Coexpression cluster: Cluster_184 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0007018 microtubule-based movement 19.51% (16/82) 6.39 0.0 0.0
GO:0003777 microtubule motor activity 19.51% (16/82) 6.39 0.0 0.0
GO:0003774 cytoskeletal motor activity 19.51% (16/82) 6.08 0.0 0.0
GO:0008017 microtubule binding 21.95% (18/82) 5.54 0.0 0.0
GO:0015631 tubulin binding 21.95% (18/82) 5.42 0.0 0.0
GO:0008092 cytoskeletal protein binding 21.95% (18/82) 4.76 0.0 0.0
GO:0007017 microtubule-based process 19.51% (16/82) 5.17 0.0 0.0
GO:0005515 protein binding 43.9% (36/82) 1.96 0.0 0.0
GO:0140657 ATP-dependent activity 21.95% (18/82) 3.29 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 35.37% (29/82) 2.28 0.0 0.0
GO:0030554 adenyl nucleotide binding 35.37% (29/82) 2.19 0.0 0.0
GO:0032555 purine ribonucleotide binding 35.37% (29/82) 2.13 0.0 0.0
GO:0005524 ATP binding 32.93% (27/82) 2.24 0.0 0.0
GO:0032553 ribonucleotide binding 35.37% (29/82) 2.11 0.0 0.0
GO:0097367 carbohydrate derivative binding 35.37% (29/82) 2.1 0.0 0.0
GO:0017076 purine nucleotide binding 35.37% (29/82) 2.05 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 32.93% (27/82) 2.09 0.0 0.0
GO:0000166 nucleotide binding 35.37% (29/82) 1.98 0.0 0.0
GO:1901265 nucleoside phosphate binding 35.37% (29/82) 1.98 0.0 0.0
GO:0043168 anion binding 35.37% (29/82) 1.96 0.0 0.0
GO:1901363 heterocyclic compound binding 35.37% (29/82) 1.91 0.0 0.0
GO:0036094 small molecule binding 35.37% (29/82) 1.9 0.0 0.0
GO:0043167 ion binding 41.46% (34/82) 1.59 0.0 0.0
GO:0005488 binding 64.63% (53/82) 1.03 0.0 0.0
GO:0009987 cellular process 50.0% (41/82) 1.08 0.0 3e-06
GO:0003674 molecular_function 79.27% (65/82) 0.6 0.0 5e-06
GO:0097159 organic cyclic compound binding 41.46% (34/82) 1.12 2e-06 3e-05
GO:0008150 biological_process 60.98% (50/82) 0.72 1e-05 0.000122
GO:1903047 mitotic cell cycle process 3.66% (3/82) 5.29 6.4e-05 0.00076
GO:0009360 DNA polymerase III complex 2.44% (2/82) 7.33 6.4e-05 0.000784
GO:0010564 regulation of cell cycle process 3.66% (3/82) 5.1 9.3e-05 0.001078
GO:0032147 activation of protein kinase activity 2.44% (2/82) 6.91 0.000118 0.001283
GO:0005819 spindle 2.44% (2/82) 6.91 0.000118 0.001283
GO:0060236 regulation of mitotic spindle organization 2.44% (2/82) 6.59 0.00019 0.001834
GO:0090224 regulation of spindle organization 2.44% (2/82) 6.59 0.00019 0.001834
GO:0001934 positive regulation of protein phosphorylation 2.44% (2/82) 6.59 0.00019 0.001834
GO:0045860 positive regulation of protein kinase activity 2.44% (2/82) 6.59 0.00019 0.001834
GO:0051879 Hsp90 protein binding 2.44% (2/82) 6.33 0.000277 0.002612
GO:0010562 positive regulation of phosphorus metabolic process 2.44% (2/82) 6.21 0.000327 0.002789
GO:0042327 positive regulation of phosphorylation 2.44% (2/82) 6.21 0.000327 0.002789
GO:0045937 positive regulation of phosphate metabolic process 2.44% (2/82) 6.21 0.000327 0.002789
GO:0033674 positive regulation of kinase activity 2.44% (2/82) 6.21 0.000327 0.002789
GO:0099513 polymeric cytoskeletal fiber 3.66% (3/82) 4.39 0.000409 0.003053
GO:0099081 supramolecular polymer 3.66% (3/82) 4.39 0.000409 0.003053
GO:0005874 microtubule 3.66% (3/82) 4.39 0.000409 0.003053
GO:0099512 supramolecular fiber 3.66% (3/82) 4.39 0.000409 0.003053
GO:0070507 regulation of microtubule cytoskeleton organization 2.44% (2/82) 6.1 0.000381 0.003174
GO:0051726 regulation of cell cycle 3.66% (3/82) 4.41 0.000392 0.00319
GO:0099080 supramolecular complex 3.66% (3/82) 4.29 0.000503 0.003672
GO:0032886 regulation of microtubule-based process 2.44% (2/82) 5.82 0.000567 0.004063
GO:1902494 catalytic complex 7.32% (6/82) 2.51 0.000674 0.004732
GO:0031401 positive regulation of protein modification process 2.44% (2/82) 5.66 0.000712 0.004899
GO:0000159 protein phosphatase type 2A complex 2.44% (2/82) 5.45 0.000957 0.006347
GO:0051347 positive regulation of transferase activity 2.44% (2/82) 5.45 0.000957 0.006347
GO:0008287 protein serine/threonine phosphatase complex 2.44% (2/82) 5.39 0.001047 0.006694
GO:1903293 phosphatase complex 2.44% (2/82) 5.39 0.001047 0.006694
GO:0001932 regulation of protein phosphorylation 2.44% (2/82) 5.16 0.001445 0.008918
GO:0045859 regulation of protein kinase activity 2.44% (2/82) 5.16 0.001445 0.008918
GO:0051246 regulation of protein metabolic process 3.66% (3/82) 3.7 0.001628 0.009877
GO:0051247 positive regulation of protein metabolic process 2.44% (2/82) 5.05 0.001667 0.009945
GO:0042325 regulation of phosphorylation 2.44% (2/82) 5.01 0.001783 0.010134
GO:0043549 regulation of kinase activity 2.44% (2/82) 5.01 0.001783 0.010134
GO:0051493 regulation of cytoskeleton organization 2.44% (2/82) 5.01 0.001783 0.010134
GO:0003887 DNA-directed DNA polymerase activity 2.44% (2/82) 4.96 0.001904 0.01065
GO:0051304 chromosome separation 1.22% (1/82) 8.91 0.002076 0.010771
GO:0009904 chloroplast accumulation movement 1.22% (1/82) 8.91 0.002076 0.010771
GO:0004712 protein serine/threonine/tyrosine kinase activity 1.22% (1/82) 8.91 0.002076 0.010771
GO:0030544 Hsp70 protein binding 2.44% (2/82) 4.91 0.002028 0.011
GO:0034061 DNA polymerase activity 2.44% (2/82) 4.91 0.002028 0.011
GO:0042575 DNA polymerase complex 2.44% (2/82) 4.82 0.002288 0.011535
GO:0043085 positive regulation of catalytic activity 2.44% (2/82) 4.82 0.002288 0.011535
GO:0022402 cell cycle process 3.66% (3/82) 3.5 0.002443 0.011978
GO:0019888 protein phosphatase regulator activity 2.44% (2/82) 4.78 0.002423 0.012048
GO:0019208 phosphatase regulator activity 2.44% (2/82) 4.74 0.002562 0.012395
GO:0030120 vesicle coat 2.44% (2/82) 4.7 0.002705 0.012911
GO:0044093 positive regulation of molecular function 2.44% (2/82) 4.63 0.003001 0.014138
GO:0007165 signal transduction 6.1% (5/82) 2.31 0.003407 0.015841
GO:0051338 regulation of transferase activity 2.44% (2/82) 4.49 0.003638 0.016697
GO:0060548 obsolete negative regulation of cell death 1.22% (1/82) 7.91 0.004148 0.017891
GO:0019750 chloroplast localization 1.22% (1/82) 7.91 0.004148 0.017891
GO:0009902 chloroplast relocation 1.22% (1/82) 7.91 0.004148 0.017891
GO:0051644 plastid localization 1.22% (1/82) 7.91 0.004148 0.017891
GO:0051667 establishment of plastid localization 1.22% (1/82) 7.91 0.004148 0.017891
GO:0051174 regulation of phosphorus metabolic process 2.44% (2/82) 4.27 0.004889 0.020592
GO:0019220 regulation of phosphate metabolic process 2.44% (2/82) 4.27 0.004889 0.020592
GO:0031072 heat shock protein binding 2.44% (2/82) 4.24 0.005082 0.021154
GO:0033043 regulation of organelle organization 2.44% (2/82) 4.21 0.005278 0.021719
GO:0031399 regulation of protein modification process 2.44% (2/82) 4.1 0.006097 0.024804
GO:0031519 PcG protein complex 1.22% (1/82) 7.33 0.006215 0.025001
GO:0016579 protein deubiquitination 2.44% (2/82) 3.93 0.00766 0.03047
GO:0032991 protein-containing complex 10.98% (9/82) 1.36 0.008286 0.031559
GO:0007076 mitotic chromosome condensation 1.22% (1/82) 6.91 0.008279 0.031869
GO:0003953 NAD+ nucleosidase activity 1.22% (1/82) 6.91 0.008279 0.031869
GO:0051656 establishment of organelle localization 1.22% (1/82) 6.91 0.008279 0.031869
GO:0070646 protein modification by small protein removal 2.44% (2/82) 3.85 0.008626 0.032505
GO:0045184 establishment of protein localization 4.88% (4/82) 2.29 0.009261 0.034534
GO:0051087 protein-folding chaperone binding 2.44% (2/82) 3.78 0.009384 0.034633
GO:0051649 establishment of localization in cell 4.88% (4/82) 2.28 0.009503 0.034714
GO:0016075 rRNA catabolic process 1.22% (1/82) 6.59 0.010338 0.035586
GO:0051640 organelle localization 1.22% (1/82) 6.59 0.010338 0.035586
GO:0034661 ncRNA catabolic process 1.22% (1/82) 6.59 0.010338 0.035586
GO:0008104 protein localization 4.88% (4/82) 2.25 0.010084 0.035742
GO:0033036 macromolecule localization 4.88% (4/82) 2.25 0.010084 0.035742
GO:0070727 cellular macromolecule localization 4.88% (4/82) 2.25 0.010084 0.035742
GO:0050790 regulation of catalytic activity 2.44% (2/82) 3.66 0.010986 0.037102
GO:0004843 cysteine-type deubiquitinase activity 2.44% (2/82) 3.66 0.010986 0.037102
GO:0030117 membrane coat 2.44% (2/82) 3.57 0.012406 0.041507
GO:0065009 regulation of molecular function 2.44% (2/82) 3.54 0.012995 0.043076
GO:1990234 transferase complex 3.66% (3/82) 2.61 0.013341 0.043817
GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis 1.22% (1/82) 6.1 0.014443 0.044575
GO:1902410 mitotic cytokinetic process 1.22% (1/82) 6.1 0.014443 0.044575
GO:0000912 assembly of actomyosin apparatus involved in cytokinesis 1.22% (1/82) 6.1 0.014443 0.044575
GO:0000914 phragmoplast assembly 1.22% (1/82) 6.1 0.014443 0.044575
GO:0032506 cytokinetic process 1.22% (1/82) 6.1 0.014443 0.044575
GO:0061695 transferase complex, transferring phosphorus-containing groups 2.44% (2/82) 3.47 0.01421 0.045829
GO:0051128 regulation of cellular component organization 2.44% (2/82) 3.47 0.01421 0.045829
GO:0006886 intracellular protein transport 3.66% (3/82) 2.54 0.015049 0.046048
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (82) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms