Coexpression cluster: Cluster_316 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030479 actin cortical patch 4.76% (5/105) 8.41 0.0 0.0
GO:0061645 endocytic patch 4.76% (5/105) 8.41 0.0 0.0
GO:0007166 cell surface receptor signaling pathway 8.57% (9/105) 5.01 0.0 0.0
GO:0034314 Arp2/3 complex-mediated actin nucleation 4.76% (5/105) 7.54 0.0 0.0
GO:0005885 Arp2/3 protein complex 4.76% (5/105) 7.59 0.0 0.0
GO:0045010 actin nucleation 4.76% (5/105) 6.4 0.0 0.0
GO:0043531 ADP binding 10.48% (11/105) 2.89 0.0 1.9e-05
GO:0032559 adenyl ribonucleotide binding 20.95% (22/105) 1.73 1e-06 3.1e-05
GO:0032555 purine ribonucleotide binding 20.95% (22/105) 1.65 1e-06 3.4e-05
GO:0009607 response to biotic stimulus 11.43% (12/105) 2.52 1e-06 3.4e-05
GO:0032553 ribonucleotide binding 20.95% (22/105) 1.64 2e-06 3.5e-05
GO:0051015 actin filament binding 4.76% (5/105) 4.71 2e-06 3.5e-05
GO:0007015 actin filament organization 4.76% (5/105) 4.76 1e-06 3.6e-05
GO:0097367 carbohydrate derivative binding 20.95% (22/105) 1.63 2e-06 3.8e-05
GO:0044419 biological process involved in interspecies interaction between organisms 11.43% (12/105) 2.52 1e-06 3.8e-05
GO:0043207 response to external biotic stimulus 11.43% (12/105) 2.52 1e-06 4e-05
GO:0051707 response to other organism 11.43% (12/105) 2.52 1e-06 4.3e-05
GO:0098542 defense response to other organism 11.43% (12/105) 2.52 1e-06 4.3e-05
GO:0006952 defense response 11.43% (12/105) 2.44 2e-06 4.4e-05
GO:0005886 plasma membrane 11.43% (12/105) 2.54 1e-06 4.5e-05
GO:0030554 adenyl nucleotide binding 20.95% (22/105) 1.67 1e-06 4.7e-05
GO:0009605 response to external stimulus 11.43% (12/105) 2.43 3e-06 4.7e-05
GO:0017076 purine nucleotide binding 20.95% (22/105) 1.59 3e-06 4.8e-05
GO:0005488 binding 43.81% (46/105) 0.96 1e-06 5.1e-05
GO:0003779 actin binding 4.76% (5/105) 4.45 4e-06 6.4e-05
GO:0000166 nucleotide binding 20.95% (22/105) 1.53 6e-06 8.8e-05
GO:1901265 nucleoside phosphate binding 20.95% (22/105) 1.53 6e-06 8.8e-05
GO:0097435 supramolecular fiber organization 4.76% (5/105) 4.32 6e-06 8.8e-05
GO:0004674 protein serine/threonine kinase activity 8.57% (9/105) 2.79 7e-06 0.0001
GO:0043168 anion binding 20.95% (22/105) 1.5 8e-06 0.000104
GO:1901363 heterocyclic compound binding 20.95% (22/105) 1.49 9e-06 0.000117
GO:0036094 small molecule binding 20.95% (22/105) 1.48 1e-05 0.000126
GO:0003674 molecular_function 56.19% (59/105) 0.67 1.1e-05 0.000132
GO:0016020 membrane 18.1% (19/105) 1.59 1.6e-05 0.000188
GO:0043167 ion binding 24.76% (26/105) 1.27 1.8e-05 0.000209
GO:0007165 signal transduction 8.57% (9/105) 2.58 2.2e-05 0.000249
GO:0006950 response to stress 13.33% (14/105) 1.89 2.5e-05 0.000275
GO:0034975 protein folding in endoplasmic reticulum 1.9% (2/105) 7.4 6.8e-05 0.000741
GO:0050896 response to stimulus 13.33% (14/105) 1.72 9e-05 0.000953
GO:0016772 transferase activity, transferring phosphorus-containing groups 13.33% (14/105) 1.66 0.000137 0.001414
GO:0008150 biological_process 44.76% (47/105) 0.69 0.000152 0.001531
GO:0016773 phosphotransferase activity, alcohol group as acceptor 11.43% (12/105) 1.69 0.000349 0.003419
GO:0001054 RNA polymerase I activity 1.9% (2/105) 6.2 0.000359 0.003442
GO:0005736 RNA polymerase I complex 1.9% (2/105) 6.13 0.000392 0.00367
GO:0008092 cytoskeletal protein binding 4.76% (5/105) 2.99 0.000447 0.004001
GO:0001056 RNA polymerase III activity 1.9% (2/105) 6.05 0.000441 0.004039
GO:0016301 kinase activity 11.43% (12/105) 1.63 0.000507 0.004445
GO:0005509 calcium ion binding 3.81% (4/105) 3.34 0.000699 0.006004
GO:0015031 protein transport 4.76% (5/105) 2.82 0.000778 0.006539
GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity 1.9% (2/105) 5.44 0.001011 0.008333
GO:0005666 RNA polymerase III complex 1.9% (2/105) 5.39 0.001089 0.008794
GO:0044877 protein-containing complex binding 4.76% (5/105) 2.7 0.001112 0.008809
GO:0016740 transferase activity 17.14% (18/105) 1.15 0.001159 0.008842
GO:0032991 protein-containing complex 12.38% (13/105) 1.42 0.001157 0.008995
GO:0006468 protein phosphorylation 9.52% (10/105) 1.63 0.001506 0.011282
GO:1902373 negative regulation of mRNA catabolic process 0.95% (1/105) 9.16 0.001746 0.01262
GO:0048255 mRNA stabilization 0.95% (1/105) 9.16 0.001746 0.01262
GO:0016409 palmitoyltransferase activity 1.9% (2/105) 5.02 0.001805 0.012822
GO:0016310 phosphorylation 9.52% (10/105) 1.59 0.001882 0.013143
GO:0004672 protein kinase activity 9.52% (10/105) 1.58 0.001945 0.013355
GO:0045184 establishment of protein localization 4.76% (5/105) 2.51 0.001979 0.013364
GO:0005515 protein binding 16.19% (17/105) 1.11 0.00206 0.01369
GO:0006886 intracellular protein transport 3.81% (4/105) 2.83 0.002569 0.0168
GO:0006796 phosphate-containing compound metabolic process 11.43% (12/105) 1.35 0.002664 0.01715
GO:0052742 phosphatidylinositol kinase activity 1.9% (2/105) 4.69 0.002803 0.017498
GO:0006793 phosphorus metabolic process 11.43% (12/105) 1.34 0.002792 0.017695
GO:0033036 macromolecule localization 4.76% (5/105) 2.35 0.003206 0.018347
GO:0022834 ligand-gated channel activity 1.9% (2/105) 4.6 0.003186 0.018488
GO:0015276 ligand-gated monoatomic ion channel activity 1.9% (2/105) 4.6 0.003186 0.018488
GO:0097159 organic cyclic compound binding 24.76% (26/105) 0.79 0.003309 0.018674
GO:0070727 cellular macromolecule localization 4.76% (5/105) 2.35 0.00318 0.018987
GO:0008104 protein localization 4.76% (5/105) 2.35 0.003149 0.019078
GO:0046854 phosphatidylinositol phosphate biosynthetic process 1.9% (2/105) 4.62 0.003121 0.019189
GO:0009987 cellular process 29.52% (31/105) 0.68 0.003836 0.021356
GO:1903312 negative regulation of mRNA metabolic process 0.95% (1/105) 7.73 0.004707 0.025517
GO:0071806 protein transmembrane transport 1.9% (2/105) 4.31 0.004691 0.025769
GO:0043953 protein transport by the Tat complex 0.95% (1/105) 7.62 0.005055 0.027047
GO:0010008 endosome membrane 1.9% (2/105) 4.21 0.005375 0.02839
GO:0030130 clathrin coat of trans-Golgi network vesicle 0.95% (1/105) 7.35 0.006098 0.031015
GO:0030132 clathrin coat of coated pit 0.95% (1/105) 7.35 0.006098 0.031015
GO:0036211 protein modification process 11.43% (12/105) 1.2 0.005995 0.031265
GO:0140096 catalytic activity, acting on a protein 12.38% (13/105) 1.13 0.006269 0.031499
GO:0071705 nitrogen compound transport 4.76% (5/105) 2.08 0.006864 0.032884
GO:0071439 clathrin complex 0.95% (1/105) 7.2 0.006792 0.032921
GO:0032051 clathrin light chain binding 0.95% (1/105) 7.2 0.006792 0.032921
GO:0005575 cellular_component 30.48% (32/105) 0.61 0.007026 0.033275
GO:0050794 regulation of cellular process 11.43% (12/105) 1.18 0.006724 0.033376
GO:0043489 RNA stabilization 0.95% (1/105) 7.06 0.007486 0.03427
GO:0001727 lipid kinase activity 1.9% (2/105) 3.97 0.007426 0.034378
GO:0110165 cellular anatomical entity 27.62% (29/105) 0.64 0.007657 0.034665
GO:0055029 nuclear DNA-directed RNA polymerase complex 1.9% (2/105) 3.97 0.007407 0.034678
GO:0012506 vesicle membrane 1.9% (2/105) 3.92 0.007941 0.03518
GO:0030659 cytoplasmic vesicle membrane 1.9% (2/105) 3.92 0.007941 0.03518
GO:0019538 protein metabolic process 13.33% (14/105) 1.04 0.008061 0.035333
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 1.9% (2/105) 3.89 0.008245 0.035758
GO:0000428 DNA-directed RNA polymerase complex 1.9% (2/105) 3.76 0.00982 0.04171
GO:0050789 regulation of biological process 11.43% (12/105) 1.11 0.009742 0.041808
GO:0034450 ubiquitin-ubiquitin ligase activity 0.95% (1/105) 6.6 0.010257 0.043123
GO:0005779 obsolete integral component of peroxisomal membrane 0.95% (1/105) 6.55 0.010603 0.044127
GO:0006661 phosphatidylinositol biosynthetic process 1.9% (2/105) 3.65 0.011352 0.04677
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (105) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms