Coexpression cluster: Cluster_2400 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043136 glycerol-3-phosphatase activity 25.0% (1/4) 11.95 0.000253 0.01273
GO:0019401 alditol biosynthetic process 25.0% (1/4) 11.95 0.000253 0.01273
GO:0006114 glycerol biosynthetic process 25.0% (1/4) 11.95 0.000253 0.01273
GO:0098739 import across plasma membrane 25.0% (1/4) 9.44 0.001437 0.014466
GO:0015386 potassium:proton antiporter activity 25.0% (1/4) 9.19 0.001716 0.015244
GO:0022821 solute:potassium antiporter activity 25.0% (1/4) 9.19 0.001716 0.015244
GO:0099587 inorganic ion import across plasma membrane 25.0% (1/4) 9.45 0.00143 0.015427
GO:0098659 inorganic cation import across plasma membrane 25.0% (1/4) 9.45 0.00143 0.015427
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 25.0% (1/4) 11.11 0.000453 0.017084
GO:0030015 CCR4-NOT core complex 25.0% (1/4) 9.47 0.00141 0.017747
GO:0006814 sodium ion transport 25.0% (1/4) 9.48 0.001404 0.01927
GO:0140828 metal cation:monoatomic cation antiporter activity 25.0% (1/4) 8.6 0.00258 0.01948
GO:0051139 metal cation:proton antiporter activity 25.0% (1/4) 8.6 0.00258 0.01948
GO:0019400 alditol metabolic process 25.0% (1/4) 9.57 0.001311 0.019791
GO:0046173 polyol biosynthetic process 25.0% (1/4) 8.73 0.002361 0.019805
GO:0051453 regulation of intracellular pH 25.0% (1/4) 8.33 0.003105 0.021311
GO:0030641 regulation of cellular pH 25.0% (1/4) 8.33 0.003105 0.021311
GO:0006071 glycerol metabolic process 25.0% (1/4) 9.58 0.001304 0.021878
GO:0019751 polyol metabolic process 25.0% (1/4) 7.91 0.004147 0.022365
GO:0035770 ribonucleoprotein granule 25.0% (1/4) 7.94 0.004061 0.022711
GO:0036464 cytoplasmic ribonucleoprotein granule 25.0% (1/4) 7.96 0.004001 0.023237
GO:0000932 P-body 25.0% (1/4) 8.13 0.00357 0.023436
GO:0006885 regulation of pH 25.0% (1/4) 8.0 0.003888 0.023485
GO:0046165 alcohol biosynthetic process 25.0% (1/4) 8.06 0.003736 0.023503
GO:0015081 sodium ion transmembrane transporter activity 25.0% (1/4) 9.59 0.001297 0.024488
GO:0035725 sodium ion transmembrane transport 25.0% (1/4) 9.6 0.001291 0.027842
GO:0000956 nuclear-transcribed mRNA catabolic process 25.0% (1/4) 7.41 0.005865 0.028566
GO:1902600 proton transmembrane transport 25.0% (1/4) 7.41 0.005865 0.028566
GO:0071805 potassium ion transmembrane transport 25.0% (1/4) 7.48 0.00558 0.029052
GO:0098657 import into cell 25.0% (1/4) 7.32 0.006249 0.029487
GO:0006813 potassium ion transport 25.0% (1/4) 7.2 0.006772 0.030077
GO:0015079 potassium ion transmembrane transporter activity 25.0% (1/4) 7.24 0.006593 0.03017
GO:1901617 organic hydroxy compound biosynthetic process 25.0% (1/4) 7.08 0.007395 0.030178
GO:0030003 intracellular monoatomic cation homeostasis 25.0% (1/4) 7.02 0.007666 0.030462
GO:0006066 alcohol metabolic process 25.0% (1/4) 7.08 0.007375 0.030933
GO:0015078 proton transmembrane transporter activity 25.0% (1/4) 6.91 0.008288 0.031287
GO:0006402 mRNA catabolic process 25.0% (1/4) 7.1 0.007282 0.031417
GO:0006401 RNA catabolic process 25.0% (1/4) 6.85 0.008619 0.031742
GO:0006873 intracellular monoatomic ion homeostasis 25.0% (1/4) 6.92 0.008242 0.03191
GO:0015385 sodium:proton antiporter activity 25.0% (1/4) 9.6 0.001284 0.032315
GO:0055082 intracellular chemical homeostasis 25.0% (1/4) 6.74 0.009306 0.03268
GO:0055080 monoatomic cation homeostasis 25.0% (1/4) 6.77 0.009108 0.032745
GO:0005768 endosome 25.0% (1/4) 6.7 0.009564 0.032822
GO:0050801 monoatomic ion homeostasis 25.0% (1/4) 6.64 0.009974 0.033467
GO:0019725 cellular homeostasis 25.0% (1/4) 6.54 0.0107 0.033661
GO:0015297 antiporter activity 25.0% (1/4) 6.54 0.0107 0.033661
GO:0022853 active monoatomic ion transmembrane transporter activity 25.0% (1/4) 6.58 0.010377 0.034062
GO:0046873 metal ion transmembrane transporter activity 25.0% (1/4) 5.91 0.016564 0.037896
GO:0098660 inorganic ion transmembrane transport 25.0% (1/4) 5.92 0.016439 0.038188
GO:0010629 negative regulation of gene expression 25.0% (1/4) 5.93 0.016334 0.038537
GO:0098719 sodium ion import across plasma membrane 25.0% (1/4) 9.61 0.001277 0.038578
GO:0044270 cellular nitrogen compound catabolic process 25.0% (1/4) 5.83 0.017464 0.03878
GO:0046700 heterocycle catabolic process 25.0% (1/4) 5.83 0.017464 0.03878
GO:0034655 nucleobase-containing compound catabolic process 25.0% (1/4) 5.95 0.016025 0.039027
GO:0030001 metal ion transport 25.0% (1/4) 5.93 0.016307 0.039086
GO:0015291 secondary active transmembrane transporter activity 25.0% (1/4) 6.18 0.013727 0.03911
GO:0065008 regulation of biological quality 25.0% (1/4) 5.97 0.015834 0.039195
GO:0065007 biological regulation 50.0% (2/4) 3.14 0.017952 0.039286
GO:0034220 monoatomic ion transmembrane transport 25.0% (1/4) 6.01 0.015413 0.039446
GO:0048878 chemical homeostasis 25.0% (1/4) 6.19 0.013596 0.03948
GO:0031982 vesicle 25.0% (1/4) 5.97 0.015807 0.039782
GO:0098662 inorganic cation transmembrane transport 25.0% (1/4) 6.02 0.015314 0.039869
GO:0099080 supramolecular complex 25.0% (1/4) 6.21 0.01347 0.039883
GO:0031410 cytoplasmic vesicle 25.0% (1/4) 6.23 0.013213 0.039905
GO:0097708 intracellular vesicle 25.0% (1/4) 6.23 0.013213 0.039905
GO:0042592 homeostatic process 25.0% (1/4) 6.06 0.014853 0.040051
GO:1901702 salt transmembrane transporter activity 25.0% (1/4) 5.74 0.01858 0.04008
GO:0016051 carbohydrate biosynthetic process 25.0% (1/4) 6.02 0.015294 0.040516
GO:1901615 organic hydroxy compound metabolic process 25.0% (1/4) 6.07 0.014821 0.040689
GO:0098655 monoatomic cation transmembrane transport 25.0% (1/4) 6.08 0.014748 0.04124
GO:0019439 aromatic compound catabolic process 25.0% (1/4) 5.66 0.019636 0.041762
GO:1901361 organic cyclic compound catabolic process 25.0% (1/4) 5.63 0.019977 0.041897
GO:0010558 negative regulation of macromolecule biosynthetic process 25.0% (1/4) 5.56 0.020993 0.043424
GO:0006812 monoatomic cation transport 25.0% (1/4) 5.5 0.021871 0.043454
GO:0009890 negative regulation of biosynthetic process 25.0% (1/4) 5.52 0.021687 0.043664
GO:0031327 negative regulation of cellular biosynthetic process 25.0% (1/4) 5.52 0.021596 0.044067
GO:0016071 mRNA metabolic process 25.0% (1/4) 5.44 0.022892 0.044316
GO:0016791 phosphatase activity 25.0% (1/4) 5.41 0.023265 0.044468
GO:0009892 negative regulation of metabolic process 25.0% (1/4) 5.36 0.024154 0.044478
GO:0010605 negative regulation of macromolecule metabolic process 25.0% (1/4) 5.39 0.023644 0.044628
GO:0022890 inorganic cation transmembrane transporter activity 25.0% (1/4) 5.44 0.02278 0.044673
GO:0031324 negative regulation of cellular metabolic process 25.0% (1/4) 5.37 0.024023 0.044783
GO:0008324 monoatomic cation transmembrane transporter activity 25.0% (1/4) 5.3 0.02514 0.045192
GO:0006811 monoatomic ion transport 25.0% (1/4) 5.31 0.025029 0.045535
GO:0015318 inorganic molecular entity transmembrane transporter activity 25.0% (1/4) 5.14 0.028069 0.049864
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms