Coexpression cluster: Cluster_301 (Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090304 nucleic acid metabolic process 17.54% (10/57) 2.0 0.000166 0.004368
GO:0043170 macromolecule metabolic process 33.33% (19/57) 1.24 0.000198 0.004427
GO:0000387 spliceosomal snRNP assembly 3.51% (2/57) 6.74 0.000158 0.004581
GO:0140513 nuclear protein-containing complex 8.77% (5/57) 3.23 0.000192 0.004645
GO:0044238 primary metabolic process 40.35% (23/57) 1.09 0.000157 0.005053
GO:0000105 histidine biosynthetic process 3.51% (2/57) 6.85 0.000134 0.005543
GO:0006547 histidine metabolic process 3.51% (2/57) 6.85 0.000134 0.005543
GO:0008152 metabolic process 43.86% (25/57) 1.01 0.000155 0.005624
GO:0003905 alkylbase DNA N-glycosylase activity 3.51% (2/57) 6.98 0.000112 0.006473
GO:0042277 peptide binding 3.51% (2/57) 6.19 0.000344 0.006658
GO:0005048 signal sequence binding 3.51% (2/57) 6.19 0.000344 0.006658
GO:0019104 DNA N-glycosylase activity 3.51% (2/57) 6.11 0.000382 0.006929
GO:0071704 organic substance metabolic process 40.35% (23/57) 0.98 0.000454 0.007317
GO:1990904 ribonucleoprotein complex 7.02% (4/57) 3.5 0.000441 0.00752
GO:0006807 nitrogen compound metabolic process 36.84% (21/57) 1.2 0.000109 0.007892
GO:0006284 base-excision repair 3.51% (2/57) 5.85 0.000553 0.008445
GO:0006396 RNA processing 8.77% (5/57) 2.88 0.000599 0.008688
GO:0008725 DNA-3-methyladenine glycosylase activity 3.51% (2/57) 7.11 9.1e-05 0.008835
GO:0043733 DNA-3-methylbase glycosylase activity 3.51% (2/57) 7.11 9.1e-05 0.008835
GO:0006139 nucleobase-containing compound metabolic process 17.54% (10/57) 1.7 0.000891 0.012303
GO:0033218 amide binding 3.51% (2/57) 5.39 0.00105 0.013837
GO:0044237 cellular metabolic process 36.84% (21/57) 1.28 4.9e-05 0.014215
GO:0007275 multicellular organism development 3.51% (2/57) 5.08 0.001618 0.015643
GO:0046483 heterocycle metabolic process 17.54% (10/57) 1.57 0.001675 0.015673
GO:0009987 cellular process 42.11% (24/57) 0.83 0.001595 0.015954
GO:0005681 spliceosomal complex 3.51% (2/57) 5.11 0.001541 0.015957
GO:0071826 protein-RNA complex organization 3.51% (2/57) 5.11 0.001541 0.015957
GO:0016763 pentosyltransferase activity 3.51% (2/57) 5.11 0.001541 0.015957
GO:0006725 cellular aromatic compound metabolic process 17.54% (10/57) 1.56 0.001814 0.016436
GO:0051723 protein methylesterase activity 1.75% (1/57) 9.44 0.001443 0.01674
GO:0022618 protein-RNA complex assembly 3.51% (2/57) 5.19 0.001391 0.01681
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 3.51% (2/57) 5.19 0.001391 0.01681
GO:0005488 binding 50.88% (29/57) 0.68 0.001947 0.017111
GO:1901360 organic cyclic compound metabolic process 17.54% (10/57) 1.53 0.002086 0.01779
GO:0006605 protein targeting 3.51% (2/57) 4.79 0.002397 0.019864
GO:0006259 DNA metabolic process 8.77% (5/57) 2.24 0.004104 0.033056
GO:0003674 molecular_function 70.18% (40/57) 0.43 0.004386 0.034373
GO:0008150 biological_process 54.39% (31/57) 0.55 0.00577 0.042904
GO:0008139 nuclear localization sequence binding 1.75% (1/57) 7.44 0.00576 0.043959
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (57) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms