Coexpression cluster: Cluster_5709 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006378 mRNA polyadenylation 33.33% (1/3) 9.55 0.001332 0.009422
GO:0098739 import across plasma membrane 33.33% (1/3) 9.86 0.001078 0.009701
GO:0015386 potassium:proton antiporter activity 33.33% (1/3) 9.6 0.001287 0.009804
GO:0022821 solute:potassium antiporter activity 33.33% (1/3) 9.6 0.001287 0.009804
GO:0099587 inorganic ion import across plasma membrane 33.33% (1/3) 9.86 0.001073 0.010622
GO:0098659 inorganic cation import across plasma membrane 33.33% (1/3) 9.86 0.001073 0.010622
GO:0031124 mRNA 3'-end processing 33.33% (1/3) 8.95 0.002016 0.011085
GO:0140828 metal cation:monoatomic cation antiporter activity 33.33% (1/3) 9.01 0.001936 0.011273
GO:0051139 metal cation:proton antiporter activity 33.33% (1/3) 9.01 0.001936 0.011273
GO:0019205 nucleobase-containing compound kinase activity 33.33% (1/3) 9.18 0.001721 0.011361
GO:0051453 regulation of intracellular pH 33.33% (1/3) 8.74 0.00233 0.011531
GO:0030641 regulation of cellular pH 33.33% (1/3) 8.74 0.00233 0.011531
GO:0006814 sodium ion transport 33.33% (1/3) 9.89 0.001053 0.013031
GO:0006885 regulation of pH 33.33% (1/3) 8.42 0.002918 0.013754
GO:0015081 sodium ion transmembrane transporter activity 33.33% (1/3) 10.0 0.000973 0.013763
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 33.33% (1/3) 11.2 0.000424 0.014001
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 33.33% (1/3) 11.2 0.000424 0.014001
GO:0035725 sodium ion transmembrane transport 33.33% (1/3) 10.01 0.000968 0.015975
GO:0006813 potassium ion transport 33.33% (1/3) 7.62 0.005083 0.018639
GO:0031123 RNA 3'-end processing 33.33% (1/3) 7.72 0.004735 0.018751
GO:0071805 potassium ion transmembrane transport 33.33% (1/3) 7.9 0.004188 0.018844
GO:0015079 potassium ion transmembrane transporter activity 33.33% (1/3) 7.66 0.004949 0.018845
GO:1902600 proton transmembrane transport 33.33% (1/3) 7.83 0.004402 0.018946
GO:0015385 sodium:proton antiporter activity 33.33% (1/3) 10.02 0.000963 0.019071
GO:0098657 import into cell 33.33% (1/3) 7.73 0.00469 0.019348
GO:0030003 intracellular monoatomic cation homeostasis 33.33% (1/3) 7.44 0.005755 0.020348
GO:0015078 proton transmembrane transporter activity 33.33% (1/3) 7.33 0.006222 0.020534
GO:0015297 antiporter activity 33.33% (1/3) 6.96 0.008036 0.020936
GO:0019725 cellular homeostasis 33.33% (1/3) 6.96 0.008036 0.020936
GO:0055082 intracellular chemical homeostasis 33.33% (1/3) 7.16 0.006988 0.020963
GO:0006873 intracellular monoatomic ion homeostasis 33.33% (1/3) 7.33 0.006188 0.021123
GO:0008033 tRNA processing 33.33% (1/3) 7.16 0.006983 0.021603
GO:0008380 RNA splicing 33.33% (1/3) 6.98 0.007917 0.021771
GO:0050801 monoatomic ion homeostasis 33.33% (1/3) 7.06 0.00749 0.021808
GO:0055080 monoatomic cation homeostasis 33.33% (1/3) 7.19 0.006839 0.02184
GO:0022853 active monoatomic ion transmembrane transporter activity 33.33% (1/3) 7.0 0.007793 0.022042
GO:0098719 sodium ion import across plasma membrane 33.33% (1/3) 10.03 0.000958 0.023716
GO:0046873 metal ion transmembrane transporter activity 33.33% (1/3) 6.32 0.012449 0.025151
GO:0034220 monoatomic ion transmembrane transport 33.33% (1/3) 6.43 0.011582 0.02548
GO:0098660 inorganic ion transmembrane transport 33.33% (1/3) 6.33 0.012354 0.025481
GO:0015291 secondary active transmembrane transporter activity 33.33% (1/3) 6.59 0.010313 0.025525
GO:0065008 regulation of biological quality 33.33% (1/3) 6.39 0.011899 0.025609
GO:0006397 mRNA processing 33.33% (1/3) 6.55 0.010606 0.025609
GO:0042592 homeostatic process 33.33% (1/3) 6.48 0.011161 0.025696
GO:0051731 polynucleotide 5'-hydroxyl-kinase activity 33.33% (1/3) 11.91 0.00026 0.025698
GO:0030001 metal ion transport 33.33% (1/3) 6.34 0.012256 0.025815
GO:0098662 inorganic cation transmembrane transport 33.33% (1/3) 6.44 0.011508 0.025892
GO:0048878 chemical homeostasis 33.33% (1/3) 6.61 0.010214 0.025928
GO:0098655 monoatomic cation transmembrane transport 33.33% (1/3) 6.49 0.011082 0.026121
GO:1901702 salt transmembrane transporter activity 33.33% (1/3) 6.16 0.013968 0.027656
GO:0006399 tRNA metabolic process 33.33% (1/3) 6.05 0.015006 0.029129
GO:0006812 monoatomic cation transport 33.33% (1/3) 5.92 0.016448 0.031315
GO:0016071 mRNA metabolic process 33.33% (1/3) 5.85 0.017218 0.031567
GO:0022890 inorganic cation transmembrane transporter activity 33.33% (1/3) 5.86 0.017135 0.032006
GO:0008324 monoatomic cation transmembrane transporter activity 33.33% (1/3) 5.72 0.018915 0.033439
GO:0006811 monoatomic ion transport 33.33% (1/3) 5.72 0.018831 0.033896
GO:0034470 ncRNA processing 33.33% (1/3) 5.53 0.021432 0.036582
GO:0015318 inorganic molecular entity transmembrane transporter activity 33.33% (1/3) 5.55 0.021126 0.036693
GO:0015075 monoatomic ion transmembrane transporter activity 33.33% (1/3) 5.43 0.022956 0.03852
GO:0022804 active transmembrane transporter activity 33.33% (1/3) 5.15 0.027854 0.045959
GO:0034660 ncRNA metabolic process 33.33% (1/3) 5.05 0.029827 0.048407
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms