Coexpression cluster: Cluster_121 (Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046654 tetrahydrofolate biosynthetic process 2.7% (2/74) 7.48 5.2e-05 0.00104
GO:0019441 tryptophan catabolic process to kynurenine 2.7% (2/74) 7.48 5.2e-05 0.00104
GO:0006569 tryptophan catabolic process 2.7% (2/74) 7.48 5.2e-05 0.00104
GO:0070189 kynurenine metabolic process 2.7% (2/74) 7.48 5.2e-05 0.00104
GO:0042537 benzene-containing compound metabolic process 2.7% (2/74) 7.48 5.2e-05 0.00104
GO:0042436 indole-containing compound catabolic process 2.7% (2/74) 7.48 5.2e-05 0.00104
GO:0016054 organic acid catabolic process 4.05% (3/74) 5.12 9e-05 0.001533
GO:0046395 carboxylic acid catabolic process 4.05% (3/74) 5.12 9e-05 0.001533
GO:0032993 protein-DNA complex 5.41% (4/74) 4.33 4.9e-05 0.001571
GO:0000786 nucleosome 5.41% (4/74) 4.36 4.5e-05 0.00162
GO:0016209 antioxidant activity 6.76% (5/74) 3.48 8.9e-05 0.001689
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 6.76% (5/74) 3.7 4.3e-05 0.001739
GO:0004601 peroxidase activity 6.76% (5/74) 3.7 4.3e-05 0.001739
GO:0006979 response to oxidative stress 6.76% (5/74) 3.77 3.4e-05 0.001827
GO:0009063 amino acid catabolic process 4.05% (3/74) 5.64 3e-05 0.001939
GO:0042743 hydrogen peroxide metabolic process 5.41% (4/74) 3.97 0.000128 0.001968
GO:0042744 hydrogen peroxide catabolic process 5.41% (4/74) 3.97 0.000128 0.001968
GO:1901606 alpha-amino acid catabolic process 4.05% (3/74) 5.69 2.7e-05 0.0022
GO:0046982 protein heterodimerization activity 5.41% (4/74) 3.88 0.000164 0.002203
GO:0004061 arylformamidase activity 2.7% (2/74) 8.06 2.1e-05 0.002225
GO:0004146 dihydrofolate reductase activity 2.7% (2/74) 8.06 2.1e-05 0.002225
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 2.7% (2/74) 6.74 0.000154 0.002259
GO:0046983 protein dimerization activity 9.46% (7/74) 2.59 0.000163 0.00228
GO:0072593 reactive oxygen species metabolic process 5.41% (4/74) 3.78 0.000212 0.00273
GO:0046653 tetrahydrofolate metabolic process 2.7% (2/74) 6.48 0.000226 0.002796
GO:0044282 small molecule catabolic process 4.05% (3/74) 4.64 0.000242 0.002889
GO:1901575 organic substance catabolic process 9.46% (7/74) 2.46 0.000281 0.003227
GO:0009396 folic acid-containing compound biosynthetic process 2.7% (2/74) 6.25 0.000311 0.003448
GO:0042559 pteridine-containing compound biosynthetic process 2.7% (2/74) 6.06 0.000409 0.004243
GO:1901605 alpha-amino acid metabolic process 5.41% (4/74) 3.52 0.000424 0.004262
GO:0009056 catabolic process 9.46% (7/74) 2.38 0.000399 0.004286
GO:0009074 aromatic amino acid family catabolic process 2.7% (2/74) 5.97 0.000462 0.004512
GO:0044248 cellular catabolic process 9.46% (7/74) 3.14 1.5e-05 0.004805
GO:0003743 translation initiation factor activity 4.05% (3/74) 4.27 0.000521 0.004932
GO:0020037 heme binding 8.11% (6/74) 2.56 0.000557 0.004983
GO:0016741 transferase activity, transferring one-carbon groups 6.76% (5/74) 2.91 0.000553 0.005085
GO:0046906 tetrapyrrole binding 8.11% (6/74) 2.54 0.000584 0.005086
GO:0006520 amino acid metabolic process 6.76% (5/74) 2.79 0.000796 0.006571
GO:0006760 folic acid-containing compound metabolic process 2.7% (2/74) 5.6 0.000781 0.006615
GO:0042558 pteridine-containing compound metabolic process 2.7% (2/74) 5.48 0.000931 0.007491
GO:0042180 cellular ketone metabolic process 2.7% (2/74) 5.36 0.001093 0.008585
GO:0006568 tryptophan metabolic process 2.7% (2/74) 5.31 0.001179 0.008629
GO:0042430 indole-containing compound metabolic process 2.7% (2/74) 5.31 0.001179 0.008629
GO:0006586 indolalkylamine metabolic process 2.7% (2/74) 5.31 0.001179 0.008629
GO:0140359 ABC-type transporter activity 4.05% (3/74) 3.84 0.001243 0.008892
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 2.7% (2/74) 5.2 0.001361 0.009524
GO:0042398 cellular modified amino acid biosynthetic process 2.7% (2/74) 5.15 0.001456 0.009975
GO:0010411 xyloglucan metabolic process 2.7% (2/74) 5.11 0.001554 0.010428
GO:0006073 obsolete cellular glucan metabolic process 2.7% (2/74) 5.06 0.001656 0.010456
GO:0016762 xyloglucan:xyloglucosyl transferase activity 2.7% (2/74) 5.06 0.001656 0.010456
GO:0005618 cell wall 2.7% (2/74) 5.06 0.001656 0.010456
GO:0030312 external encapsulating structure 2.7% (2/74) 4.93 0.001979 0.012257
GO:0009987 cellular process 39.19% (29/74) 0.73 0.002114 0.012842
GO:0022857 transmembrane transporter activity 10.81% (8/74) 1.79 0.002191 0.013066
GO:0090079 translation regulator activity, nucleic acid binding 4.05% (3/74) 3.51 0.002399 0.013791
GO:0008135 translation factor activity, RNA binding 4.05% (3/74) 3.51 0.002399 0.013791
GO:0006575 cellular modified amino acid metabolic process 2.7% (2/74) 4.77 0.002453 0.013859
GO:0005215 transporter activity 10.81% (8/74) 1.74 0.002678 0.014868
GO:0045182 translation regulator activity 4.05% (3/74) 3.44 0.002751 0.015013
GO:0008171 O-methyltransferase activity 2.7% (2/74) 4.6 0.003113 0.016707
GO:0071554 cell wall organization or biogenesis 4.05% (3/74) 3.34 0.003307 0.017455
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 2.7% (2/74) 4.54 0.003398 0.017646
GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity 1.35% (1/74) 8.06 0.003744 0.017991
GO:0006481 C-terminal protein methylation 1.35% (1/74) 8.06 0.003744 0.017991
GO:0003880 protein C-terminal carboxyl O-methyltransferase activity 1.35% (1/74) 8.06 0.003744 0.017991
GO:0018410 C-terminal protein amino acid modification 1.35% (1/74) 8.06 0.003744 0.017991
GO:0048046 apoplast 2.7% (2/74) 4.51 0.003544 0.018116
GO:0006576 biogenic amine metabolic process 2.7% (2/74) 4.33 0.004486 0.021241
GO:0010410 hemicellulose metabolic process 2.7% (2/74) 4.28 0.004822 0.022182
GO:0010383 cell wall polysaccharide metabolic process 2.7% (2/74) 4.28 0.004822 0.022182
GO:0016740 transferase activity 21.62% (16/74) 1.0 0.005094 0.023103
GO:1901564 organonitrogen compound metabolic process 22.97% (17/74) 0.96 0.005189 0.023208
GO:0005576 extracellular region 4.05% (3/74) 3.08 0.005528 0.024384
GO:0042626 ATPase-coupled transmembrane transporter activity 4.05% (3/74) 3.02 0.006108 0.026579
GO:0042546 cell wall biogenesis 2.7% (2/74) 4.08 0.006281 0.026612
GO:0015144 carbohydrate transmembrane transporter activity 2.7% (2/74) 4.08 0.006281 0.026612
GO:0010340 carboxyl-O-methyltransferase activity 1.35% (1/74) 7.06 0.007473 0.030851
GO:0051998 protein carboxyl O-methyltransferase activity 1.35% (1/74) 7.06 0.007473 0.030851
GO:0030145 manganese ion binding 2.7% (2/74) 3.89 0.008132 0.033144
GO:0004714 transmembrane receptor protein tyrosine kinase activity 2.7% (2/74) 3.85 0.008572 0.034503
GO:0044036 cell wall macromolecule metabolic process 2.7% (2/74) 3.83 0.008797 0.034969
GO:1901475 pyruvate transmembrane transport 1.35% (1/74) 6.74 0.009333 0.035356
GO:0006848 pyruvate transport 1.35% (1/74) 6.74 0.009333 0.035356
GO:0006850 mitochondrial pyruvate transmembrane transport 1.35% (1/74) 6.74 0.009333 0.035356
GO:0006082 organic acid metabolic process 6.76% (5/74) 1.94 0.009999 0.035381
GO:0009072 aromatic amino acid metabolic process 2.7% (2/74) 3.74 0.009957 0.035623
GO:0043436 oxoacid metabolic process 6.76% (5/74) 1.94 0.009941 0.035967
GO:1901565 organonitrogen compound catabolic process 4.05% (3/74) 2.77 0.00977 0.036159
GO:0019752 carboxylic acid metabolic process 6.76% (5/74) 1.94 0.009884 0.036167
GO:0009308 amine metabolic process 2.7% (2/74) 3.79 0.009253 0.036334
GO:0019199 transmembrane receptor protein kinase activity 2.7% (2/74) 3.76 0.00972 0.036392
GO:0004888 transmembrane signaling receptor activity 2.7% (2/74) 3.7 0.010439 0.036536
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 2.7% (2/74) 3.69 0.010684 0.036991
GO:0006542 glutamine biosynthetic process 1.35% (1/74) 6.48 0.011189 0.038329
GO:0015399 primary active transmembrane transporter activity 4.05% (3/74) 2.69 0.011549 0.039144
GO:0019464 glycine decarboxylation via glycine cleavage system 1.35% (1/74) 6.25 0.013042 0.04158
GO:1905039 carboxylic acid transmembrane transport 1.35% (1/74) 6.25 0.013042 0.04158
GO:1903825 organic acid transmembrane transport 1.35% (1/74) 6.25 0.013042 0.04158
GO:0005960 glycine cleavage complex 1.35% (1/74) 6.25 0.013042 0.04158
GO:0055085 transmembrane transport 8.11% (6/74) 1.64 0.012616 0.042315
GO:0044237 cellular metabolic process 25.68% (19/74) 0.76 0.012779 0.042421
GO:0004713 protein tyrosine kinase activity 2.7% (2/74) 3.51 0.013543 0.042753
GO:0006541 glutamine metabolic process 1.35% (1/74) 6.06 0.014892 0.046106
GO:0016491 oxidoreductase activity 10.81% (8/74) 1.32 0.014758 0.046137
GO:0038023 signaling receptor activity 2.7% (2/74) 3.4 0.015516 0.047581
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (74) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms