Coexpression cluster: Cluster_435 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003678 DNA helicase activity 40.0% (2/5) 5.65 0.000624 0.00702
GO:0004386 helicase activity 40.0% (2/5) 5.24 0.001099 0.007066
GO:0042274 ribosomal small subunit biogenesis 20.0% (1/5) 9.63 0.001265 0.007117
GO:0140097 catalytic activity, acting on DNA 40.0% (2/5) 5.05 0.001427 0.007133
GO:0008094 ATP-dependent activity, acting on DNA 40.0% (2/5) 5.31 0.000988 0.007408
GO:0032200 telomere organization 40.0% (2/5) 5.72 0.000566 0.008495
GO:0000723 telomere maintenance 40.0% (2/5) 5.72 0.000566 0.008495
GO:0006974 DNA damage response 40.0% (2/5) 4.77 0.002097 0.00858
GO:0051276 chromosome organization 40.0% (2/5) 5.34 0.000954 0.008582
GO:0006996 organelle organization 40.0% (2/5) 4.59 0.00268 0.008615
GO:0051716 cellular response to stimulus 40.0% (2/5) 4.61 0.002585 0.008947
GO:0006281 DNA repair 40.0% (2/5) 4.79 0.002041 0.009184
GO:0033554 cellular response to stress 40.0% (2/5) 4.64 0.002476 0.009284
GO:0006259 DNA metabolic process 40.0% (2/5) 4.43 0.003314 0.009941
GO:0140657 ATP-dependent activity 40.0% (2/5) 4.16 0.004784 0.013454
GO:0140640 catalytic activity, acting on a nucleic acid 40.0% (2/5) 4.08 0.00536 0.014189
GO:0071840 cellular component organization or biogenesis 60.0% (3/5) 4.22 0.000316 0.014216
GO:0022613 ribonucleoprotein complex biogenesis 20.0% (1/5) 7.42 0.00581 0.014525
GO:0016043 cellular component organization 40.0% (2/5) 3.76 0.008164 0.019337
GO:0006950 response to stress 40.0% (2/5) 3.72 0.008648 0.019458
GO:0044085 cellular component biogenesis 20.0% (1/5) 6.18 0.013723 0.02807
GO:0050896 response to stimulus 40.0% (2/5) 3.41 0.013163 0.028206
GO:0090304 nucleic acid metabolic process 40.0% (2/5) 3.19 0.017531 0.034299
GO:0043170 macromolecule metabolic process 60.0% (3/5) 2.09 0.022595 0.042365
GO:0006139 nucleobase-containing compound metabolic process 40.0% (2/5) 2.88 0.026292 0.047326
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (5) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms