Coexpression cluster: Cluster_733 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030272 5-formyltetrahydrofolate cyclo-ligase activity 3.23% (3/93) 10.24 0.0 1e-06
GO:0045296 cadherin binding 3.23% (3/93) 9.78 0.0 1e-06
GO:0050839 cell adhesion molecule binding 3.23% (3/93) 9.2 0.0 2e-06
GO:0051170 import into nucleus 5.38% (5/93) 5.58 0.0 5e-06
GO:0034504 protein localization to nucleus 5.38% (5/93) 5.6 0.0 6e-06
GO:0006606 protein import into nucleus 5.38% (5/93) 5.6 0.0 6e-06
GO:0016882 cyclo-ligase activity 3.23% (3/93) 7.78 0.0 1.8e-05
GO:0008936 nicotinamidase activity 2.15% (2/93) 11.07 0.0 1.9e-05
GO:0035999 tetrahydrofolate interconversion 3.23% (3/93) 7.63 1e-06 2.2e-05
GO:0009396 folic acid-containing compound biosynthetic process 3.23% (3/93) 6.97 2e-06 6.6e-05
GO:0046653 tetrahydrofolate metabolic process 3.23% (3/93) 6.99 2e-06 6.8e-05
GO:0006730 one-carbon metabolic process 3.23% (3/93) 7.03 2e-06 6.9e-05
GO:0042559 pteridine-containing compound biosynthetic process 3.23% (3/93) 6.87 3e-06 7.5e-05
GO:0006913 nucleocytoplasmic transport 5.38% (5/93) 4.31 6e-06 0.000145
GO:0051169 nuclear transport 5.38% (5/93) 4.31 6e-06 0.000145
GO:0005739 mitochondrion 7.53% (7/93) 3.36 6e-06 0.000165
GO:0042398 cellular modified amino acid biosynthetic process 3.23% (3/93) 6.21 1e-05 0.000223
GO:0006760 folic acid-containing compound metabolic process 3.23% (3/93) 6.13 1.2e-05 0.000238
GO:0006886 intracellular protein transport 6.45% (6/93) 3.59 1.2e-05 0.00025
GO:0042558 pteridine-containing compound metabolic process 3.23% (3/93) 6.06 1.4e-05 0.000262
GO:0072594 establishment of protein localization to organelle 5.38% (5/93) 3.91 2.3e-05 0.000412
GO:0004576 oligosaccharyl transferase activity 2.15% (2/93) 8.07 2.7e-05 0.000449
GO:0046907 intracellular transport 7.53% (7/93) 3.02 2.8e-05 0.000455
GO:0051649 establishment of localization in cell 7.53% (7/93) 2.97 3.5e-05 0.000498
GO:0019365 pyridine nucleotide salvage 2.15% (2/93) 7.93 3.2e-05 0.000502
GO:0033365 protein localization to organelle 5.38% (5/93) 3.8 3.4e-05 0.000503
GO:0005654 nucleoplasm 3.23% (3/93) 5.49 4.5e-05 0.00058
GO:0017056 structural constituent of nuclear pore 3.23% (3/93) 5.5 4.5e-05 0.000592
GO:0015031 protein transport 6.45% (6/93) 3.25 4.4e-05 0.000603
GO:0006575 cellular modified amino acid metabolic process 3.23% (3/93) 5.25 7.4e-05 0.000916
GO:0003674 molecular_function 54.84% (51/93) 0.63 9.6e-05 0.001148
GO:0031080 nuclear pore outer ring 2.15% (2/93) 7.07 0.000107 0.001241
GO:0000973 post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery 2.15% (2/93) 6.93 0.00013 0.001467
GO:0045184 establishment of protein localization 6.45% (6/93) 2.95 0.00014 0.001529
GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity 2.15% (2/93) 6.66 0.00019 0.002016
GO:0050657 nucleic acid transport 3.23% (3/93) 4.6 0.000279 0.002352
GO:0050658 RNA transport 3.23% (3/93) 4.6 0.000279 0.002352
GO:0051236 establishment of RNA localization 3.23% (3/93) 4.6 0.000279 0.002352
GO:0033036 macromolecule localization 6.45% (6/93) 2.78 0.000256 0.002437
GO:0043173 nucleotide salvage 2.15% (2/93) 6.4 0.000271 0.002455
GO:0070727 cellular macromolecule localization 6.45% (6/93) 2.79 0.000254 0.002476
GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery 2.15% (2/93) 6.32 0.000304 0.002507
GO:0006405 RNA export from nucleus 3.23% (3/93) 4.61 0.000271 0.002513
GO:0051641 cellular localization 7.53% (7/93) 2.51 0.000251 0.002514
GO:0008104 protein localization 6.45% (6/93) 2.79 0.00025 0.002581
GO:0005575 cellular_component 35.48% (33/93) 0.83 0.000365 0.002944
GO:0043226 organelle 19.35% (18/93) 1.25 0.000476 0.003602
GO:0019363 pyridine nucleotide biosynthetic process 2.15% (2/93) 6.02 0.000458 0.003612
GO:0070006 metalloaminopeptidase activity 2.15% (2/93) 5.96 0.000495 0.003672
GO:0043229 intracellular organelle 19.35% (18/93) 1.25 0.000475 0.003673
GO:0035459 vesicle cargo loading 2.15% (2/93) 5.81 0.000615 0.004388
GO:0090110 COPII-coated vesicle cargo loading 2.15% (2/93) 5.81 0.000615 0.004388
GO:0071705 nitrogen compound transport 6.45% (6/93) 2.52 0.000669 0.00468
GO:0008270 zinc ion binding 6.45% (6/93) 2.49 0.000757 0.005198
GO:0072525 pyridine-containing compound biosynthetic process 2.15% (2/93) 5.59 0.000831 0.005608
GO:0030127 COPII vesicle coat 2.15% (2/93) 5.57 0.00085 0.00563
GO:0006265 DNA topological change 2.15% (2/93) 5.55 0.000868 0.005652
GO:0004177 aminopeptidase activity 2.15% (2/93) 5.5 0.000938 0.005901
GO:0051168 nuclear export 3.23% (3/93) 4.0 0.000928 0.005933
GO:0051276 chromosome organization 4.3% (4/93) 3.21 0.000985 0.005991
GO:0015931 nucleobase-containing compound transport 3.23% (3/93) 3.98 0.00097 0.005997
GO:0043094 cellular metabolic compound salvage 2.15% (2/93) 5.44 0.001011 0.006049
GO:0016879 ligase activity, forming carbon-nitrogen bonds 3.23% (3/93) 3.94 0.001049 0.006079
GO:0070971 endoplasmic reticulum exit site 2.15% (2/93) 5.42 0.001038 0.006113
GO:0110165 cellular anatomical entity 31.18% (29/93) 0.82 0.001079 0.006159
GO:0008235 metalloexopeptidase activity 2.15% (2/93) 5.31 0.001207 0.006788
GO:0003916 DNA topoisomerase activity 2.15% (2/93) 5.24 0.001327 0.00735
GO:0016409 palmitoyltransferase activity 2.15% (2/93) 5.19 0.001421 0.007752
GO:0043231 intracellular membrane-bounded organelle 16.13% (15/93) 1.2 0.002034 0.010939
GO:0071702 organic substance transport 6.45% (6/93) 2.19 0.002113 0.011199
GO:0052742 phosphatidylinositol kinase activity 2.15% (2/93) 4.87 0.002209 0.011383
GO:0043227 membrane-bounded organelle 16.13% (15/93) 1.19 0.002188 0.011432
GO:0051028 mRNA transport 2.15% (2/93) 4.79 0.00247 0.012221
GO:0006406 mRNA export from nucleus 2.15% (2/93) 4.79 0.00247 0.012221
GO:0046854 phosphatidylinositol phosphate biosynthetic process 2.15% (2/93) 4.79 0.00246 0.012503
GO:0090407 organophosphate biosynthetic process 4.3% (4/93) 2.82 0.002611 0.012747
GO:0005643 nuclear pore 2.15% (2/93) 4.6 0.003184 0.015343
GO:0042277 peptide binding 2.15% (2/93) 4.5 0.003629 0.017041
GO:0046914 transition metal ion binding 7.53% (7/93) 1.84 0.003595 0.017098
GO:0018130 heterocycle biosynthetic process 5.38% (5/93) 2.29 0.003748 0.01738
GO:0000304 response to singlet oxygen 1.08% (1/93) 7.96 0.004016 0.017951
GO:0010343 singlet oxygen-mediated programmed cell death 1.08% (1/93) 7.96 0.004016 0.017951
GO:0097468 programmed cell death in response to reactive oxygen species 1.08% (1/93) 7.96 0.004016 0.017951
GO:0009019 obsolete tRNA (guanine-N1-)-methyltransferase activity 1.08% (1/93) 7.9 0.00417 0.018202
GO:0002939 tRNA N1-guanine methylation 1.08% (1/93) 7.9 0.00417 0.018202
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 2.15% (2/93) 4.35 0.004448 0.019188
GO:0008150 biological_process 40.86% (38/93) 0.55 0.004552 0.019412
GO:0019438 aromatic compound biosynthetic process 5.38% (5/93) 2.22 0.004627 0.019507
GO:0070989 oxidative demethylation 1.08% (1/93) 7.53 0.005403 0.021552
GO:0035515 oxidative RNA demethylase activity 1.08% (1/93) 7.53 0.005403 0.021552
GO:0035513 oxidative RNA demethylation 1.08% (1/93) 7.53 0.005403 0.021552
GO:0035516 oxidative DNA demethylase activity 1.08% (1/93) 7.53 0.005403 0.021552
GO:0035552 oxidative single-stranded DNA demethylation 1.08% (1/93) 7.53 0.005403 0.021552
GO:0033218 amide binding 2.15% (2/93) 4.14 0.00589 0.023004
GO:0001727 lipid kinase activity 2.15% (2/93) 4.14 0.005875 0.023187
GO:2001141 regulation of RNA biosynthetic process 7.53% (7/93) 1.69 0.00625 0.023661
GO:0006355 regulation of DNA-templated transcription 7.53% (7/93) 1.69 0.00625 0.023661
GO:0000149 SNARE binding 2.15% (2/93) 4.08 0.006413 0.024031
GO:1901566 organonitrogen compound biosynthetic process 5.38% (5/93) 2.11 0.006227 0.024064
GO:0030120 vesicle coat 2.15% (2/93) 4.0 0.007107 0.026105
GO:1901362 organic cyclic compound biosynthetic process 5.38% (5/93) 2.07 0.007084 0.026283
GO:0006810 transport 9.68% (9/93) 1.38 0.007764 0.027964
GO:0000301 retrograde transport, vesicle recycling within Golgi 1.08% (1/93) 7.01 0.007709 0.02804
GO:0051252 regulation of RNA metabolic process 7.53% (7/93) 1.62 0.008117 0.028955
GO:0009987 cellular process 29.03% (27/93) 0.66 0.00845 0.029856
GO:0006661 phosphatidylinositol biosynthetic process 2.15% (2/93) 3.82 0.009002 0.031211
GO:0071103 DNA conformation change 2.15% (2/93) 3.83 0.008945 0.031308
GO:0019219 regulation of nucleobase-containing compound metabolic process 7.53% (7/93) 1.56 0.009944 0.033847
GO:0034457 Mpp10 complex 1.08% (1/93) 6.66 0.009857 0.033861
GO:0005198 structural molecule activity 3.23% (3/93) 2.76 0.010263 0.033998
GO:0030117 membrane coat 2.15% (2/93) 3.73 0.010243 0.034236
GO:0006996 organelle organization 5.38% (5/93) 1.93 0.010483 0.034419
GO:0051234 establishment of localization 9.68% (9/93) 1.32 0.010225 0.034485
GO:0044611 nuclear pore inner ring 1.08% (1/93) 6.53 0.010776 0.03507
GO:0008237 metallopeptidase activity 2.15% (2/93) 3.68 0.010932 0.035266
GO:0001046 core promoter sequence-specific DNA binding 1.08% (1/93) 6.43 0.011541 0.036913
GO:0016043 cellular component organization 7.53% (7/93) 1.51 0.011882 0.037359
GO:0031985 Golgi cisterna 1.08% (1/93) 6.39 0.011847 0.037567
GO:0042134 rRNA primary transcript binding 1.08% (1/93) 6.34 0.012306 0.038366
GO:0051179 localization 9.68% (9/93) 1.27 0.01276 0.03945
GO:0140513 nuclear protein-containing complex 5.38% (5/93) 1.85 0.012988 0.039824
GO:0044271 cellular nitrogen compound biosynthetic process 5.38% (5/93) 1.82 0.014018 0.042628
GO:0030041 actin filament polymerization 1.08% (1/93) 5.96 0.015969 0.047395
GO:0043171 peptide catabolic process 1.08% (1/93) 5.96 0.015969 0.047395
GO:0046474 glycerophospholipid biosynthetic process 2.15% (2/93) 3.39 0.01581 0.047686
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 2.15% (2/93) 3.35 0.016789 0.049434
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (93) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms