Coexpression cluster: Cluster_1 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034062 5'-3' RNA polymerase activity 4.21% (4/95) 4.31 5.2e-05 0.00535
GO:0097747 RNA polymerase activity 4.21% (4/95) 4.31 5.2e-05 0.00535
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 4.21% (4/95) 4.51 3e-05 0.009239
GO:0042545 cell wall modification 3.16% (3/95) 4.76 0.00019 0.011654
GO:0030599 pectinesterase activity 3.16% (3/95) 4.76 0.00019 0.011654
GO:0016651 oxidoreductase activity, acting on NAD(P)H 3.16% (3/95) 4.11 0.000713 0.036471
GO:0071555 cell wall organization 3.16% (3/95) 3.76 0.00145 0.044505
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 2.11% (2/95) 4.79 0.002383 0.045726
GO:0003954 NADH dehydrogenase activity 2.11% (2/95) 4.79 0.002383 0.045726
GO:0052689 carboxylic ester hydrolase activity 3.16% (3/95) 3.57 0.002116 0.046397
GO:0006351 DNA-templated transcription 4.21% (4/95) 3.07 0.001366 0.046604
GO:0003824 catalytic activity 41.05% (39/95) 0.59 0.002594 0.046838
GO:0016779 nucleotidyltransferase activity 4.21% (4/95) 2.99 0.001694 0.047288
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 2.11% (2/95) 4.89 0.002077 0.049057
GO:0008137 NADH dehydrogenase (ubiquinone) activity 2.11% (2/95) 5.24 0.001281 0.049176
GO:0050136 NADH dehydrogenase (quinone) activity 2.11% (2/95) 5.24 0.001281 0.049176
GO:0045229 external encapsulating structure organization 3.16% (3/95) 3.61 0.001948 0.049837
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (95) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms