Coexpression cluster: Cluster_63 (Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043232 intracellular non-membrane-bounded organelle 74.36% (58/78) 5.45 0.0 0.0
GO:0009059 macromolecule biosynthetic process 78.21% (61/78) 4.92 0.0 0.0
GO:0019538 protein metabolic process 78.21% (61/78) 3.05 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 79.49% (62/78) 3.45 0.0 0.0
GO:0043043 peptide biosynthetic process 78.21% (61/78) 5.73 0.0 0.0
GO:0043604 amide biosynthetic process 78.21% (61/78) 5.64 0.0 0.0
GO:0043226 organelle 74.36% (58/78) 4.33 0.0 0.0
GO:0043228 non-membrane-bounded organelle 74.36% (58/78) 5.45 0.0 0.0
GO:0043229 intracellular organelle 74.36% (58/78) 4.33 0.0 0.0
GO:0009058 biosynthetic process 78.21% (61/78) 3.86 0.0 0.0
GO:0044249 cellular biosynthetic process 78.21% (61/78) 4.06 0.0 0.0
GO:0003735 structural constituent of ribosome 78.21% (61/78) 5.73 0.0 0.0
GO:0005198 structural molecule activity 78.21% (61/78) 5.48 0.0 0.0
GO:1901576 organic substance biosynthetic process 78.21% (61/78) 3.94 0.0 0.0
GO:0005840 ribosome 73.08% (57/78) 5.75 0.0 0.0
GO:0006412 translation 78.21% (61/78) 5.77 0.0 0.0
GO:0006518 peptide metabolic process 78.21% (61/78) 5.65 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 78.21% (61/78) 4.83 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 78.21% (61/78) 4.67 0.0 0.0
GO:0043603 amide metabolic process 78.21% (61/78) 5.52 0.0 0.0
GO:0110165 cellular anatomical entity 75.64% (59/78) 3.12 0.0 0.0
GO:0005575 cellular_component 80.77% (63/78) 2.73 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 78.21% (61/78) 2.72 0.0 0.0
GO:0043170 macromolecule metabolic process 79.49% (62/78) 2.49 0.0 0.0
GO:0044237 cellular metabolic process 79.49% (62/78) 2.39 0.0 0.0
GO:0006807 nitrogen compound metabolic process 79.49% (62/78) 2.31 0.0 0.0
GO:0044238 primary metabolic process 79.49% (62/78) 2.06 0.0 0.0
GO:0071704 organic substance metabolic process 79.49% (62/78) 1.96 0.0 0.0
GO:0009987 cellular process 83.33% (65/78) 1.82 0.0 0.0
GO:0008152 metabolic process 79.49% (62/78) 1.87 0.0 0.0
GO:0044391 ribosomal subunit 17.95% (14/78) 5.93 0.0 0.0
GO:1990904 ribonucleoprotein complex 19.23% (15/78) 4.95 0.0 0.0
GO:0008150 biological_process 83.33% (65/78) 1.17 0.0 0.0
GO:0015935 small ribosomal subunit 10.26% (8/78) 6.59 0.0 0.0
GO:0003674 molecular_function 85.9% (67/78) 0.72 0.0 0.0
GO:0015934 large ribosomal subunit 7.69% (6/78) 5.36 0.0 0.0
GO:0003723 RNA binding 17.95% (14/78) 2.8 0.0 0.0
GO:0032991 protein-containing complex 20.51% (16/78) 2.26 0.0 0.0
GO:0042254 ribosome biogenesis 3.85% (3/78) 5.57 3.5e-05 7.7e-05
GO:0022613 ribonucleoprotein complex biogenesis 3.85% (3/78) 5.05 0.000106 0.000225
GO:0044085 cellular component biogenesis 3.85% (3/78) 3.8 0.001338 0.002774
GO:0019843 rRNA binding 2.56% (2/78) 4.81 0.002322 0.004699
GO:0006414 translational elongation 2.56% (2/78) 4.34 0.004435 0.008767
GO:0003676 nucleic acid binding 17.95% (14/78) 0.99 0.009875 0.019077
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.28% (1/78) 5.66 0.019575 0.036976
GO:0000470 maturation of LSU-rRNA 1.28% (1/78) 5.4 0.023445 0.043322
GO:0000387 spliceosomal snRNP assembly 1.28% (1/78) 5.28 0.025374 0.045889
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (78) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms