Coexpression cluster: Cluster_104 (Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0099081 supramolecular polymer 9.57% (9/94) 5.78 0.0 0.0
GO:0099512 supramolecular fiber 9.57% (9/94) 5.78 0.0 0.0
GO:0099513 polymeric cytoskeletal fiber 9.57% (9/94) 5.78 0.0 0.0
GO:0005874 microtubule 9.57% (9/94) 5.78 0.0 0.0
GO:0099080 supramolecular complex 9.57% (9/94) 5.68 0.0 0.0
GO:0005200 structural constituent of cytoskeleton 7.45% (7/94) 6.57 0.0 0.0
GO:0007017 microtubule-based process 10.64% (10/94) 4.3 0.0 0.0
GO:0003924 GTPase activity 8.51% (8/94) 3.63 0.0 1.4e-05
GO:0019001 guanyl nucleotide binding 8.51% (8/94) 3.38 1e-06 3.7e-05
GO:0005525 GTP binding 8.51% (8/94) 3.4 1e-06 3.7e-05
GO:0032561 guanyl ribonucleotide binding 8.51% (8/94) 3.4 1e-06 3.7e-05
GO:0005488 binding 53.19% (50/94) 0.75 1.2e-05 0.000365
GO:0004001 adenosine kinase activity 2.13% (2/94) 8.13 1.7e-05 0.000471
GO:0042451 purine nucleoside biosynthetic process 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0009163 nucleoside biosynthetic process 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0034404 nucleobase-containing small molecule biosynthetic process 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0006166 purine ribonucleoside salvage 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0042278 purine nucleoside metabolic process 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0042455 ribonucleoside biosynthetic process 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0046129 purine ribonucleoside biosynthetic process 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0019206 nucleoside kinase activity 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:1901659 glycosyl compound biosynthetic process 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0043174 nucleoside salvage 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0046128 purine ribonucleoside metabolic process 2.13% (2/94) 7.71 3.4e-05 0.00051
GO:0044283 small molecule biosynthetic process 7.45% (7/94) 2.94 3.7e-05 0.000544
GO:0006520 amino acid metabolic process 7.45% (7/94) 2.93 3.9e-05 0.000549
GO:0097159 organic cyclic compound binding 36.17% (34/94) 0.93 7.1e-05 0.000956
GO:0009119 ribonucleoside metabolic process 2.13% (2/94) 7.13 8.4e-05 0.001089
GO:0008289 lipid binding 5.32% (5/94) 3.27 0.00018 0.002268
GO:0017111 ribonucleoside triphosphate phosphatase activity 8.51% (8/94) 2.34 0.000193 0.002352
GO:1901657 glycosyl compound metabolic process 2.13% (2/94) 6.39 0.000249 0.002755
GO:0043101 purine-containing compound salvage 2.13% (2/94) 6.39 0.000249 0.002755
GO:0009116 nucleoside metabolic process 2.13% (2/94) 6.39 0.000249 0.002755
GO:0016462 pyrophosphatase activity 8.51% (8/94) 2.23 0.000323 0.003471
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 8.51% (8/94) 2.2 0.000364 0.003798
GO:1901363 heterocyclic compound binding 21.28% (20/94) 1.18 0.000397 0.003815
GO:0016817 hydrolase activity, acting on acid anhydrides 8.51% (8/94) 2.19 0.000388 0.003827
GO:0044281 small molecule metabolic process 10.64% (10/94) 1.88 0.000387 0.00392
GO:0110165 cellular anatomical entity 20.21% (19/94) 1.22 0.000419 0.003925
GO:0036094 small molecule binding 21.28% (20/94) 1.17 0.000447 0.004078
GO:0032553 ribonucleotide binding 19.15% (18/94) 1.23 0.000549 0.004885
GO:0000166 nucleotide binding 20.21% (19/94) 1.17 0.000629 0.004994
GO:1901265 nucleoside phosphate binding 20.21% (19/94) 1.17 0.000629 0.004994
GO:0006544 glycine metabolic process 2.13% (2/94) 5.81 0.000577 0.005011
GO:0003674 molecular_function 69.15% (65/94) 0.41 0.000613 0.005089
GO:0097367 carbohydrate derivative binding 19.15% (18/94) 1.22 0.000603 0.005121
GO:0043168 anion binding 20.21% (19/94) 1.16 0.000697 0.005415
GO:0043167 ion binding 26.6% (25/94) 0.95 0.000762 0.005562
GO:0016053 organic acid biosynthetic process 5.32% (5/94) 2.82 0.00075 0.005588
GO:0046394 carboxylic acid biosynthetic process 5.32% (5/94) 2.82 0.00075 0.005588
GO:0035639 purine ribonucleoside triphosphate binding 18.09% (17/94) 1.22 0.000837 0.005988
GO:0017076 purine nucleotide binding 19.15% (18/94) 1.16 0.000923 0.00648
GO:1901605 alpha-amino acid metabolic process 4.26% (4/94) 3.18 0.001043 0.007186
GO:0006082 organic acid metabolic process 7.45% (7/94) 2.08 0.001406 0.008846
GO:0043436 oxoacid metabolic process 7.45% (7/94) 2.08 0.001394 0.008928
GO:0032555 purine ribonucleotide binding 18.09% (17/94) 1.16 0.001349 0.008952
GO:0019752 carboxylic acid metabolic process 7.45% (7/94) 2.08 0.001383 0.009013
GO:0005198 structural molecule activity 7.45% (7/94) 2.09 0.001338 0.009044
GO:0006555 methionine metabolic process 2.13% (2/94) 5.01 0.001755 0.010674
GO:0005575 cellular_component 23.4% (22/94) 0.94 0.001752 0.01084
GO:0043094 cellular metabolic compound salvage 2.13% (2/94) 4.91 0.002034 0.012174
GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity 1.06% (1/94) 8.71 0.00238 0.013788
GO:0051014 actin filament severing 1.06% (1/94) 8.71 0.00238 0.013788
GO:0030029 actin filament-based process 2.13% (2/94) 4.71 0.002653 0.015131
GO:0046508 hydrolase activity, acting on carbon-sulfur bonds 1.06% (1/94) 7.71 0.004754 0.024101
GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity 1.06% (1/94) 7.71 0.004754 0.024101
GO:0004107 chorismate synthase activity 1.06% (1/94) 7.71 0.004754 0.024101
GO:0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity 1.06% (1/94) 7.71 0.004754 0.024101
GO:0004013 adenosylhomocysteinase activity 1.06% (1/94) 7.71 0.004754 0.024101
GO:0009987 cellular process 36.17% (34/94) 0.61 0.004363 0.024497
GO:0000096 sulfur amino acid metabolic process 2.13% (2/94) 4.29 0.004749 0.02587
GO:0009069 serine family amino acid metabolic process 2.13% (2/94) 4.29 0.004749 0.02587
GO:0008652 amino acid biosynthetic process 3.19% (3/94) 3.11 0.005188 0.025938
GO:0019205 nucleobase-containing compound kinase activity 2.13% (2/94) 4.19 0.005418 0.026723
GO:0009073 aromatic amino acid family biosynthetic process 2.13% (2/94) 4.16 0.00565 0.027496
GO:0016838 carbon-oxygen lyase activity, acting on phosphates 2.13% (2/94) 4.13 0.005887 0.028271
GO:1901564 organonitrogen compound metabolic process 21.28% (20/94) 0.84 0.006446 0.030558
GO:0009719 response to endogenous stimulus 3.19% (3/94) 2.93 0.007267 0.030842
GO:0003677 DNA binding 11.7% (11/94) 1.23 0.007262 0.031182
GO:0008092 cytoskeletal protein binding 4.26% (4/94) 2.4 0.007205 0.031308
GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity 1.06% (1/94) 7.13 0.007123 0.031323
GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 1.06% (1/94) 7.13 0.007123 0.031323
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 1.06% (1/94) 7.13 0.007123 0.031323
GO:0009066 aspartate family amino acid metabolic process 2.13% (2/94) 4.01 0.006877 0.032182
GO:0008150 biological_process 50.0% (47/94) 0.43 0.007069 0.032254
GO:0009725 response to hormone 3.19% (3/94) 2.95 0.007028 0.032472
GO:0010033 response to organic substance 3.19% (3/94) 2.71 0.011119 0.046648
GO:0008172 S-methyltransferase activity 1.06% (1/94) 6.39 0.011843 0.047504
GO:0016758 hexosyltransferase activity 4.26% (4/94) 2.2 0.011508 0.047731
GO:0043231 intracellular membrane-bounded organelle 6.38% (6/94) 1.67 0.011784 0.047791
GO:0043227 membrane-bounded organelle 6.38% (6/94) 1.67 0.011784 0.047791
GO:0044249 cellular biosynthetic process 10.64% (10/94) 1.19 0.012446 0.04938
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (94) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms