Coexpression cluster: Cluster_114 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019219 regulation of nucleobase-containing compound metabolic process 15.6% (17/109) 1.82 6e-06 0.000504
GO:0009889 regulation of biosynthetic process 15.6% (17/109) 1.71 1.6e-05 0.000539
GO:0031326 regulation of cellular biosynthetic process 15.6% (17/109) 1.71 1.6e-05 0.000539
GO:0051252 regulation of RNA metabolic process 15.6% (17/109) 1.83 5e-06 0.000591
GO:0010556 regulation of macromolecule biosynthetic process 15.6% (17/109) 1.71 1.6e-05 0.000664
GO:0010468 regulation of gene expression 15.6% (17/109) 1.71 1.6e-05 0.000739
GO:0080090 regulation of primary metabolic process 15.6% (17/109) 1.72 1.4e-05 0.000767
GO:0060255 regulation of macromolecule metabolic process 15.6% (17/109) 1.64 2.9e-05 0.0008
GO:0031323 regulation of cellular metabolic process 15.6% (17/109) 1.65 2.8e-05 0.000829
GO:2001141 regulation of RNA biosynthetic process 15.6% (17/109) 1.84 5e-06 0.000834
GO:0006355 regulation of DNA-templated transcription 15.6% (17/109) 1.84 5e-06 0.000834
GO:0019222 regulation of metabolic process 15.6% (17/109) 1.62 3.4e-05 0.000849
GO:0051171 regulation of nitrogen compound metabolic process 15.6% (17/109) 1.73 1.4e-05 0.000883
GO:0005992 trehalose biosynthetic process 2.75% (3/109) 4.84 0.000161 0.003754
GO:0005991 trehalose metabolic process 2.75% (3/109) 4.8 0.000174 0.003788
GO:0032502 developmental process 4.59% (5/109) 3.03 0.00039 0.00708
GO:0009312 oligosaccharide biosynthetic process 2.75% (3/109) 4.41 0.000387 0.007436
GO:0046351 disaccharide biosynthetic process 2.75% (3/109) 4.44 0.000365 0.007451
GO:0010158 abaxial cell fate specification 1.83% (2/109) 5.8 0.000577 0.009434
GO:0001708 cell fate specification 1.83% (2/109) 5.8 0.000577 0.009434
GO:0050794 regulation of cellular process 15.6% (17/109) 1.27 0.000608 0.009471
GO:0004805 trehalose-phosphatase activity 1.83% (2/109) 5.69 0.000672 0.009988
GO:0005984 disaccharide metabolic process 2.75% (3/109) 3.96 0.000978 0.013908
GO:0003677 DNA binding 12.84% (14/109) 1.36 0.001086 0.014207
GO:0009311 oligosaccharide metabolic process 2.75% (3/109) 3.92 0.001062 0.014464
GO:0016051 carbohydrate biosynthetic process 3.67% (4/109) 3.09 0.001297 0.014622
GO:0050789 regulation of biological process 15.6% (17/109) 1.19 0.001164 0.014639
GO:0042578 phosphoric ester hydrolase activity 5.5% (6/109) 2.35 0.001223 0.014818
GO:0005488 binding 45.87% (50/109) 0.54 0.001296 0.01513
GO:0005634 nucleus 6.42% (7/109) 2.07 0.001482 0.016157
GO:0043231 intracellular membrane-bounded organelle 7.34% (8/109) 1.87 0.001633 0.016186
GO:0043227 membrane-bounded organelle 7.34% (8/109) 1.87 0.001633 0.016186
GO:0065007 biological regulation 15.6% (17/109) 1.15 0.001546 0.016307
GO:0016787 hydrolase activity 17.43% (19/109) 1.05 0.001803 0.017343
GO:0003700 DNA-binding transcription factor activity 9.17% (10/109) 1.57 0.002066 0.0193
GO:0019203 carbohydrate phosphatase activity 1.83% (2/109) 4.86 0.002172 0.019727
GO:0047641 aldose-6-phosphate reductase (NADPH) activity 0.92% (1/109) 8.5 0.00276 0.024389
GO:0005975 carbohydrate metabolic process 7.34% (8/109) 1.73 0.002932 0.025229
GO:0048869 cellular developmental process 1.83% (2/109) 4.55 0.00333 0.025927
GO:0005200 structural constituent of cytoskeleton 1.83% (2/109) 4.55 0.00333 0.025927
GO:0003779 actin binding 2.75% (3/109) 3.34 0.003295 0.026934
GO:0140110 transcription regulator activity 9.17% (10/109) 1.48 0.00322 0.026998
GO:0016788 hydrolase activity, acting on ester bonds 7.34% (8/109) 1.67 0.003766 0.028641
GO:0003674 molecular_function 65.14% (71/109) 0.32 0.004236 0.030782
GO:0016791 phosphatase activity 4.59% (5/109) 2.25 0.004145 0.030802
GO:0003998 acylphosphatase activity 0.92% (1/109) 7.5 0.005512 0.037549
GO:0008934 inositol monophosphate 1-phosphatase activity 0.92% (1/109) 7.5 0.005512 0.037549
GO:0052834 inositol monophosphate phosphatase activity 0.92% (1/109) 7.5 0.005512 0.037549
GO:0097159 organic cyclic compound binding 29.36% (32/109) 0.63 0.005982 0.039923
GO:0004348 glucosylceramidase activity 0.92% (1/109) 6.92 0.008256 0.046548
GO:0006677 glycosylceramide metabolic process 0.92% (1/109) 6.92 0.008256 0.046548
GO:0006680 glucosylceramide catabolic process 0.92% (1/109) 6.92 0.008256 0.046548
GO:0046479 glycosphingolipid catabolic process 0.92% (1/109) 6.92 0.008256 0.046548
GO:0046477 glycosylceramide catabolic process 0.92% (1/109) 6.92 0.008256 0.046548
GO:0019377 glycolipid catabolic process 0.92% (1/109) 6.92 0.008256 0.046548
GO:0006687 glycosphingolipid metabolic process 0.92% (1/109) 6.92 0.008256 0.046548
GO:0006678 glucosylceramide metabolic process 0.92% (1/109) 6.92 0.008256 0.046548
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (109) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms