Coexpression cluster: Cluster_90 (Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 23.08% (24/104) 7.22 0.0 0.0
GO:0015979 photosynthesis 23.08% (24/104) 7.07 0.0 0.0
GO:0009522 photosystem I 13.46% (14/104) 8.29 0.0 0.0
GO:0098796 membrane protein complex 26.92% (28/104) 4.81 0.0 0.0
GO:0009765 photosynthesis, light harvesting 14.42% (15/104) 7.48 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 21.15% (22/104) 5.07 0.0 0.0
GO:0009538 photosystem I reaction center 8.65% (9/104) 8.42 0.0 0.0
GO:0005575 cellular_component 51.92% (54/104) 2.09 0.0 0.0
GO:0009523 photosystem II 9.62% (10/104) 6.5 0.0 0.0
GO:0032991 protein-containing complex 28.85% (30/104) 2.75 0.0 0.0
GO:0008152 metabolic process 59.62% (62/104) 1.46 0.0 0.0
GO:0044237 cellular metabolic process 49.04% (51/104) 1.69 0.0 0.0
GO:0009987 cellular process 56.73% (59/104) 1.26 0.0 0.0
GO:0009654 photosystem II oxygen evolving complex 6.73% (7/104) 6.52 0.0 0.0
GO:0016020 membrane 22.12% (23/104) 2.61 0.0 0.0
GO:0110165 cellular anatomical entity 32.69% (34/104) 1.91 0.0 0.0
GO:0008150 biological_process 67.31% (70/104) 0.86 0.0 0.0
GO:0010207 photosystem II assembly 3.85% (4/104) 7.76 0.0 0.0
GO:1990204 oxidoreductase complex 6.73% (7/104) 5.07 0.0 0.0
GO:0019898 extrinsic component of membrane 4.81% (5/104) 6.5 0.0 0.0
GO:0009055 electron transfer activity 6.73% (7/104) 4.2 0.0 2e-06
GO:0051537 2 iron, 2 sulfur cluster binding 4.81% (5/104) 5.34 0.0 2e-06
GO:0046034 ATP metabolic process 5.77% (6/104) 4.01 2e-06 3e-05
GO:0016491 oxidoreductase activity 16.35% (17/104) 1.91 2e-06 3.3e-05
GO:0009144 purine nucleoside triphosphate metabolic process 5.77% (6/104) 3.93 3e-06 3.7e-05
GO:0009205 purine ribonucleoside triphosphate metabolic process 5.77% (6/104) 3.93 3e-06 3.7e-05
GO:0006754 ATP biosynthetic process 3.85% (4/104) 5.25 4e-06 4.2e-05
GO:0015986 proton motive force-driven ATP synthesis 3.85% (4/104) 5.25 4e-06 4.2e-05
GO:0009199 ribonucleoside triphosphate metabolic process 5.77% (6/104) 3.87 4e-06 4.5e-05
GO:0022900 electron transport chain 4.81% (5/104) 4.43 4e-06 4.6e-05
GO:0009579 thylakoid 2.88% (3/104) 6.45 5e-06 5.3e-05
GO:0009141 nucleoside triphosphate metabolic process 5.77% (6/104) 3.76 6e-06 6e-05
GO:0042549 photosystem II stabilization 1.92% (2/104) 8.57 7e-06 6.3e-05
GO:0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity 1.92% (2/104) 8.57 7e-06 6.3e-05
GO:0010242 oxygen evolving activity 1.92% (2/104) 8.57 7e-06 6.3e-05
GO:0009512 cytochrome b6f complex 1.92% (2/104) 8.57 7e-06 6.3e-05
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.85% (4/104) 4.98 8e-06 7e-05
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.85% (4/104) 4.98 8e-06 7e-05
GO:1902494 catalytic complex 8.65% (9/104) 2.75 8e-06 7.1e-05
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.85% (4/104) 4.79 1.4e-05 0.000112
GO:0009142 nucleoside triphosphate biosynthetic process 3.85% (4/104) 4.79 1.4e-05 0.000112
GO:0010109 regulation of photosynthesis 1.92% (2/104) 7.98 2.1e-05 0.000147
GO:0042548 regulation of photosynthesis, light reaction 1.92% (2/104) 7.98 2.1e-05 0.000147
GO:0043467 regulation of generation of precursor metabolites and energy 1.92% (2/104) 7.98 2.1e-05 0.000147
GO:0051540 metal cluster binding 4.81% (5/104) 3.94 2e-05 0.000154
GO:0051536 iron-sulfur cluster binding 4.81% (5/104) 3.94 2e-05 0.000154
GO:0009150 purine ribonucleotide metabolic process 5.77% (6/104) 3.33 3.1e-05 0.000219
GO:0009259 ribonucleotide metabolic process 5.77% (6/104) 3.27 4e-05 0.000272
GO:0010206 photosystem II repair 1.92% (2/104) 7.57 4.1e-05 0.000276
GO:0019693 ribose phosphate metabolic process 5.77% (6/104) 3.25 4.3e-05 0.000281
GO:0005261 monoatomic cation channel activity 3.85% (4/104) 4.28 5.6e-05 0.000359
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 2.88% (3/104) 5.2 7.6e-05 0.000469
GO:0015252 proton channel activity 2.88% (3/104) 5.2 7.6e-05 0.000469
GO:0006163 purine nucleotide metabolic process 5.77% (6/104) 3.07 8.7e-05 0.000531
GO:0009152 purine ribonucleotide biosynthetic process 3.85% (4/104) 4.05 0.000106 0.000634
GO:0072521 purine-containing compound metabolic process 5.77% (6/104) 2.99 0.000115 0.000673
GO:0030091 protein repair 1.92% (2/104) 6.76 0.000143 0.000825
GO:0009260 ribonucleotide biosynthetic process 3.85% (4/104) 3.9 0.000158 0.000881
GO:0046390 ribose phosphate biosynthetic process 3.85% (4/104) 3.9 0.000158 0.000881
GO:0009117 nucleotide metabolic process 5.77% (6/104) 2.86 0.000187 0.001024
GO:0006753 nucleoside phosphate metabolic process 5.77% (6/104) 2.81 0.000225 0.001213
GO:0006164 purine nucleotide biosynthetic process 3.85% (4/104) 3.72 0.000251 0.001329
GO:0072522 purine-containing compound biosynthetic process 3.85% (4/104) 3.57 0.000377 0.001936
GO:0004332 fructose-bisphosphate aldolase activity 1.92% (2/104) 6.11 0.000372 0.001942
GO:0055086 nucleobase-containing small molecule metabolic process 5.77% (6/104) 2.6 0.000489 0.002473
GO:0015078 proton transmembrane transporter activity 3.85% (4/104) 3.44 0.000528 0.002633
GO:1901135 carbohydrate derivative metabolic process 5.77% (6/104) 2.57 0.000561 0.002753
GO:0016832 aldehyde-lyase activity 1.92% (2/104) 5.76 0.000612 0.002961
GO:0005216 monoatomic ion channel activity 3.85% (4/104) 3.31 0.000737 0.003513
GO:1901293 nucleoside phosphate biosynthetic process 3.85% (4/104) 3.29 0.000773 0.003584
GO:0009165 nucleotide biosynthetic process 3.85% (4/104) 3.29 0.000773 0.003584
GO:1901137 carbohydrate derivative biosynthetic process 3.85% (4/104) 3.07 0.001373 0.006273
GO:0070069 cytochrome complex 1.92% (2/104) 5.05 0.001676 0.00745
GO:0009767 photosynthetic electron transport chain 1.92% (2/104) 5.05 0.001676 0.00745
GO:0005509 calcium ion binding 4.81% (5/104) 2.49 0.002026 0.008887
GO:0065003 protein-containing complex assembly 3.85% (4/104) 2.88 0.0022 0.009523
GO:0015267 channel activity 3.85% (4/104) 2.85 0.002399 0.010119
GO:0022803 passive transmembrane transporter activity 3.85% (4/104) 2.85 0.002399 0.010119
GO:0009507 chloroplast 1.92% (2/104) 4.76 0.002482 0.010337
GO:0008324 monoatomic cation transmembrane transporter activity 4.81% (5/104) 2.4 0.002693 0.010675
GO:0009536 plastid 1.92% (2/104) 4.71 0.002661 0.010678
GO:0046148 pigment biosynthetic process 1.92% (2/104) 4.71 0.002661 0.010678
GO:0051741 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity 0.96% (1/104) 8.57 0.002633 0.010828
GO:0016830 carbon-carbon lyase activity 2.88% (3/104) 3.25 0.003984 0.015604
GO:0009909 regulation of flower development 1.92% (2/104) 4.4 0.00408 0.01561
GO:0048831 regulation of shoot system development 1.92% (2/104) 4.4 0.00408 0.01561
GO:0019637 organophosphate metabolic process 5.77% (6/104) 1.97 0.00452 0.017094
GO:0051592 response to calcium ion 0.96% (1/104) 7.57 0.005259 0.017132
GO:0071241 cellular response to inorganic substance 0.96% (1/104) 7.57 0.005259 0.017132
GO:0071277 cellular response to calcium ion 0.96% (1/104) 7.57 0.005259 0.017132
GO:0090333 regulation of stomatal closure 0.96% (1/104) 7.57 0.005259 0.017132
GO:0071248 cellular response to metal ion 0.96% (1/104) 7.57 0.005259 0.017132
GO:0009704 de-etiolation 0.96% (1/104) 7.57 0.005259 0.017132
GO:0019750 chloroplast localization 0.96% (1/104) 7.57 0.005259 0.017132
GO:0045550 geranylgeranyl reductase activity 0.96% (1/104) 7.57 0.005259 0.017132
GO:0051644 plastid localization 0.96% (1/104) 7.57 0.005259 0.017132
GO:0009902 chloroplast relocation 0.96% (1/104) 7.57 0.005259 0.017132
GO:1902075 cellular response to salt 0.96% (1/104) 7.57 0.005259 0.017132
GO:1901701 cellular response to oxygen-containing compound 0.96% (1/104) 7.57 0.005259 0.017132
GO:0051667 establishment of plastid localization 0.96% (1/104) 7.57 0.005259 0.017132
GO:0042440 pigment metabolic process 1.92% (2/104) 4.18 0.00552 0.017804
GO:0006006 glucose metabolic process 1.92% (2/104) 4.25 0.005018 0.018759
GO:0015075 monoatomic ion transmembrane transporter activity 4.81% (5/104) 2.13 0.005975 0.019085
GO:0022607 cellular component assembly 3.85% (4/104) 2.42 0.006858 0.021694
GO:0090407 organophosphate biosynthetic process 3.85% (4/104) 2.37 0.007726 0.024209
GO:2000241 regulation of reproductive process 1.92% (2/104) 3.9 0.008049 0.024749
GO:0009416 response to light stimulus 1.92% (2/104) 3.9 0.008049 0.024749
GO:0005975 carbohydrate metabolic process 6.73% (7/104) 1.61 0.008359 0.025231
GO:0009314 response to radiation 1.92% (2/104) 3.87 0.008357 0.025457
GO:0048580 regulation of post-embryonic development 1.92% (2/104) 3.84 0.00867 0.025697
GO:2000026 regulation of multicellular organismal development 1.92% (2/104) 3.84 0.00867 0.025697
GO:0044281 small molecule metabolic process 7.69% (8/104) 1.42 0.010549 0.028681
GO:0004560 alpha-L-fucosidase activity 0.96% (1/104) 6.57 0.010491 0.028763
GO:0015928 fucosidase activity 0.96% (1/104) 6.57 0.010491 0.028763
GO:0009642 response to light intensity 0.96% (1/104) 6.57 0.010491 0.028763
GO:0034765 regulation of monoatomic ion transmembrane transport 0.96% (1/104) 6.57 0.010491 0.028763
GO:0009644 response to high light intensity 0.96% (1/104) 6.57 0.010491 0.028763
GO:0051656 establishment of organelle localization 0.96% (1/104) 6.57 0.010491 0.028763
GO:0022890 inorganic cation transmembrane transporter activity 3.85% (4/104) 2.26 0.009992 0.029091
GO:0005507 copper ion binding 1.92% (2/104) 3.74 0.009973 0.029296
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.92% (2/104) 3.71 0.010312 0.029759
GO:0043933 protein-containing complex organization 3.85% (4/104) 2.19 0.011679 0.031496
GO:0043269 regulation of monoatomic ion transport 0.96% (1/104) 6.25 0.013097 0.034749
GO:0051640 organelle localization 0.96% (1/104) 6.25 0.013097 0.034749
GO:0051239 regulation of multicellular organismal process 1.92% (2/104) 3.48 0.013971 0.03677
GO:0019318 hexose metabolic process 1.92% (2/104) 3.46 0.014363 0.037504
GO:0050661 NADP binding 1.92% (2/104) 3.4 0.015569 0.040333
GO:0004097 catechol oxidase activity 0.96% (1/104) 5.98 0.015696 0.040343
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.92% (2/104) 3.32 0.017243 0.043975
GO:0004629 phospholipase C activity 0.96% (1/104) 5.76 0.018288 0.045929
GO:0004435 phosphatidylinositol phospholipase C activity 0.96% (1/104) 5.76 0.018288 0.045929
GO:0050793 regulation of developmental process 1.92% (2/104) 3.27 0.018545 0.046223
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (104) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms