Coexpression cluster: Cluster_2 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000723 telomere maintenance 11.02% (14/127) 3.86 0.0 0.0
GO:0032200 telomere organization 11.02% (14/127) 3.86 0.0 0.0
GO:0003678 DNA helicase activity 11.02% (14/127) 3.79 0.0 0.0
GO:0051276 chromosome organization 11.02% (14/127) 3.48 0.0 0.0
GO:0008094 ATP-dependent activity, acting on DNA 11.02% (14/127) 3.46 0.0 0.0
GO:0004386 helicase activity 11.02% (14/127) 3.38 0.0 0.0
GO:0006281 DNA repair 11.81% (15/127) 3.03 0.0 0.0
GO:0140097 catalytic activity, acting on DNA 11.02% (14/127) 3.19 0.0 0.0
GO:0006974 DNA damage response 11.81% (15/127) 3.01 0.0 0.0
GO:0033554 cellular response to stress 11.81% (15/127) 2.88 0.0 0.0
GO:0051716 cellular response to stimulus 11.81% (15/127) 2.85 0.0 0.0
GO:0006259 DNA metabolic process 11.81% (15/127) 2.67 0.0 0.0
GO:0006996 organelle organization 11.02% (14/127) 2.73 0.0 1e-06
GO:0140640 catalytic activity, acting on a nucleic acid 12.6% (16/127) 2.41 0.0 1e-06
GO:0071840 cellular component organization or biogenesis 13.39% (17/127) 2.06 1e-06 1.5e-05
GO:0016043 cellular component organization 12.6% (16/127) 2.1 1e-06 2e-05
GO:0140657 ATP-dependent activity 11.02% (14/127) 2.3 1e-06 2.1e-05
GO:0006950 response to stress 12.6% (16/127) 2.05 2e-06 2.8e-05
GO:0090304 nucleic acid metabolic process 14.17% (18/127) 1.7 1.1e-05 0.000183
GO:0050896 response to stimulus 12.6% (16/127) 1.74 2.4e-05 0.000382
GO:0006139 nucleobase-containing compound metabolic process 14.96% (19/127) 1.47 5.5e-05 0.000788
GO:0046483 heterocycle metabolic process 15.75% (20/127) 1.42 5.4e-05 0.000808
GO:0006725 cellular aromatic compound metabolic process 15.75% (20/127) 1.4 6.3e-05 0.000855
GO:1901360 organic cyclic compound metabolic process 14.96% (19/127) 1.3 0.000241 0.003146
GO:0003824 catalytic activity 40.16% (51/127) 0.56 0.001148 0.01437
GO:0034641 cellular nitrogen compound metabolic process 14.96% (19/127) 1.04 0.002083 0.025072
GO:0006508 proteolysis 7.09% (9/127) 1.55 0.003895 0.045157
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (127) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms