Coexpression cluster: Cluster_150 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009765 photosynthesis, light harvesting 16.0% (12/75) 7.63 0.0 0.0
GO:0015979 photosynthesis 17.33% (13/75) 6.65 0.0 0.0
GO:0009521 photosystem 13.33% (10/75) 6.43 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 17.33% (13/75) 4.78 0.0 0.0
GO:0009522 photosystem I 8.0% (6/75) 7.54 0.0 0.0
GO:0098796 membrane protein complex 14.67% (11/75) 3.93 0.0 0.0
GO:0016020 membrane 24.0% (18/75) 2.72 0.0 0.0
GO:0015995 chlorophyll biosynthetic process 5.33% (4/75) 7.58 0.0 0.0
GO:0005575 cellular_component 38.67% (29/75) 1.67 0.0 0.0
GO:0110165 cellular anatomical entity 32.0% (24/75) 1.88 0.0 0.0
GO:0015994 chlorophyll metabolic process 5.33% (4/75) 7.23 0.0 0.0
GO:0044237 cellular metabolic process 40.0% (30/75) 1.4 0.0 5e-06
GO:0046148 pigment biosynthetic process 5.33% (4/75) 6.18 0.0 7e-06
GO:0009654 photosystem II oxygen evolving complex 5.33% (4/75) 6.18 0.0 7e-06
GO:0006779 porphyrin-containing compound biosynthetic process 5.33% (4/75) 5.95 1e-06 1.2e-05
GO:0009538 photosystem I reaction center 4.0% (3/75) 7.3 1e-06 1.7e-05
GO:0009523 photosystem II 5.33% (4/75) 5.65 1e-06 2.5e-05
GO:0042440 pigment metabolic process 5.33% (4/75) 5.65 1e-06 2.5e-05
GO:0008152 metabolic process 46.67% (35/75) 1.1 1e-06 2.5e-05
GO:0033014 tetrapyrrole biosynthetic process 5.33% (4/75) 5.61 1e-06 2.6e-05
GO:0006778 porphyrin-containing compound metabolic process 5.33% (4/75) 5.49 2e-06 3.3e-05
GO:0048529 magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity 2.67% (2/75) 9.04 4e-06 5.6e-05
GO:0033013 tetrapyrrole metabolic process 5.33% (4/75) 5.23 4e-06 6.2e-05
GO:0019898 extrinsic component of membrane 4.0% (3/75) 6.23 9e-06 0.000124
GO:0009987 cellular process 46.67% (35/75) 0.98 1.1e-05 0.000156
GO:1990204 oxidoreductase complex 5.33% (4/75) 4.74 1.6e-05 0.000217
GO:0008150 biological_process 58.67% (44/75) 0.66 0.000118 0.001525
GO:0032991 protein-containing complex 14.67% (11/75) 1.78 0.000333 0.004146
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 2.67% (2/75) 4.91 0.002033 0.024461
GO:0051248 negative regulation of protein metabolic process 2.67% (2/75) 4.58 0.003196 0.037181
GO:0045550 geranylgeranyl reductase activity 1.33% (1/75) 8.04 0.003794 0.040126
GO:0010242 oxygen evolving activity 1.33% (1/75) 8.04 0.003794 0.040126
GO:0042549 photosystem II stabilization 1.33% (1/75) 8.04 0.003794 0.040126
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (75) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms