Coexpression cluster: Cluster_61 (Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 68.86% (199/289) 0.4 0.0 4e-06
GO:0005215 transporter activity 10.03% (29/289) 1.63 0.0 3.4e-05
GO:0022857 transmembrane transporter activity 9.69% (28/289) 1.63 0.0 4e-05
GO:0043167 ion binding 24.57% (71/289) 0.83 1e-06 0.000128
GO:0006810 transport 11.76% (34/289) 1.31 1e-06 0.000171
GO:0051234 establishment of localization 11.76% (34/289) 1.28 2e-06 0.000246
GO:0051179 localization 11.76% (34/289) 1.26 2e-06 0.000271
GO:0055085 transmembrane transport 7.61% (22/289) 1.55 8e-06 0.00081
GO:0000166 nucleotide binding 16.96% (49/289) 0.91 1.2e-05 0.00094
GO:1901265 nucleoside phosphate binding 16.96% (49/289) 0.91 1.2e-05 0.00094
GO:0043168 anion binding 16.96% (49/289) 0.9 1.5e-05 0.001067
GO:0036094 small molecule binding 17.3% (50/289) 0.87 2.3e-05 0.001109
GO:0006650 glycerophospholipid metabolic process 2.77% (8/289) 2.73 3.2e-05 0.00112
GO:0032553 ribonucleotide binding 15.57% (45/289) 0.93 2.2e-05 0.001158
GO:1901363 heterocyclic compound binding 17.3% (50/289) 0.88 1.8e-05 0.001163
GO:0048511 rhythmic process 1.04% (3/289) 5.51 3.2e-05 0.001166
GO:0007623 circadian rhythm 1.04% (3/289) 5.51 3.2e-05 0.001166
GO:0046524 sucrose-phosphate synthase activity 1.04% (3/289) 5.51 3.2e-05 0.001166
GO:0052742 phosphatidylinositol kinase activity 1.38% (4/289) 4.57 2.2e-05 0.001236
GO:0097367 carbohydrate derivative binding 15.57% (45/289) 0.92 2.7e-05 0.001242
GO:0046486 glycerolipid metabolic process 2.77% (8/289) 2.69 3.8e-05 0.001271
GO:0005488 binding 43.25% (125/289) 0.45 2.1e-05 0.001276
GO:0019637 organophosphate metabolic process 5.19% (15/289) 1.81 3.1e-05 0.001327
GO:0006796 phosphate-containing compound metabolic process 11.76% (34/289) 1.07 4.1e-05 0.001338
GO:0009881 photoreceptor activity 1.04% (3/289) 5.36 4.5e-05 0.001338
GO:0006793 phosphorus metabolic process 11.76% (34/289) 1.06 4.4e-05 0.001367
GO:0048017 obsolete inositol lipid-mediated signaling 0.69% (2/289) 7.09 5.3e-05 0.001429
GO:0046473 phosphatidic acid metabolic process 0.69% (2/289) 7.09 5.3e-05 0.001429
GO:0006654 phosphatidic acid biosynthetic process 0.69% (2/289) 7.09 5.3e-05 0.001429
GO:0030554 adenyl nucleotide binding 14.53% (42/289) 0.91 5.8e-05 0.001509
GO:0017076 purine nucleotide binding 15.57% (45/289) 0.87 6.5e-05 0.001626
GO:0032559 adenyl ribonucleotide binding 13.84% (40/289) 0.92 7.3e-05 0.001776
GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity 1.04% (3/289) 5.09 8.1e-05 0.001803
GO:0005986 sucrose biosynthetic process 1.04% (3/289) 5.09 8.1e-05 0.001803
GO:0032555 purine ribonucleotide binding 14.88% (43/289) 0.88 7.9e-05 0.001865
GO:0001727 lipid kinase activity 1.38% (4/289) 4.05 9.7e-05 0.002097
GO:0005524 ATP binding 13.15% (38/289) 0.92 0.00012 0.002512
GO:0035639 purine ribonucleoside triphosphate binding 14.19% (41/289) 0.87 0.000129 0.002577
GO:0008150 biological_process 47.75% (138/289) 0.36 0.000128 0.002624
GO:0022804 active transmembrane transporter activity 3.81% (11/289) 1.97 0.000136 0.002651
GO:0004475 mannose-1-phosphate guanylyltransferase (GTP) activity 0.69% (2/289) 6.51 0.000159 0.003019
GO:0008643 carbohydrate transport 1.38% (4/289) 3.85 0.00017 0.003151
GO:0140359 ABC-type transporter activity 2.08% (6/289) 2.87 0.000182 0.00329
GO:0006644 phospholipid metabolic process 2.77% (8/289) 2.33 0.000214 0.003774
GO:0015930 glutamate synthase activity 0.69% (2/289) 6.09 0.000317 0.005241
GO:0009882 blue light photoreceptor activity 0.69% (2/289) 6.09 0.000317 0.005241
GO:0006537 glutamate biosynthetic process 0.69% (2/289) 6.09 0.000317 0.005241
GO:0046488 phosphatidylinositol metabolic process 2.08% (6/289) 2.69 0.000359 0.005814
GO:0046873 metal ion transmembrane transporter activity 2.42% (7/289) 2.38 0.000438 0.006948
GO:0009416 response to light stimulus 1.38% (4/289) 3.42 0.000535 0.007846
GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor 0.69% (2/289) 5.77 0.000526 0.007857
GO:0016773 phosphotransferase activity, alcohol group as acceptor 9.0% (26/289) 1.03 0.000521 0.00793
GO:0030001 metal ion transport 2.42% (7/289) 2.34 0.000514 0.00799
GO:0009314 response to radiation 1.38% (4/289) 3.39 0.000576 0.008295
GO:0006811 monoatomic ion transport 3.46% (10/289) 1.81 0.000661 0.009167
GO:0042626 ATPase-coupled transmembrane transporter activity 2.42% (7/289) 2.28 0.000657 0.009284
GO:0016157 sucrose synthase activity 1.04% (3/289) 4.04 0.000791 0.010601
GO:0043650 dicarboxylic acid biosynthetic process 0.69% (2/289) 5.51 0.000785 0.010699
GO:0072525 pyridine-containing compound biosynthetic process 1.04% (3/289) 3.98 0.00089 0.011717
GO:0016772 transferase activity, transferring phosphorus-containing groups 10.03% (29/289) 0.91 0.000929 0.012032
GO:0016301 kinase activity 9.0% (26/289) 0.96 0.000974 0.012408
GO:0071483 cellular response to blue light 0.69% (2/289) 5.29 0.001094 0.013072
GO:0015293 symporter activity 0.69% (2/289) 5.29 0.001094 0.013072
GO:0009785 blue light signaling pathway 0.69% (2/289) 5.29 0.001094 0.013072
GO:0030522 intracellular receptor signaling pathway 0.69% (2/289) 5.29 0.001094 0.013072
GO:0003779 actin binding 1.73% (5/289) 2.68 0.001172 0.013802
GO:0006629 lipid metabolic process 4.84% (14/289) 1.37 0.001264 0.014657
GO:0097468 programmed cell death in response to reactive oxygen species 0.69% (2/289) 5.09 0.001451 0.01588
GO:0010343 singlet oxygen-mediated programmed cell death 0.69% (2/289) 5.09 0.001451 0.01588
GO:0070568 guanylyltransferase activity 0.69% (2/289) 5.09 0.001451 0.01588
GO:0005985 sucrose metabolic process 1.04% (3/289) 3.73 0.001497 0.015937
GO:0016307 obsolete phosphatidylinositol phosphate kinase activity 1.04% (3/289) 3.73 0.001497 0.015937
GO:0008324 monoatomic cation transmembrane transporter activity 3.11% (9/289) 1.77 0.001448 0.016541
GO:0071214 cellular response to abiotic stimulus 0.69% (2/289) 4.92 0.001857 0.017809
GO:0009298 GDP-mannose biosynthetic process 0.69% (2/289) 4.92 0.001857 0.017809
GO:0071478 cellular response to radiation 0.69% (2/289) 4.92 0.001857 0.017809
GO:0071482 cellular response to light stimulus 0.69% (2/289) 4.92 0.001857 0.017809
GO:0006536 glutamate metabolic process 0.69% (2/289) 4.92 0.001857 0.017809
GO:0104004 cellular response to environmental stimulus 0.69% (2/289) 4.92 0.001857 0.017809
GO:0003824 catalytic activity 35.29% (102/289) 0.37 0.001733 0.018194
GO:0016740 transferase activity 16.61% (48/289) 0.62 0.001779 0.018426
GO:0007015 actin filament organization 1.38% (4/289) 2.9 0.002056 0.019479
GO:0022890 inorganic cation transmembrane transporter activity 2.77% (8/289) 1.79 0.002478 0.023193
GO:0015399 primary active transmembrane transporter activity 2.42% (7/289) 1.94 0.002517 0.023285
GO:0009637 response to blue light 0.69% (2/289) 4.64 0.002809 0.023725
GO:0019673 GDP-mannose metabolic process 0.69% (2/289) 4.64 0.002809 0.023725
GO:0034593 phosphatidylinositol bisphosphate phosphatase activity 0.69% (2/289) 4.64 0.002809 0.023725
GO:0106018 phosphatidylinositol-3,5-bisphosphate phosphatase activity 0.69% (2/289) 4.64 0.002809 0.023725
GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity 0.69% (2/289) 4.64 0.002809 0.023725
GO:0043813 phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity 0.69% (2/289) 4.64 0.002809 0.023725
GO:0052866 phosphatidylinositol phosphate phosphatase activity 0.69% (2/289) 4.64 0.002809 0.023725
GO:0016887 ATP hydrolysis activity 3.11% (9/289) 1.64 0.002659 0.024302
GO:0006812 monoatomic cation transport 2.77% (8/289) 1.74 0.00305 0.025478
GO:0015318 inorganic molecular entity transmembrane transporter activity 3.11% (9/289) 1.61 0.003086 0.025506
GO:0061919 process utilizing autophagic mechanism 1.04% (3/289) 3.32 0.003365 0.027233
GO:0006914 autophagy 1.04% (3/289) 3.32 0.003365 0.027233
GO:0016567 protein ubiquitination 2.08% (6/289) 2.06 0.003421 0.027402
GO:0044255 cellular lipid metabolic process 3.46% (10/289) 1.48 0.003475 0.027555
GO:0016790 thiolester hydrolase activity 1.04% (3/289) 3.29 0.003604 0.028287
GO:0004630 phospholipase D activity 0.69% (2/289) 4.39 0.003946 0.030056
GO:0009226 nucleotide-sugar biosynthetic process 0.69% (2/289) 4.39 0.003946 0.030056
GO:0072524 pyridine-containing compound metabolic process 1.73% (5/289) 2.28 0.003902 0.030316
GO:0032446 protein modification by small protein conjugation 2.08% (6/289) 2.0 0.004152 0.031324
GO:0097435 supramolecular fiber organization 1.38% (4/289) 2.6 0.004381 0.032733
GO:0042578 phosphoric ester hydrolase activity 3.11% (9/289) 1.53 0.004493 0.033247
GO:0047617 acyl-CoA hydrolase activity 0.69% (2/289) 4.29 0.004581 0.03358
GO:0004842 ubiquitin-protein transferase activity 2.42% (7/289) 1.78 0.004689 0.03405
GO:0015075 monoatomic ion transmembrane transporter activity 3.11% (9/289) 1.5 0.005059 0.036397
GO:0019359 nicotinamide nucleotide biosynthetic process 0.69% (2/289) 4.19 0.00526 0.037158
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors 0.69% (2/289) 4.19 0.00526 0.037158
GO:0019787 ubiquitin-like protein transferase activity 2.42% (7/289) 1.73 0.005556 0.038894
GO:0030042 actin filament depolymerization 0.69% (2/289) 4.09 0.005983 0.040424
GO:0051261 protein depolymerization 0.69% (2/289) 4.09 0.005983 0.040424
GO:0046351 disaccharide biosynthetic process 1.04% (3/289) 3.04 0.005895 0.040896
GO:0016755 aminoacyltransferase activity 2.42% (7/289) 1.71 0.005978 0.041107
GO:0009312 oligosaccharide biosynthetic process 1.04% (3/289) 3.01 0.00623 0.041373
GO:0090407 organophosphate biosynthetic process 2.42% (7/289) 1.7 0.006198 0.041515
GO:0046872 metal ion binding 8.65% (25/289) 0.77 0.006613 0.043544
GO:0019363 pyridine nucleotide biosynthetic process 0.69% (2/289) 4.01 0.006748 0.044062
GO:0016303 1-phosphatidylinositol-3-kinase activity 0.35% (1/289) 7.09 0.007317 0.04512
GO:0045181 glutamate synthase activity, NAD(P)H as acceptor 0.35% (1/289) 7.09 0.007317 0.04512
GO:0016040 glutamate synthase (NADH) activity 0.35% (1/289) 7.09 0.007317 0.04512
GO:0071692 protein localization to extracellular region 0.35% (1/289) 7.09 0.007317 0.04512
GO:0035592 establishment of protein localization to extracellular region 0.35% (1/289) 7.09 0.007317 0.04512
GO:0009306 protein secretion 0.35% (1/289) 7.09 0.007317 0.04512
GO:0009987 cellular process 30.1% (87/289) 0.35 0.007096 0.045946
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (289) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms