Coexpression cluster: Cluster_218 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006469 negative regulation of protein kinase activity 3.85% (2/52) 7.25 7.6e-05 0.006139
GO:0033673 negative regulation of kinase activity 3.85% (2/52) 7.25 7.6e-05 0.006139
GO:0042326 negative regulation of phosphorylation 3.85% (2/52) 7.25 7.6e-05 0.006139
GO:0071901 negative regulation of protein serine/threonine kinase activity 3.85% (2/52) 7.25 7.6e-05 0.006139
GO:0001933 negative regulation of protein phosphorylation 3.85% (2/52) 7.25 7.6e-05 0.006139
GO:0045936 negative regulation of phosphate metabolic process 3.85% (2/52) 6.98 0.000111 0.006421
GO:0010563 negative regulation of phosphorus metabolic process 3.85% (2/52) 6.98 0.000111 0.006421
GO:0043086 negative regulation of catalytic activity 3.85% (2/52) 6.48 0.000228 0.007686
GO:0000725 recombinational repair 3.85% (2/52) 6.48 0.000228 0.007686
GO:0051348 negative regulation of transferase activity 3.85% (2/52) 6.76 0.000153 0.007733
GO:0000724 double-strand break repair via homologous recombination 3.85% (2/52) 6.57 0.000202 0.008145
GO:0031400 negative regulation of protein modification process 3.85% (2/52) 6.57 0.000202 0.008145
GO:0044092 negative regulation of molecular function 3.85% (2/52) 6.32 0.000287 0.008269
GO:0071900 regulation of protein serine/threonine kinase activity 3.85% (2/52) 6.32 0.000287 0.008269
GO:0045859 regulation of protein kinase activity 3.85% (2/52) 5.81 0.000584 0.013884
GO:0001932 regulation of protein phosphorylation 3.85% (2/52) 5.81 0.000584 0.013884
GO:0006302 double-strand break repair 3.85% (2/52) 5.87 0.000541 0.014582
GO:0043549 regulation of kinase activity 3.85% (2/52) 5.66 0.000722 0.015357
GO:0042325 regulation of phosphorylation 3.85% (2/52) 5.66 0.000722 0.015357
GO:0008173 RNA methyltransferase activity 3.85% (2/52) 5.21 0.001349 0.023693
GO:0000256 allantoin catabolic process 1.92% (1/52) 9.57 0.001317 0.024176
GO:0000255 allantoin metabolic process 1.92% (1/52) 9.57 0.001317 0.024176
GO:0004038 allantoinase activity 1.92% (1/52) 9.57 0.001317 0.024176
GO:0051338 regulation of transferase activity 3.85% (2/52) 5.14 0.001483 0.024962
GO:0051248 negative regulation of protein metabolic process 3.85% (2/52) 5.11 0.001552 0.025084
GO:0034470 ncRNA processing 5.77% (3/52) 3.65 0.001773 0.027556
GO:0033549 MAP kinase phosphatase activity 1.92% (1/52) 8.57 0.002631 0.027975
GO:0043408 regulation of MAPK cascade 1.92% (1/52) 8.57 0.002631 0.027975
GO:0043409 negative regulation of MAPK cascade 1.92% (1/52) 8.57 0.002631 0.027975
GO:0043405 regulation of MAP kinase activity 1.92% (1/52) 8.57 0.002631 0.027975
GO:0050897 cobalt ion binding 1.92% (1/52) 8.57 0.002631 0.027975
GO:0043605 amide catabolic process 1.92% (1/52) 8.57 0.002631 0.027975
GO:0043407 negative regulation of MAP kinase activity 1.92% (1/52) 8.57 0.002631 0.027975
GO:0051174 regulation of phosphorus metabolic process 3.85% (2/52) 4.93 0.002 0.028855
GO:0019220 regulation of phosphate metabolic process 3.85% (2/52) 4.93 0.002 0.028855
GO:0004650 polygalacturonase activity 3.85% (2/52) 4.79 0.002414 0.032511
GO:0031399 regulation of protein modification process 3.85% (2/52) 4.76 0.002501 0.0326
GO:0044248 cellular catabolic process 7.69% (4/52) 2.84 0.00234 0.032601
GO:0005762 mitochondrial large ribosomal subunit 1.92% (1/52) 7.98 0.003944 0.037942
GO:0000315 organellar large ribosomal subunit 1.92% (1/52) 7.98 0.003944 0.037942
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 1.92% (1/52) 7.98 0.003944 0.037942
GO:0016209 antioxidant activity 5.77% (3/52) 3.25 0.003886 0.040254
GO:0015934 large ribosomal subunit 3.85% (2/52) 4.36 0.004322 0.040602
GO:0050790 regulation of catalytic activity 3.85% (2/52) 4.32 0.004552 0.041798
GO:0065009 regulation of molecular function 3.85% (2/52) 4.19 0.005404 0.047459
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.85% (2/52) 4.19 0.005404 0.047459
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (52) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms