Coexpression cluster: Cluster_10901 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 100.0% (2/2) 8.52 7e-06 6.3e-05
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 100.0% (2/2) 8.61 7e-06 7.4e-05
GO:0000987 cis-regulatory region sequence-specific DNA binding 100.0% (2/2) 8.75 5e-06 9.2e-05
GO:1990837 sequence-specific double-stranded DNA binding 100.0% (2/2) 7.67 2.4e-05 0.000118
GO:0000976 transcription cis-regulatory region binding 100.0% (2/2) 7.77 2.1e-05 0.000118
GO:0001067 transcription regulatory region nucleic acid binding 100.0% (2/2) 7.77 2.1e-05 0.000118
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 100.0% (2/2) 8.84 5e-06 0.000162
GO:0006357 regulation of transcription by RNA polymerase II 100.0% (2/2) 7.24 4.4e-05 0.000187
GO:0003690 double-stranded DNA binding 100.0% (2/2) 7.09 5.4e-05 0.000204
GO:0043565 sequence-specific DNA binding 100.0% (2/2) 6.63 0.000102 0.000347
GO:0003700 DNA-binding transcription factor activity 100.0% (2/2) 6.22 0.00018 0.000557
GO:0140110 transcription regulator activity 100.0% (2/2) 5.97 0.000256 0.000726
GO:2001141 regulation of RNA biosynthetic process 100.0% (2/2) 5.42 0.000545 0.001325
GO:0006355 regulation of DNA-templated transcription 100.0% (2/2) 5.42 0.000545 0.001325
GO:0051252 regulation of RNA metabolic process 100.0% (2/2) 5.35 0.000603 0.001366
GO:0019219 regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 5.29 0.000652 0.001386
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 4.98 0.001001 0.001479
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 4.98 0.000999 0.001544
GO:0003677 DNA binding 100.0% (2/2) 5.09 0.000868 0.001553
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 5.01 0.000964 0.001562
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 4.87 0.001171 0.001593
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 5.1 0.000853 0.001611
GO:0010468 regulation of gene expression 100.0% (2/2) 5.02 0.000951 0.001618
GO:0019222 regulation of metabolic process 100.0% (2/2) 4.82 0.001247 0.001631
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 4.88 0.001157 0.001639
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 5.11 0.000837 0.001674
GO:0050794 regulation of cellular process 100.0% (2/2) 4.31 0.002541 0.0032
GO:0050789 regulation of biological process 100.0% (2/2) 4.24 0.002804 0.003405
GO:0065007 biological regulation 100.0% (2/2) 4.14 0.003232 0.003789
GO:0003676 nucleic acid binding 100.0% (2/2) 3.93 0.004321 0.004897
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.022606
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms