organization or biogenesis 4.65% (4/86) 4.57 2.7e-05 0.001597
GO:0009250 glucan biosynthetic process 4.65% (4/86) 4.39 4.4e-05 0.001636
GO:0051274 beta-glucan biosynthetic process 4.65% (4/86) 4.76 1.7e-05 0.001695
GO:0006107 oxaloacetate metabolic process 2.33% (2/86) 7.45 6.4e-05 0.002003
GO:0009832 plant-type cell wall biogenesis 4.65% (4/86) 4.78 1.6e-05 0.002119
GO:0030244 cellulose biosynthetic process 4.65% (4/86) 5.09 7e-06 0.002755
GO:0000271 polysaccharide biosynthetic process 4.65% (4/86) 4.08 0.000101 0.002965
GO:0006897 endocytosis 3.49% (3/86) 4.86 0.000165 0.003083
GO:0016759 cellulose synthase activity 3.49% (3/86) 4.86 0.000164 0.003204
GO:0016020 membrane 17.44% (15/86) 1.54 0.00018 0.00321
GO:0071554 cell wall organization or biogenesis 4.65% (4/86) 3.93 0.000152 0.003274
GO:0044085 cellular component biogenesis 4.65% (4/86) 3.9 0.000161 0.003294
GO:0016760 cellulose synthase (UDP-forming) activity 3.49% (3/86) 4.91 0.000149 0.003385
GO:0005905 clathrin-coated pit 2.33% (2/86) 6.56 0.000217 0.003563
GO:0004089 carbonate dehydratase activity 2.33% (2/86) 6.84 0.000148 0.003563
GO:0071840 cellular component organization or biogenesis 11.63% (10/86) 1.98 0.000228 0.003597
GO:0044042 glucan metabolic process 4.65% (4/86) 3.98 0.000132 0.003616
GO:0009987 cellular process 34.88% (30/86) 0.92 0.000217 0.003701
GO:0030136 clathrin-coated vesicle 2.33% (2/86) 6.4 0.000273 0.003731
GO:0009833 plant-type primary cell wall biogenesis 3.49% (3/86) 4.91 0.000147 0.00376
GO:0046554 malate dehydrogenase (NADP+) activity 1.16% (1/86) 11.77 0.000286 0.003785
GO:0048268 clathrin coat assembly 2.33% (2/86) 6.43 0.00026 0.003808
GO:0005545 1-phosphatidylinositol binding 2.33% (2/86) 6.43 0.00026 0.003808
GO:0032050 clathrin heavy chain binding 2.33% (2/86) 6.4 0.00027 0.003814
GO:0006734 NADH metabolic process 2.33% (2/86) 6.29 0.000317 0.004064
GO:0016051 carbohydrate biosynthetic process 4.65% (4/86) 3.6 0.00036 0.004347
GO:0098657 import into cell 3.49% (3/86) 4.48 0.000356 0.004417
GO:0098590 plasma membrane region 2.33% (2/86) 6.09 0.000415 0.004866
GO:0005976 polysaccharide metabolic process 4.65% (4/86) 3.49 0.000471 0.005363
GO:0006108 malate metabolic process 2.33% (2/86) 5.91 0.000531 0.005883
GO:0016615 malate dehydrogenase activity 2.33% (2/86) 5.87 0.000563 0.006076
GO:0016757 glycosyltransferase activity 6.98% (6/86) 2.55 0.000595 0.006097
GO:0008378 galactosyltransferase activity 2.33% (2/86) 5.79 0.000625 0.006106
GO:0110165 cellular anatomical entity 32.56% (28/86) 0.88 0.000613 0.006133
GO:0016758 hexosyltransferase activity 5.81% (5/86) 2.9 0.000591 0.006211
GO:0051179 localization 12.79% (11/86) 1.67 0.000678 0.006316
GO:0072583 clathrin-dependent endocytosis 2.33% (2/86) 5.75 0.000665 0.006345
GO:0006900 vesicle budding from membrane 2.33% (2/86) 5.55 0.000871 0.00794
GO:0005575 cellular_component 34.88% (30/86) 0.8 0.000908 0.008097
GO:0030135 coated vesicle 2.33% (2/86) 5.44 0.001022 0.008913
GO:0005543 phospholipid binding 3.49% (3/86) 3.91 0.0011 0.009394
GO:0006898 receptor-mediated endocytosis 2.33% (2/86) 5.35 0.001144 0.009569
GO:0019674 NAD metabolic process 2.33% (2/86) 5.33 0.001184 0.009705
GO:0005802 trans-Golgi network 3.49% (3/86) 3.81 0.001341 0.010777
GO:0015914 phospholipid transport 2.33% (2/86) 5.19 0.001422 0.011211
GO:0005886 plasma membrane 8.14% (7/86) 2.05 0.00158 0.01222
GO:0098791 Golgi apparatus subcompartment 3.49% (3/86) 3.68 0.001724 0.013088
GO:0051234 establishment of localization 11.63% (10/86) 1.58 0.001855 0.013341
GO:0005975 carbohydrate metabolic process 6.98% (6/86) 2.22 0.001891 0.013368
GO:0031984 organelle subcompartment 3.49% (3/86) 3.65 0.001846 0.013517
GO:0006099 tricarboxylic acid cycle 2.33% (2/86) 5.0 0.001844 0.013744
GO:0061024 membrane organization 3.49% (3/86) 3.61 0.002 0.013901
GO:0009991 response to extracellular stimulus 2.33% (2/86) 4.83 0.002345 0.015765
GO:0031667 response to nutrient levels 2.33% (2/86) 4.83 0.002336 0.015964
GO:0008194 UDP-glycosyltransferase activity 4.65% (4/86) 2.79 0.002777 0.018361
GO:0097708 intracellular vesicle 3.49% (3/86) 3.39 0.003045 0.019509
GO:0031410 cytoplasmic vesicle 3.49% (3/86) 3.39 0.003045 0.019509
GO:0005546 phosphatidylinositol-4,5-bisphosphate binding 2.33% (2/86) 4.53 0.00352 0.0222
GO:0015748 organophosphate ester transport 2.33% (2/86) 4.5 0.003645 0.022641
GO:0022402 cell cycle process 4.65% (4/86) 2.65 0.003936 0.024086
GO:1902936 phosphatidylinositol bisphosphate binding 2.33% (2/86) 4.41 0.004117 0.024823
GO:0035251 UDP-glucosyltransferase activity 3.49% (3/86) 3.23 0.00421 0.025015
GO:1990966 ATP generation from poly-ADP-D-ribose 1.16% (1/86) 7.73 0.004712 0.026832
GO:0004649 poly(ADP-ribose) glycohydrolase activity 1.16% (1/86) 7.68 0.004854 0.026896
GO:1901981 phosphatidylinositol phosphate binding 2.33% (2/86) 4.29 0.004797 0.026941
GO:0006810 transport 10.47% (9/86) 1.5 0.004669 0.026961
GO:0044237 cellular metabolic process 22.09% (19/86) 0.91 0.004607 0.026985
GO:0016836 hydro-lyase activity 2.33% (2/86) 4.25 0.005088 0.027447
GO:0006796 phosphate-containing compound metabolic process 11.63% (10/86) 1.38 0.005155 0.027447
GO:0031982 vesicle 3.49% (3/86) 3.13 0.005024 0.027465
GO:0016192 vesicle-mediated transport 4.65% (4/86) 2.51 0.005605 0.028025
GO:0008289 lipid binding 3.49% (3/86) 3.1 0.005404 0.028044
GO:1903047 mitotic cell cycle process 3.49% (3/86) 3.08 0.00555 0.028094
GO:0006793 phosphorus metabolic process 11.63% (10/86) 1.37 0.005364 0.028193
GO:0000149 SNARE binding 2.33% (2/86) 4.19 0.005511 0.028244
GO:0016050 vesicle organization 2.33% (2/86) 4.11 0.006183 0.030177
GO:0030120 vesicle coat 2.33% (2/86) 4.11 0.006109 0.030179
GO:0000139 Golgi membrane 2.33% (2/86) 4.04 0.006751 0.032566
GO:0005319 lipid transporter activity 2.33% (2/86) 4.02 0.006936 0.033066
GO:0046527 glucosyltransferase activity 3.49% (3/86) 2.94 0.007199 0.033925
GO:0043648 dicarboxylic acid metabolic process 2.33% (2/86) 3.97 0.007407 0.034121
GO:0046658 obsolete anchored component of plasma membrane 2.33% (2/86) 3.97 0.007391 0.034435
GO:0008152 metabolic process 26.74% (23/86) 0.74 0.007848 0.035752
GO:0035091 phosphatidylinositol binding 2.33% (2/86) 3.87 0.008509 0.038338
GO:0006163 purine nucleotide metabolic process 3.49% (3/86) 2.83 0.008911 0.038869
GO:0030117 membrane coat 2.33% (2/86) 3.84 0.008817 0.038871
GO:0006869 lipid transport 2.33% (2/86) 3.84 0.008783 0.03914
GO:0072542 protein phosphatase activator activity 1.16% (1/86) 6.64 0.009969 0.040072
GO:0019211 phosphatase activator activity 1.16% (1/86) 6.64 0.009969 0.040072
GO:0034410 cell wall beta-glucan biosynthetic process 1.16% (1/86) 6.66 0.009827 0.040292
GO:0052324 plant-type cell wall cellulose biosynthetic process 1.16% (1/86) 6.66 0.009827 0.040292
GO:0034406 cell wall beta-glucan metabolic process 1.16% (1/86) 6.66 0.009827 0.040292
GO:0052541 plant-type cell wall cellulose metabolic process 1.16% (1/86) 6.66 0.009827 0.040292
GO:0044238 primary metabolic process 24.42% (21/86) 0.76 0.009378 0.040474
GO:0004305 ethanolamine kinase activity 1.16% (1/86) 6.7 0.009544 0.04076
GO:0006470 protein dephosphorylation 2.33% (2/86) 3.7 0.010598 0.041782
GO:0072521 purine-containing compound metabolic process 3.49% (3/86) 2.74 0.010534 0.041933
GO:0044805 obsolete late nucleophagy 1.16% (1/86) 6.43 0.011527 0.044584
GO:0030289 protein phosphatase 4 complex 1.16% (1/86) 6.43 0.011527 0.044584
GO:0010215 cellulose microfibril organization 1.16% (1/86) 6.31 0.012517 0.047081
GO:0043067 regulation of programmed cell death 1.16% (1/86) 6.31 0.012517 0.047081
GO:0005776 autophagosome 1.16% (1/86) 6.31 0.012517 0.047081
GO:0030118 clathrin coat 1.16% (1/86) 6.26 0.012941 0.047799
GO:0030125 clathrin vesicle coat 1.16% (1/86) 6.26 0.012941 0.047799
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (86) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms