Coexpression cluster: Cluster_239 (Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006091 generation of precursor metabolites and energy 19.15% (9/47) 4.92 0.0 0.0
GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) 4.26% (2/47) 8.39 1.4e-05 0.002053
GO:0016744 transketolase or transaldolase activity 4.26% (2/47) 7.13 9.1e-05 0.004493
GO:0009773 photosynthetic electron transport in photosystem I 4.26% (2/47) 7.26 7.6e-05 0.004497
GO:0005977 glycogen metabolic process 4.26% (2/47) 6.71 0.000165 0.004887
GO:0005978 glycogen biosynthetic process 4.26% (2/47) 6.71 0.000165 0.004887
GO:0006112 energy reserve metabolic process 4.26% (2/47) 6.71 0.000165 0.004887
GO:0008152 metabolic process 46.81% (22/47) 1.11 0.000119 0.00504
GO:0005975 carbohydrate metabolic process 14.89% (7/47) 2.75 7.3e-05 0.005401
GO:0070566 adenylyltransferase activity 4.26% (2/47) 6.54 0.000209 0.005656
GO:0008878 glucose-1-phosphate adenylyltransferase activity 4.26% (2/47) 7.39 6.2e-05 0.006137
GO:0009767 photosynthetic electron transport chain 4.26% (2/47) 6.19 0.000345 0.008541
GO:0009536 plastid 4.26% (2/47) 5.86 0.000551 0.009095
GO:0019362 pyridine nucleotide metabolic process 6.38% (3/47) 4.26 0.000531 0.009281
GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water 4.26% (2/47) 6.07 0.000409 0.009334
GO:0009507 chloroplast 4.26% (2/47) 5.91 0.000514 0.009534
GO:0003824 catalytic activity 51.06% (24/47) 0.9 0.000464 0.009837
GO:0072524 pyridine-containing compound metabolic process 6.38% (3/47) 4.16 0.000644 0.01006
GO:0046496 nicotinamide nucleotide metabolic process 6.38% (3/47) 4.28 0.000508 0.010061
GO:0015980 energy derivation by oxidation of organic compounds 4.26% (2/47) 5.43 0.000998 0.014828
GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses 4.26% (2/47) 5.39 0.00105 0.014853
GO:1901135 carbohydrate derivative metabolic process 8.51% (4/47) 3.13 0.001139 0.015372
GO:0009704 de-etiolation 2.13% (1/47) 8.71 0.002378 0.022075
GO:0004802 transketolase activity 2.13% (1/47) 8.71 0.002378 0.022075
GO:0051592 response to calcium ion 2.13% (1/47) 8.71 0.002378 0.022075
GO:0071241 cellular response to inorganic substance 2.13% (1/47) 8.71 0.002378 0.022075
GO:0071248 cellular response to metal ion 2.13% (1/47) 8.71 0.002378 0.022075
GO:0071277 cellular response to calcium ion 2.13% (1/47) 8.71 0.002378 0.022075
GO:0090333 regulation of stomatal closure 2.13% (1/47) 8.71 0.002378 0.022075
GO:1902075 cellular response to salt 2.13% (1/47) 8.71 0.002378 0.022075
GO:1901701 cellular response to oxygen-containing compound 2.13% (1/47) 8.71 0.002378 0.022075
GO:0009185 ribonucleoside diphosphate metabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0006096 glycolytic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0006195 purine nucleotide catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0046031 ADP metabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009191 ribonucleoside diphosphate catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009137 purine nucleoside diphosphate catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009261 ribonucleotide catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0046032 ADP catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0019364 pyridine nucleotide catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009181 purine ribonucleoside diphosphate catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009179 purine ribonucleoside diphosphate metabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009135 purine nucleoside diphosphate metabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0072526 pyridine-containing compound catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009154 purine ribonucleotide catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0072523 purine-containing compound catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009134 nucleoside diphosphate catabolic process 4.26% (2/47) 4.16 0.00565 0.024677
GO:0009166 nucleotide catabolic process 4.26% (2/47) 4.13 0.005885 0.025333
GO:0009117 nucleotide metabolic process 6.38% (3/47) 3.01 0.006177 0.02584
GO:0009132 nucleoside diphosphate metabolic process 4.26% (2/47) 4.1 0.006125 0.025988
GO:0019693 ribose phosphate metabolic process 6.38% (3/47) 3.4 0.002915 0.026235
GO:0044237 cellular metabolic process 31.91% (15/47) 1.07 0.00302 0.026378
GO:0009052 pentose-phosphate shunt, non-oxidative branch 2.13% (1/47) 8.13 0.003566 0.026475
GO:0008974 phosphoribulokinase activity 2.13% (1/47) 8.13 0.003566 0.026475
GO:0016630 protochlorophyllide reductase activity 2.13% (1/47) 8.13 0.003566 0.026475
GO:0004750 D-ribulose-phosphate 3-epimerase activity 2.13% (1/47) 8.13 0.003566 0.026475
GO:0004751 ribose-5-phosphate isomerase activity 2.13% (1/47) 8.13 0.003566 0.026475
GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity 2.13% (1/47) 8.13 0.003566 0.026475
GO:0016860 intramolecular oxidoreductase activity 4.26% (2/47) 4.88 0.002121 0.027395
GO:0032787 monocarboxylic acid metabolic process 6.38% (3/47) 3.26 0.003853 0.02791
GO:0000271 polysaccharide biosynthetic process 4.26% (2/47) 4.01 0.006871 0.027955
GO:0006753 nucleoside phosphate metabolic process 6.38% (3/47) 2.96 0.006792 0.028016
GO:0004618 phosphoglycerate kinase activity 2.13% (1/47) 7.13 0.007119 0.028572
GO:1901292 nucleoside phosphate catabolic process 4.26% (2/47) 3.97 0.007259 0.028745
GO:0009250 glucan biosynthetic process 4.26% (2/47) 4.24 0.005081 0.029589
GO:0006163 purine nucleotide metabolic process 6.38% (3/47) 3.21 0.004188 0.029612
GO:0072521 purine-containing compound metabolic process 6.38% (3/47) 3.14 0.004815 0.02979
GO:0019682 glyceraldehyde-3-phosphate metabolic process 2.13% (1/47) 7.71 0.004751 0.030025
GO:0016851 magnesium chelatase activity 2.13% (1/47) 7.71 0.004751 0.030025
GO:0051002 ligase activity, forming nitrogen-metal bonds 2.13% (1/47) 7.71 0.004751 0.030025
GO:0010206 photosystem II repair 2.13% (1/47) 7.71 0.004751 0.030025
GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes 2.13% (1/47) 7.71 0.004751 0.030025
GO:0022900 electron transport chain 4.26% (2/47) 4.26 0.004971 0.030127
GO:0019637 organophosphate metabolic process 8.51% (4/47) 2.53 0.005073 0.030132
GO:0051287 NAD binding 4.26% (2/47) 3.92 0.007791 0.030446
GO:0046434 organophosphate catabolic process 4.26% (2/47) 3.91 0.007926 0.030573
GO:0006090 pyruvate metabolic process 4.26% (2/47) 3.87 0.00834 0.030579
GO:0004311 farnesyltranstransferase activity 2.13% (1/47) 6.91 0.0083 0.030816
GO:0030091 protein repair 2.13% (1/47) 6.91 0.0083 0.030816
GO:0008150 biological_process 55.32% (26/47) 0.58 0.008253 0.031425
GO:0016853 isomerase activity 6.38% (3/47) 3.06 0.005649 0.032262
GO:0010119 regulation of stomatal movement 2.13% (1/47) 6.71 0.009481 0.032742
GO:0044620 ACP phosphopantetheine attachment site binding 2.13% (1/47) 6.71 0.009481 0.032742
GO:0051192 prosthetic group binding 2.13% (1/47) 6.71 0.009481 0.032742
GO:0000036 acyl carrier activity 2.13% (1/47) 6.71 0.009481 0.032742
GO:0140414 phosphopantetheine-dependent carrier activity 2.13% (1/47) 6.71 0.009481 0.032742
GO:0044042 glucan metabolic process 4.26% (2/47) 3.76 0.009637 0.032899
GO:1901136 carbohydrate derivative catabolic process 4.26% (2/47) 3.74 0.009937 0.033536
GO:0055086 nucleobase-containing small molecule metabolic process 6.38% (3/47) 2.75 0.01011 0.033736
GO:0016052 carbohydrate catabolic process 4.26% (2/47) 3.68 0.010704 0.035323
GO:0006629 lipid metabolic process 8.51% (4/47) 2.18 0.011633 0.037969
GO:0046034 ATP metabolic process 4.26% (2/47) 3.58 0.012314 0.039753
GO:0010038 response to metal ion 2.13% (1/47) 6.26 0.013013 0.041117
GO:0015995 chlorophyll biosynthetic process 2.13% (1/47) 6.26 0.013013 0.041117
GO:0006098 pentose-phosphate shunt 2.13% (1/47) 6.01 0.015362 0.041856
GO:0006740 NADPH regeneration 2.13% (1/47) 6.01 0.015362 0.041856
GO:0046481 digalactosyldiacylglycerol synthase activity 2.13% (1/47) 6.01 0.015362 0.041856
GO:0035250 UDP-galactosyltransferase activity 2.13% (1/47) 6.01 0.015362 0.041856
GO:0051156 glucose 6-phosphate metabolic process 2.13% (1/47) 6.01 0.015362 0.041856
GO:0008378 galactosyltransferase activity 2.13% (1/47) 6.01 0.015362 0.041856
GO:0004470 malic enzyme activity 2.13% (1/47) 6.01 0.015362 0.041856
GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity 2.13% (1/47) 6.01 0.015362 0.041856
GO:0009579 thylakoid 2.13% (1/47) 6.01 0.015362 0.041856
GO:0009144 purine nucleoside triphosphate metabolic process 4.26% (2/47) 3.5 0.013674 0.042304
GO:0009205 purine ribonucleoside triphosphate metabolic process 4.26% (2/47) 3.5 0.013674 0.042304
GO:0004017 adenylate kinase activity 2.13% (1/47) 6.13 0.014188 0.042999
GO:0004807 triose-phosphate isomerase activity 2.13% (1/47) 6.13 0.014188 0.042999
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 4.26% (2/47) 3.45 0.014556 0.043667
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 2.13% (1/47) 5.91 0.016533 0.044238
GO:0015994 chlorophyll metabolic process 2.13% (1/47) 5.91 0.016533 0.044238
GO:0009199 ribonucleoside triphosphate metabolic process 4.26% (2/47) 3.43 0.014915 0.044297
GO:0005976 polysaccharide metabolic process 4.26% (2/47) 3.33 0.016959 0.044972
GO:0009141 nucleoside triphosphate metabolic process 4.26% (2/47) 3.32 0.017151 0.045077
GO:0034655 nucleobase-containing compound catabolic process 4.26% (2/47) 3.31 0.017343 0.045183
GO:0016051 carbohydrate biosynthetic process 4.26% (2/47) 3.31 0.017536 0.04529
GO:0009987 cellular process 38.3% (18/47) 0.69 0.017818 0.045621
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 4.26% (2/47) 3.25 0.018915 0.048016
GO:0044270 cellular nitrogen compound catabolic process 4.26% (2/47) 3.23 0.019317 0.048621
GO:0046700 heterocycle catabolic process 4.26% (2/47) 3.22 0.01952 0.048717
GO:0009522 photosystem I 2.13% (1/47) 5.63 0.020042 0.049603
GO:0071704 organic substance metabolic process 34.04% (16/47) 0.74 0.020312 0.049856
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (47) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms