Coexpression cluster: Cluster_3718 (Co-expression clusters of Correr et al 2020 (PRJEB38368))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009987 cellular process 39.09% (43/110) 1.09 0.0 7.7e-05
GO:0051641 cellular localization 10.0% (11/110) 2.92 0.0 9.7e-05
GO:0032991 protein-containing complex 17.27% (19/110) 1.9 1e-06 0.000126
GO:0008150 biological_process 50.91% (56/110) 0.87 0.0 0.00018
GO:0005575 cellular_component 39.09% (43/110) 0.97 3e-06 0.000444
GO:0003674 molecular_function 56.36% (62/110) 0.67 6e-06 0.000482
GO:0050789 regulation of biological process 17.27% (19/110) 1.71 5e-06 0.00051
GO:0051668 localization within membrane 4.55% (5/110) 4.4 5e-06 0.000532
GO:0016043 cellular component organization 11.82% (13/110) 2.16 7e-06 0.000575
GO:0033036 macromolecule localization 7.27% (8/110) 2.96 1e-05 0.000597
GO:0070727 cellular macromolecule localization 7.27% (8/110) 2.96 1e-05 0.000643
GO:0008104 protein localization 7.27% (8/110) 2.96 1e-05 0.000695
GO:0065007 biological regulation 17.27% (19/110) 1.6 1.4e-05 0.000745
GO:0031325 positive regulation of cellular metabolic process 5.45% (6/110) 3.52 1.6e-05 0.000809
GO:0051171 regulation of nitrogen compound metabolic process 11.82% (13/110) 2.03 1.9e-05 0.000828
GO:0031227 obsolete intrinsic component of endoplasmic reticulum membrane 1.82% (2/110) 8.33 1.9e-05 0.000856
GO:0060255 regulation of macromolecule metabolic process 12.73% (14/110) 1.9 2.4e-05 0.000858
GO:0080090 regulation of primary metabolic process 11.82% (13/110) 2.02 2.1e-05 0.000859
GO:0071840 cellular component organization or biogenesis 11.82% (13/110) 2.0 2.3e-05 0.0009
GO:0009893 positive regulation of metabolic process 5.45% (6/110) 3.3 3.8e-05 0.000939
GO:0010604 positive regulation of macromolecule metabolic process 5.45% (6/110) 3.3 3.8e-05 0.000971
GO:0030242 autophagy of peroxisome 1.82% (2/110) 7.86 3.6e-05 0.000988
GO:0050794 regulation of cellular process 15.45% (17/110) 1.62 3.8e-05 0.001
GO:0048522 positive regulation of cellular process 5.45% (6/110) 3.34 3.2e-05 0.001014
GO:0019222 regulation of metabolic process 12.73% (14/110) 1.85 3.5e-05 0.001022
GO:0072657 protein localization to membrane 3.64% (4/110) 4.52 3.2e-05 0.001046
GO:0051173 positive regulation of nitrogen compound metabolic process 5.45% (6/110) 3.32 3.5e-05 0.001059
GO:0005488 binding 40.0% (44/110) 0.83 3.1e-05 0.001082
GO:0097159 organic cyclic compound binding 29.09% (32/110) 1.02 5.2e-05 0.001235
GO:0003989 acetyl-CoA carboxylase activity 1.82% (2/110) 7.51 5.8e-05 0.001346
GO:0000398 mRNA splicing, via spliceosome 3.64% (4/110) 4.2 7.4e-05 0.001647
GO:0048518 positive regulation of biological process 5.45% (6/110) 3.08 8.7e-05 0.00188
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 3.64% (4/110) 4.13 9.1e-05 0.001904
GO:0031323 regulation of cellular metabolic process 11.82% (13/110) 1.79 0.000105 0.002134
GO:0061919 process utilizing autophagic mechanism 2.73% (3/110) 5.0 0.000123 0.002306
GO:0006914 autophagy 2.73% (3/110) 5.0 0.000123 0.002306
GO:0000375 RNA splicing, via transesterification reactions 3.64% (4/110) 4.01 0.000123 0.002429
GO:0044877 protein-containing complex binding 5.45% (6/110) 2.9 0.000173 0.003148
GO:0005681 spliceosomal complex 3.64% (4/110) 3.86 0.000184 0.003258
GO:0016421 CoA carboxylase activity 1.82% (2/110) 6.53 0.000226 0.003815
GO:0016885 ligase activity, forming carbon-carbon bonds 1.82% (2/110) 6.51 0.000234 0.003851
GO:0008380 RNA splicing 3.64% (4/110) 3.78 0.000226 0.003902
GO:0003677 DNA binding 10.0% (11/110) 1.76 0.000423 0.0068
GO:0016071 mRNA metabolic process 4.55% (5/110) 2.98 0.000474 0.007449
GO:0005515 protein binding 17.27% (19/110) 1.21 0.000518 0.007633
GO:0051179 localization 11.82% (13/110) 1.55 0.000501 0.0077
GO:0043933 protein-containing complex organization 5.45% (6/110) 2.6 0.000516 0.007756
GO:0019219 regulation of nucleobase-containing compound metabolic process 9.09% (10/110) 1.83 0.000542 0.007814
GO:0009668 plastid membrane organization 1.82% (2/110) 5.87 0.000565 0.007817
GO:0010027 thylakoid membrane organization 1.82% (2/110) 5.87 0.000565 0.007817
GO:0007064 mitotic sister chromatid cohesion 1.82% (2/110) 5.83 0.000595 0.008075
GO:0000785 chromatin 2.73% (3/110) 4.2 0.000623 0.008134
GO:0042393 histone binding 2.73% (3/110) 4.19 0.000641 0.008218
GO:0010556 regulation of macromolecule biosynthetic process 10.0% (11/110) 1.69 0.000654 0.008226
GO:0010468 regulation of gene expression 10.0% (11/110) 1.7 0.000619 0.008232
GO:0006397 mRNA processing 3.64% (4/110) 3.36 0.000676 0.00836
GO:0035639 purine ribonucleoside triphosphate binding 13.64% (15/110) 1.37 0.000705 0.008564
GO:0009889 regulation of biosynthetic process 10.0% (11/110) 1.66 0.00076 0.008914
GO:0051246 regulation of protein metabolic process 3.64% (4/110) 3.3 0.00078 0.009001
GO:0051254 positive regulation of RNA metabolic process 3.64% (4/110) 3.28 0.00082 0.009009
GO:0031326 regulation of cellular biosynthetic process 10.0% (11/110) 1.66 0.000756 0.009014
GO:0005634 nucleus 10.91% (12/110) 1.56 0.000795 0.009019
GO:0044237 cellular metabolic process 22.73% (25/110) 0.95 0.000835 0.009025
GO:0003676 nucleic acid binding 15.45% (17/110) 1.23 0.000853 0.009081
GO:0016236 macroautophagy 1.82% (2/110) 5.6 0.000815 0.009093
GO:0010557 positive regulation of macromolecule biosynthetic process 3.64% (4/110) 3.24 0.000907 0.009227
GO:0031328 positive regulation of cellular biosynthetic process 3.64% (4/110) 3.24 0.000907 0.009227
GO:0009891 positive regulation of biosynthetic process 3.64% (4/110) 3.24 0.000907 0.009227
GO:0033365 protein localization to organelle 3.64% (4/110) 3.23 0.000933 0.009357
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 3.64% (4/110) 3.2 0.001004 0.009927
GO:0110165 cellular anatomical entity 30.0% (33/110) 0.76 0.00108 0.010526
GO:0046467 membrane lipid biosynthetic process 2.73% (3/110) 3.91 0.001112 0.010683
GO:0043226 organelle 17.27% (19/110) 1.08 0.001428 0.013003
GO:0017111 ribonucleoside triphosphate phosphatase activity 5.45% (6/110) 2.31 0.001452 0.013045
GO:0006643 membrane lipid metabolic process 2.73% (3/110) 3.79 0.001397 0.013066
GO:0003690 double-stranded DNA binding 4.55% (5/110) 2.63 0.001381 0.013092
GO:0043229 intracellular organelle 17.27% (19/110) 1.08 0.001426 0.01316
GO:0034728 nucleosome organization 1.82% (2/110) 5.16 0.001494 0.013255
GO:0003824 catalytic activity 30.0% (33/110) 0.73 0.001631 0.013934
GO:0031491 nucleosome binding 1.82% (2/110) 5.1 0.001621 0.014025
GO:0051252 regulation of RNA metabolic process 8.18% (9/110) 1.74 0.001621 0.014201
GO:0043227 membrane-bounded organelle 15.45% (17/110) 1.13 0.001861 0.015705
GO:0016462 pyrophosphatase activity 5.45% (6/110) 2.21 0.002034 0.016959
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.45% (6/110) 2.18 0.002214 0.017811
GO:0016192 vesicle-mediated transport 4.55% (5/110) 2.47 0.002212 0.018008
GO:0031207 Sec62/Sec63 complex 0.91% (1/110) 8.83 0.002194 0.018078
GO:0006505 GPI anchor metabolic process 1.82% (2/110) 4.79 0.002453 0.018252
GO:0006506 GPI anchor biosynthetic process 1.82% (2/110) 4.79 0.002453 0.018252
GO:0070972 protein localization to endoplasmic reticulum 1.82% (2/110) 4.77 0.002539 0.018301
GO:0045184 establishment of protein localization 4.55% (5/110) 2.44 0.002424 0.01843
GO:0008610 lipid biosynthetic process 4.55% (5/110) 2.43 0.002533 0.018449
GO:0016817 hydrolase activity, acting on acid anhydrides 5.45% (6/110) 2.17 0.00232 0.018454
GO:0008023 transcription elongation factor complex 1.82% (2/110) 4.81 0.002404 0.018488
GO:0032993 protein-DNA complex 2.73% (3/110) 3.53 0.002359 0.018549
GO:0007062 sister chromatid cohesion 1.82% (2/110) 4.81 0.002392 0.018602
GO:0046488 phosphatidylinositol metabolic process 2.73% (3/110) 3.49 0.002531 0.01863
GO:0006629 lipid metabolic process 6.36% (7/110) 1.91 0.002777 0.019809
GO:0044255 cellular lipid metabolic process 5.45% (6/110) 2.1 0.002903 0.020499
GO:0005524 ATP binding 11.82% (13/110) 1.26 0.003057 0.021366
GO:0080043 quercetin 3-O-glucosyltransferase activity 1.82% (2/110) 4.54 0.00346 0.023709
GO:0080044 quercetin 7-O-glucosyltransferase activity 1.82% (2/110) 4.54 0.00346 0.023709
GO:0030623 U5 snRNA binding 0.91% (1/110) 8.09 0.003655 0.024554
GO:0070274 RES complex 0.91% (1/110) 8.09 0.003655 0.024554
GO:0044232 organelle membrane contact site 0.91% (1/110) 7.96 0.004019 0.025058
GO:0005684 U2-type spliceosomal complex 1.82% (2/110) 4.45 0.003918 0.025105
GO:0046907 intracellular transport 4.55% (5/110) 2.29 0.003788 0.025204
GO:0061024 membrane organization 2.73% (3/110) 3.25 0.00401 0.025225
GO:0071561 nucleus-vacuole junction 0.91% (1/110) 8.02 0.003837 0.025288
GO:0006338 chromatin remodeling 2.73% (3/110) 3.26 0.003984 0.025292
GO:0017076 purine nucleotide binding 14.55% (16/110) 1.07 0.003913 0.025305
GO:0008152 metabolic process 26.36% (29/110) 0.72 0.003892 0.025407
GO:0043231 intracellular membrane-bounded organelle 14.55% (16/110) 1.05 0.00429 0.026505
GO:2001141 regulation of RNA biosynthetic process 7.27% (8/110) 1.64 0.004405 0.026507
GO:0006355 regulation of DNA-templated transcription 7.27% (8/110) 1.64 0.004405 0.026507
GO:0051649 establishment of localization in cell 4.55% (5/110) 2.24 0.004367 0.026743
GO:0030301 cholesterol transport 0.91% (1/110) 7.72 0.004749 0.027847
GO:0032367 intracellular cholesterol transport 0.91% (1/110) 7.72 0.004749 0.027847
GO:0006650 glycerophospholipid metabolic process 2.73% (3/110) 3.17 0.004733 0.028233
GO:0006996 organelle organization 5.45% (6/110) 1.95 0.00488 0.028379
GO:0045893 positive regulation of DNA-templated transcription 2.73% (3/110) 3.12 0.005175 0.029112
GO:1902680 positive regulation of RNA biosynthetic process 2.73% (3/110) 3.12 0.005175 0.029112
GO:0006325 chromatin organization 2.73% (3/110) 3.13 0.005054 0.029147
GO:0061709 reticulophagy 0.91% (1/110) 7.61 0.005113 0.02924
GO:0051052 regulation of DNA metabolic process 1.82% (2/110) 4.2 0.005484 0.030361
GO:0031090 organelle membrane 4.55% (5/110) 2.16 0.005552 0.030492
GO:0061666 UFM1 ligase activity 0.91% (1/110) 7.51 0.005477 0.030565
GO:0017070 U6 snRNA binding 0.91% (1/110) 7.37 0.006023 0.03231
GO:1901265 nucleoside phosphate binding 14.55% (16/110) 1.0 0.006021 0.032553
GO:0000166 nucleotide binding 14.55% (16/110) 1.0 0.006021 0.032553
GO:0003682 chromatin binding 2.73% (3/110) 3.02 0.00624 0.033217
GO:0140513 nuclear protein-containing complex 5.45% (6/110) 1.87 0.006304 0.033301
GO:0032555 purine ribonucleotide binding 13.64% (15/110) 1.03 0.0066 0.034082
GO:0044238 primary metabolic process 23.64% (26/110) 0.72 0.006588 0.034278
GO:0071568 UFM1 transferase activity 0.91% (1/110) 7.25 0.006569 0.034437
GO:0003924 GTPase activity 2.73% (3/110) 2.98 0.006823 0.034973
GO:0098588 bounding membrane of organelle 3.64% (4/110) 2.42 0.006936 0.035035
GO:0046486 glycerolipid metabolic process 2.73% (3/110) 2.96 0.007003 0.035116
GO:0051219 phosphoprotein binding 0.91% (1/110) 6.96 0.008023 0.035138
GO:1990564 protein polyufmylation 0.91% (1/110) 6.96 0.008023 0.035138
GO:0045309 protein phosphorylated amino acid binding 0.91% (1/110) 6.96 0.008023 0.035138
GO:1990592 protein K69-linked ufmylation 0.91% (1/110) 6.96 0.008023 0.035138
GO:0090150 establishment of protein localization to membrane 1.82% (2/110) 3.93 0.007847 0.035261
GO:0097157 pre-mRNA intronic binding 0.91% (1/110) 7.17 0.006933 0.035275
GO:0032553 ribonucleotide binding 13.64% (15/110) 1.02 0.007096 0.035327
GO:0036094 small molecule binding 14.55% (16/110) 0.95 0.008234 0.035389
GO:0019001 guanyl nucleotide binding 2.73% (3/110) 2.87 0.008292 0.035419
GO:1901031 regulation of response to reactive oxygen species 0.91% (1/110) 6.99 0.007841 0.035465
GO:1902882 regulation of response to oxidative stress 0.91% (1/110) 6.99 0.007841 0.035465
GO:0034066 Ric1-Rgp1 guanyl-nucleotide exchange factor complex 0.91% (1/110) 6.99 0.007841 0.035465
GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding 0.91% (1/110) 6.99 0.007841 0.035465
GO:0099122 RNA polymerase II C-terminal domain binding 0.91% (1/110) 6.99 0.007841 0.035465
GO:0050815 phosphoserine residue binding 0.91% (1/110) 6.99 0.007841 0.035465
GO:0030619 U1 snRNA binding 0.91% (1/110) 6.92 0.008204 0.035484
GO:0006497 protein lipidation 1.82% (2/110) 3.9 0.008164 0.035532
GO:0032366 intracellular sterol transport 0.91% (1/110) 6.89 0.008386 0.035602
GO:1990316 Atg1/ULK1 kinase complex 0.91% (1/110) 7.02 0.00766 0.036304
GO:0071704 organic substance metabolic process 24.55% (27/110) 0.68 0.007523 0.036404
GO:0009247 glycolipid biosynthetic process 1.82% (2/110) 3.97 0.007372 0.03644
GO:0097367 carbohydrate derivative binding 13.64% (15/110) 1.01 0.007584 0.036447
GO:1901363 heterocyclic compound binding 14.55% (16/110) 0.96 0.007744 0.036454
GO:0006664 glycolipid metabolic process 1.82% (2/110) 3.96 0.007495 0.036524
GO:1903509 liposaccharide metabolic process 1.82% (2/110) 3.96 0.007495 0.036524
GO:0098796 membrane protein complex 3.64% (4/110) 2.38 0.007654 0.03653
GO:0061775 cohesin loader activity 0.91% (1/110) 6.8 0.00893 0.037682
GO:0004425 indole-3-glycerol-phosphate synthase activity 0.91% (1/110) 6.77 0.009112 0.037985
GO:0030620 U2 snRNA binding 0.91% (1/110) 6.77 0.009112 0.037985
GO:0048208 COPII vesicle coating 0.91% (1/110) 6.74 0.009293 0.038509
GO:0071824 protein-DNA complex organization 2.73% (3/110) 2.81 0.009352 0.038521
GO:0055072 obsolete iron ion homeostasis 0.91% (1/110) 6.69 0.009656 0.039538
GO:0031982 vesicle 2.73% (3/110) 2.78 0.009877 0.039738
GO:0071569 protein ufmylation 0.91% (1/110) 6.66 0.009837 0.039809
GO:0055037 recycling endosome 0.91% (1/110) 6.66 0.009837 0.039809
GO:0140673 transcription elongation-coupled chromatin remodeling 0.91% (1/110) 6.63 0.010019 0.040074
GO:0001664 G protein-coupled receptor binding 0.91% (1/110) 6.58 0.010381 0.041285
GO:0051234 establishment of localization 9.09% (10/110) 1.23 0.010687 0.04202
GO:0006633 fatty acid biosynthetic process 1.82% (2/110) 3.7 0.010636 0.042059
GO:1905360 GTPase complex 0.91% (1/110) 6.48 0.011106 0.042694
GO:0005834 heterotrimeric G-protein complex 0.91% (1/110) 6.48 0.011106 0.042694
GO:0015976 carbon utilization 0.91% (1/110) 6.48 0.011106 0.042694
GO:0006396 RNA processing 4.55% (5/110) 1.92 0.010936 0.042755
GO:0060090 molecular adaptor activity 1.82% (2/110) 3.64 0.011517 0.044031
GO:0004640 phosphoribosylanthranilate isomerase activity 0.91% (1/110) 6.35 0.012191 0.044169
GO:0031683 G-protein beta/gamma-subunit complex binding 0.91% (1/110) 6.35 0.012191 0.044169
GO:0022607 cellular component assembly 3.64% (4/110) 2.18 0.012318 0.044397
GO:0006661 phosphatidylinositol biosynthetic process 1.82% (2/110) 3.58 0.012402 0.044468
GO:0022411 cellular component disassembly 1.82% (2/110) 3.6 0.012146 0.044472
GO:0006417 regulation of translation 1.82% (2/110) 3.6 0.012121 0.044615
GO:0034248 regulation of amide metabolic process 1.82% (2/110) 3.6 0.012121 0.044615
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway 0.91% (1/110) 6.37 0.01201 0.044684
GO:0000244 spliceosomal tri-snRNP complex assembly 0.91% (1/110) 6.37 0.01201 0.044684
GO:0032544 plastid translation 0.91% (1/110) 6.37 0.01201 0.044684
GO:0031492 nucleosomal DNA binding 0.91% (1/110) 6.39 0.011829 0.044732
GO:0070973 protein localization to endoplasmic reticulum exit site 0.91% (1/110) 6.39 0.011829 0.044732
GO:0006901 vesicle coating 0.91% (1/110) 6.27 0.012914 0.046066
GO:0099022 vesicle tethering 0.91% (1/110) 6.25 0.013095 0.046233
GO:0090522 vesicle tethering involved in exocytosis 0.91% (1/110) 6.25 0.013095 0.046233
GO:0071763 nuclear membrane organization 0.91% (1/110) 6.23 0.013276 0.046634
GO:0034045 phagophore assembly site membrane 0.91% (1/110) 6.13 0.014179 0.048096
GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I 0.91% (1/110) 6.13 0.014179 0.048096
GO:0034272 phosphatidylinositol 3-kinase complex, class III, type II 0.91% (1/110) 6.13 0.014179 0.048096
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 0.91% (1/110) 6.13 0.014179 0.048096
GO:0016237 microautophagy 0.91% (1/110) 6.15 0.013998 0.048677
GO:0034727 piecemeal microautophagy of the nucleus 0.91% (1/110) 6.15 0.013998 0.048677
GO:0051247 positive regulation of protein metabolic process 1.82% (2/110) 3.48 0.014123 0.048866
GO:0006620 post-translational protein targeting to endoplasmic reticulum membrane 0.91% (1/110) 6.08 0.01472 0.049447
GO:0006644 phospholipid metabolic process 2.73% (3/110) 2.56 0.014664 0.049501
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (110) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms