Coexpression cluster: Cluster_271 (Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0036402 proteasome-activating activity 5.0% (5/100) 7.04 0.0 0.0
GO:0009057 macromolecule catabolic process 10.0% (10/100) 3.65 0.0 1e-06
GO:0032991 protein-containing complex 20.0% (20/100) 2.23 0.0 2e-06
GO:0005838 proteasome regulatory particle 3.0% (3/100) 7.63 0.0 3.3e-05
GO:0030163 protein catabolic process 5.0% (5/100) 4.78 1e-06 9.8e-05
GO:1901575 organic substance catabolic process 10.0% (10/100) 2.54 9e-06 0.00063
GO:0005575 cellular_component 28.0% (28/100) 1.2 1.5e-05 0.000733
GO:0140657 ATP-dependent activity 11.0% (11/100) 2.3 1.5e-05 0.000818
GO:0051603 proteolysis involved in protein catabolic process 6.0% (6/100) 3.44 2e-05 0.00087
GO:0009056 catabolic process 10.0% (10/100) 2.46 1.5e-05 0.000896
GO:1901564 organonitrogen compound metabolic process 27.0% (27/100) 1.19 2.8e-05 0.001076
GO:0005737 cytoplasm 6.0% (6/100) 3.31 3.4e-05 0.001213
GO:1902494 catalytic complex 8.0% (8/100) 2.64 4.7e-05 0.001535
GO:0006891 intra-Golgi vesicle-mediated transport 2.0% (2/100) 7.3 6.3e-05 0.001793
GO:0099023 vesicle tethering complex 4.0% (4/100) 4.25 6.1e-05 0.001855
GO:0019538 protein metabolic process 22.0% (22/100) 1.22 0.000135 0.002209
GO:0032555 purine ribonucleotide binding 20.0% (20/100) 1.31 0.000132 0.002255
GO:0006354 DNA-templated transcription elongation 2.0% (2/100) 6.63 0.000176 0.002342
GO:0006368 transcription elongation by RNA polymerase II 2.0% (2/100) 6.63 0.000176 0.002342
GO:0008303 caspase complex 2.0% (2/100) 6.82 0.000132 0.002346
GO:0042765 GPI-anchor transamidase complex 2.0% (2/100) 6.82 0.000132 0.002346
GO:0032553 ribonucleotide binding 20.0% (20/100) 1.29 0.000151 0.002378
GO:0043632 modification-dependent macromolecule catabolic process 5.0% (5/100) 3.43 0.000107 0.00239
GO:0019941 modification-dependent protein catabolic process 5.0% (5/100) 3.43 0.000107 0.00239
GO:0006511 ubiquitin-dependent protein catabolic process 5.0% (5/100) 3.43 0.000107 0.00239
GO:0005524 ATP binding 18.0% (18/100) 1.37 0.000169 0.002404
GO:0019783 ubiquitin-like protein peptidase activity 4.0% (4/100) 3.98 0.000126 0.002437
GO:0101005 deubiquitinase activity 4.0% (4/100) 4.0 0.000121 0.002456
GO:0097367 carbohydrate derivative binding 20.0% (20/100) 1.28 0.000168 0.002466
GO:0006508 proteolysis 10.0% (10/100) 2.04 0.000162 0.002472
GO:0140535 intracellular protein-containing complex 6.0% (6/100) 2.99 0.000118 0.002503
GO:0032559 adenyl ribonucleotide binding 19.0% (19/100) 1.38 0.000101 0.002679
GO:0035639 purine ribonucleoside triphosphate binding 19.0% (19/100) 1.29 0.000222 0.002698
GO:0030554 adenyl nucleotide binding 19.0% (19/100) 1.3 0.000214 0.002756
GO:0005488 binding 49.0% (49/100) 0.63 0.00022 0.002763
GO:0005515 protein binding 24.0% (24/100) 1.09 0.000247 0.002928
GO:0017076 purine nucleotide binding 20.0% (20/100) 1.23 0.000272 0.003137
GO:0017119 Golgi transport complex 2.0% (2/100) 6.3 0.000282 0.003159
GO:1901565 organonitrogen compound catabolic process 5.0% (5/100) 3.08 0.000333 0.003639
GO:0016874 ligase activity 5.0% (5/100) 3.03 0.000388 0.004137
GO:1901265 nucleoside phosphate binding 20.0% (20/100) 1.15 0.00053 0.005373
GO:0000166 nucleotide binding 20.0% (20/100) 1.15 0.00053 0.005373
GO:0043170 macromolecule metabolic process 27.0% (27/100) 0.93 0.000545 0.005401
GO:0043168 anion binding 20.0% (20/100) 1.14 0.00059 0.005708
GO:0016787 hydrolase activity 19.0% (19/100) 1.18 0.000618 0.005849
GO:1905369 endopeptidase complex 2.0% (2/100) 5.72 0.000652 0.006039
GO:0006807 nitrogen compound metabolic process 29.0% (29/100) 0.86 0.00075 0.006797
GO:0008150 biological_process 53.0% (53/100) 0.52 0.000844 0.007189
GO:0044389 ubiquitin-like protein ligase binding 2.0% (2/100) 5.54 0.000842 0.007319
GO:0031625 ubiquitin protein ligase binding 2.0% (2/100) 5.54 0.000842 0.007319
GO:1901363 heterocyclic compound binding 20.0% (20/100) 1.09 0.000912 0.007621
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 3.0% (3/100) 3.98 0.000932 0.007631
GO:0036094 small molecule binding 20.0% (20/100) 1.08 0.001021 0.008057
GO:0016859 cis-trans isomerase activity 3.0% (3/100) 3.94 0.001005 0.008081
GO:0008017 microtubule binding 4.0% (4/100) 3.09 0.001313 0.009811
GO:0070122 obsolete isopeptidase activity 2.0% (2/100) 5.23 0.001291 0.009824
GO:0140492 metal-dependent deubiquitinase activity 2.0% (2/100) 5.23 0.001291 0.009824
GO:0019899 enzyme binding 3.0% (3/100) 3.78 0.001384 0.010163
GO:0005092 GDP-dissociation inhibitor activity 2.0% (2/100) 5.1 0.001551 0.011197
GO:0007018 microtubule-based movement 3.0% (3/100) 3.69 0.001679 0.011728
GO:0003777 microtubule motor activity 3.0% (3/100) 3.69 0.001679 0.011728
GO:0015631 tubulin binding 4.0% (4/100) 2.97 0.001775 0.012198
GO:0140096 catalytic activity, acting on a protein 17.0% (17/100) 1.11 0.00197 0.013323
GO:0008233 peptidase activity 8.0% (8/100) 1.81 0.002061 0.013722
GO:0048278 vesicle docking 1.0% (1/100) 8.63 0.002532 0.015631
GO:0006904 vesicle docking involved in exocytosis 1.0% (1/100) 8.63 0.002532 0.015631
GO:0022406 membrane docking 1.0% (1/100) 8.63 0.002532 0.015631
GO:0140056 organelle localization by membrane tethering 1.0% (1/100) 8.63 0.002532 0.015631
GO:0051011 microtubule minus-end binding 1.0% (1/100) 8.63 0.002532 0.015631
GO:0098796 membrane protein complex 5.0% (5/100) 2.38 0.002832 0.016993
GO:1905368 peptidase complex 2.0% (2/100) 4.67 0.002813 0.017118
GO:0016192 vesicle-mediated transport 5.0% (5/100) 2.34 0.003165 0.018221
GO:0003774 cytoskeletal motor activity 3.0% (3/100) 3.38 0.003089 0.018278
GO:1990234 transferase complex 4.0% (4/100) 2.74 0.003159 0.018437
GO:0016887 ATP hydrolysis activity 5.0% (5/100) 2.33 0.003342 0.018982
GO:0007264 small GTPase mediated signal transduction 2.0% (2/100) 4.5 0.003576 0.020043
GO:0031461 cullin-RING ubiquitin ligase complex 2.0% (2/100) 4.46 0.00378 0.020643
GO:0140534 endoplasmic reticulum protein-containing complex 2.0% (2/100) 4.46 0.00378 0.020643
GO:0006221 pyrimidine nucleotide biosynthetic process 2.0% (2/100) 4.42 0.003989 0.021243
GO:0006220 pyrimidine nucleotide metabolic process 2.0% (2/100) 4.42 0.003989 0.021243
GO:0043167 ion binding 24.0% (24/100) 0.8 0.004222 0.022204
GO:0046073 dTMP metabolic process 1.0% (1/100) 7.63 0.005057 0.024206
GO:0010506 regulation of autophagy 1.0% (1/100) 7.63 0.005057 0.024206
GO:0032367 intracellular cholesterol transport 1.0% (1/100) 7.63 0.005057 0.024206
GO:0042083 5,10-methylenetetrahydrofolate-dependent methyltransferase activity 1.0% (1/100) 7.63 0.005057 0.024206
GO:0005802 trans-Golgi network 1.0% (1/100) 7.63 0.005057 0.024206
GO:0030301 cholesterol transport 1.0% (1/100) 7.63 0.005057 0.024206
GO:0004799 thymidylate synthase activity 1.0% (1/100) 7.63 0.005057 0.024206
GO:0006231 dTMP biosynthetic process 1.0% (1/100) 7.63 0.005057 0.024206
GO:0000151 ubiquitin ligase complex 2.0% (2/100) 4.23 0.005115 0.024211
GO:0044238 primary metabolic process 30.0% (30/100) 0.66 0.005424 0.025394
GO:0090079 translation regulator activity, nucleic acid binding 3.0% (3/100) 3.07 0.005593 0.025622
GO:0008135 translation factor activity, RNA binding 3.0% (3/100) 3.07 0.005593 0.025622
GO:0045182 translation regulator activity 3.0% (3/100) 3.0 0.006393 0.028669
GO:0005839 proteasome core complex 2.0% (2/100) 4.07 0.006369 0.028866
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.0% (6/100) 1.83 0.00699 0.031018
GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process 1.0% (1/100) 7.04 0.007576 0.031034
GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process 1.0% (1/100) 7.04 0.007576 0.031034
GO:0098791 Golgi apparatus subcompartment 1.0% (1/100) 7.04 0.007576 0.031034
GO:0031984 organelle subcompartment 1.0% (1/100) 7.04 0.007576 0.031034
GO:0009162 deoxyribonucleoside monophosphate metabolic process 1.0% (1/100) 7.04 0.007576 0.031034
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process 1.0% (1/100) 7.04 0.007576 0.031034
GO:0035658 Mon1-Ccz1 complex 1.0% (1/100) 7.04 0.007576 0.031034
GO:0032045 guanyl-nucleotide exchange factor complex 1.0% (1/100) 7.04 0.007576 0.031034
GO:0071704 organic substance metabolic process 31.0% (31/100) 0.6 0.007984 0.032393
GO:0072528 pyrimidine-containing compound biosynthetic process 2.0% (2/100) 3.87 0.008335 0.033499
GO:0008092 cytoskeletal protein binding 4.0% (4/100) 2.31 0.008924 0.03553
GO:0072527 pyrimidine-containing compound metabolic process 2.0% (2/100) 3.79 0.009251 0.03649
GO:0004832 valine-tRNA ligase activity 1.0% (1/100) 6.63 0.010089 0.037373
GO:0004146 dihydrofolate reductase activity 1.0% (1/100) 6.63 0.010089 0.037373
GO:0003953 NAD+ nucleosidase activity 1.0% (1/100) 6.63 0.010089 0.037373
GO:0006435 threonyl-tRNA aminoacylation 1.0% (1/100) 6.63 0.010089 0.037373
GO:0006438 valyl-tRNA aminoacylation 1.0% (1/100) 6.63 0.010089 0.037373
GO:0004829 threonine-tRNA ligase activity 1.0% (1/100) 6.63 0.010089 0.037373
GO:0000145 exocyst 2.0% (2/100) 3.72 0.010209 0.037492
GO:0016462 pyrophosphatase activity 6.0% (6/100) 1.72 0.009975 0.038985
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.0% (6/100) 1.7 0.010828 0.039424
GO:0016579 protein deubiquitination 2.0% (2/100) 3.65 0.01121 0.040128
GO:0016817 hydrolase activity, acting on acid anhydrides 6.0% (6/100) 1.68 0.011308 0.040143
GO:0008152 metabolic process 32.0% (32/100) 0.56 0.011154 0.040267
GO:0015031 protein transport 4.0% (4/100) 2.18 0.011979 0.042175
GO:0070646 protein modification by small protein removal 2.0% (2/100) 3.56 0.012608 0.042967
GO:0051640 organelle localization 1.0% (1/100) 6.3 0.012596 0.043272
GO:0032777 piccolo histone acetyltransferase complex 1.0% (1/100) 6.3 0.012596 0.043272
GO:0016593 Cdc73/Paf1 complex 1.0% (1/100) 6.3 0.012596 0.043272
GO:0051641 cellular localization 5.0% (5/100) 1.83 0.013799 0.046654
GO:0046654 tetrahydrofolate biosynthetic process 1.0% (1/100) 6.04 0.015096 0.04694
GO:0031329 regulation of cellular catabolic process 1.0% (1/100) 6.04 0.015096 0.04694
GO:0009555 pollen development 1.0% (1/100) 6.04 0.015096 0.04694
GO:0015850 organic hydroxy compound transport 1.0% (1/100) 6.04 0.015096 0.04694
GO:0015918 sterol transport 1.0% (1/100) 6.04 0.015096 0.04694
GO:0009129 pyrimidine nucleoside monophosphate metabolic process 1.0% (1/100) 6.04 0.015096 0.04694
GO:0032366 intracellular sterol transport 1.0% (1/100) 6.04 0.015096 0.04694
GO:0048229 gametophyte development 1.0% (1/100) 6.04 0.015096 0.04694
GO:0035145 exon-exon junction complex 1.0% (1/100) 6.04 0.015096 0.04694
GO:0016255 attachment of GPI anchor to protein 1.0% (1/100) 6.04 0.015096 0.04694
GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process 1.0% (1/100) 6.04 0.015096 0.04694
GO:0009219 pyrimidine deoxyribonucleotide metabolic process 1.0% (1/100) 5.82 0.01759 0.048975
GO:0140029 exocytic process 1.0% (1/100) 5.82 0.01759 0.048975
GO:0090522 vesicle tethering involved in exocytosis 1.0% (1/100) 5.82 0.01759 0.048975
GO:0099022 vesicle tethering 1.0% (1/100) 5.82 0.01759 0.048975
GO:0032365 intracellular lipid transport 1.0% (1/100) 5.82 0.01759 0.048975
GO:0008318 protein prenyltransferase activity 1.0% (1/100) 5.82 0.01759 0.048975
GO:0046385 deoxyribose phosphate biosynthetic process 1.0% (1/100) 5.82 0.01759 0.048975
GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process 1.0% (1/100) 5.82 0.01759 0.048975
GO:0009265 2'-deoxyribonucleotide biosynthetic process 1.0% (1/100) 5.82 0.01759 0.048975
GO:0009394 2'-deoxyribonucleotide metabolic process 1.0% (1/100) 5.82 0.01759 0.048975
GO:0019692 deoxyribose phosphate metabolic process 1.0% (1/100) 5.82 0.01759 0.048975
GO:0035556 intracellular signal transduction 3.0% (3/100) 2.51 0.016016 0.049086
GO:0004843 cysteine-type deubiquitinase activity 2.0% (2/100) 3.38 0.016014 0.049435
GO:0045184 establishment of protein localization 4.0% (4/100) 2.0 0.018075 0.049676
GO:0046907 intracellular transport 4.0% (4/100) 2.0 0.018225 0.049768
GO:0071702 organic substance transport 5.0% (5/100) 1.76 0.016379 0.049839
GO:0030117 membrane coat 2.0% (2/100) 3.29 0.018058 0.049952
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (100) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms