Coexpression cluster: Cluster_648 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004478 methionine adenosyltransferase activity 6.25% (6/96) 9.95 0.0 0.0
GO:0006556 S-adenosylmethionine biosynthetic process 6.25% (6/96) 9.7 0.0 0.0
GO:0046500 S-adenosylmethionine metabolic process 6.25% (6/96) 9.36 0.0 0.0
GO:0009436 glyoxylate catabolic process 4.17% (4/96) 9.19 0.0 0.0
GO:0009080 pyruvate family amino acid catabolic process 4.17% (4/96) 9.19 0.0 0.0
GO:0009078 pyruvate family amino acid metabolic process 4.17% (4/96) 9.19 0.0 0.0
GO:0042853 L-alanine catabolic process 4.17% (4/96) 9.19 0.0 0.0
GO:0019481 L-alanine catabolic process, by transamination 4.17% (4/96) 9.19 0.0 0.0
GO:0006524 alanine catabolic process 4.17% (4/96) 9.19 0.0 0.0
GO:0042851 L-alanine metabolic process 4.17% (4/96) 9.19 0.0 0.0
GO:0006522 alanine metabolic process 4.17% (4/96) 9.19 0.0 0.0
GO:0046487 glyoxylate metabolic process 4.17% (4/96) 8.8 0.0 0.0
GO:0008453 alanine-glyoxylate transaminase activity 4.17% (4/96) 8.09 0.0 0.0
GO:1901606 alpha-amino acid catabolic process 6.25% (6/96) 5.6 0.0 0.0
GO:0009063 amino acid catabolic process 6.25% (6/96) 5.5 0.0 0.0
GO:0044272 sulfur compound biosynthetic process 6.25% (6/96) 5.25 0.0 0.0
GO:0046185 aldehyde catabolic process 4.17% (4/96) 6.86 0.0 1e-06
GO:0044282 small molecule catabolic process 7.29% (7/96) 4.3 0.0 1e-06
GO:1901605 alpha-amino acid metabolic process 7.29% (7/96) 4.15 0.0 3e-06
GO:0016054 organic acid catabolic process 6.25% (6/96) 4.55 0.0 4e-06
GO:0046395 carboxylic acid catabolic process 6.25% (6/96) 4.55 0.0 4e-06
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 6.25% (6/96) 4.38 1e-06 7e-06
GO:0006790 sulfur compound metabolic process 6.25% (6/96) 4.17 1e-06 1.6e-05
GO:0006081 cellular aldehyde metabolic process 4.17% (4/96) 5.56 2e-06 2.3e-05
GO:0016841 ammonia-lyase activity 3.12% (3/96) 6.97 2e-06 2.5e-05
GO:0016769 transferase activity, transferring nitrogenous groups 4.17% (4/96) 5.39 3e-06 3.2e-05
GO:0008483 transaminase activity 4.17% (4/96) 5.39 3e-06 3.2e-05
GO:0072329 monocarboxylic acid catabolic process 4.17% (4/96) 5.31 4e-06 4e-05
GO:0006520 amino acid metabolic process 7.29% (7/96) 3.24 1.1e-05 0.000108
GO:0140647 P450-containing electron transport chain 2.08% (2/96) 8.57 1.3e-05 0.000131
GO:0016840 carbon-nitrogen lyase activity 3.12% (3/96) 5.84 2.2e-05 0.000212
GO:0019842 vitamin binding 4.17% (4/96) 4.58 2.7e-05 0.000248
GO:0043621 protein self-association 2.08% (2/96) 7.78 4e-05 0.000359
GO:0009651 response to salt stress 2.08% (2/96) 7.4 6.8e-05 0.000589
GO:0007165 signal transduction 8.33% (8/96) 2.54 7.5e-05 0.000638
GO:0006082 organic acid metabolic process 8.33% (8/96) 2.51 8.8e-05 0.000666
GO:0005739 mitochondrion 6.25% (6/96) 3.09 8.2e-05 0.000674
GO:0043436 oxoacid metabolic process 8.33% (8/96) 2.51 8.7e-05 0.00068
GO:0019752 carboxylic acid metabolic process 8.33% (8/96) 2.52 8.6e-05 0.000685
GO:0006970 response to osmotic stress 2.08% (2/96) 7.14 9.8e-05 0.000725
GO:1901565 organonitrogen compound catabolic process 6.25% (6/96) 3.02 0.000105 0.000742
GO:0051259 protein complex oligomerization 2.08% (2/96) 7.09 0.000105 0.000756
GO:0009055 electron transfer activity 3.12% (3/96) 4.9 0.000152 0.001049
GO:0042542 response to hydrogen peroxide 2.08% (2/96) 6.77 0.000164 0.001101
GO:0042910 xenobiotic transmembrane transporter activity 3.12% (3/96) 4.85 0.000169 0.001113
GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane 2.08% (2/96) 6.68 0.000184 0.001135
GO:0042908 xenobiotic transport 2.08% (2/96) 6.68 0.000184 0.001135
GO:0046618 xenobiotic export from cell 2.08% (2/96) 6.68 0.000184 0.001135
GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process 2.08% (2/96) 6.54 0.000225 0.001334
GO:0006559 L-phenylalanine catabolic process 2.08% (2/96) 6.54 0.000225 0.001334
GO:0140115 export across plasma membrane 2.08% (2/96) 6.39 0.000274 0.001561
GO:1901575 organic substance catabolic process 8.33% (8/96) 2.27 0.00027 0.001565
GO:0032787 monocarboxylic acid metabolic process 5.21% (5/96) 3.13 0.00029 0.00162
GO:0006558 L-phenylalanine metabolic process 2.08% (2/96) 6.2 0.000356 0.001819
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 2.08% (2/96) 6.2 0.000356 0.001819
GO:0030170 pyridoxal phosphate binding 3.12% (3/96) 4.48 0.000352 0.001859
GO:0070279 vitamin B6 binding 3.12% (3/96) 4.48 0.000352 0.001859
GO:0009056 catabolic process 8.33% (8/96) 2.2 0.000375 0.001882
GO:0009987 cellular process 33.33% (32/96) 0.86 0.00035 0.001919
GO:0046658 obsolete anchored component of plasma membrane 3.12% (3/96) 4.4 0.000419 0.002066
GO:0044281 small molecule metabolic process 9.38% (9/96) 1.98 0.000486 0.00232
GO:0044248 cellular catabolic process 6.25% (6/96) 2.61 0.00048 0.002329
GO:0000302 response to reactive oxygen species 2.08% (2/96) 5.61 0.000809 0.003801
GO:0051537 2 iron, 2 sulfur cluster binding 2.08% (2/96) 5.53 0.000898 0.004155
GO:0009074 aromatic amino acid family catabolic process 2.08% (2/96) 5.13 0.001547 0.007043
GO:0110165 cellular anatomical entity 30.21% (29/96) 0.77 0.001862 0.008351
GO:0015297 antiporter activity 3.12% (3/96) 3.54 0.002294 0.010135
GO:0044249 cellular biosynthetic process 9.38% (9/96) 1.64 0.002505 0.010906
GO:0005829 cytosol 6.25% (6/96) 2.14 0.002546 0.01092
GO:0005542 folic acid binding 1.04% (1/96) 8.52 0.002712 0.011469
GO:0016740 transferase activity 16.67% (16/96) 1.1 0.002845 0.011861
GO:0008171 O-methyltransferase activity 2.08% (2/96) 4.63 0.003062 0.012588
GO:0009408 response to heat 2.08% (2/96) 4.54 0.003438 0.01394
GO:0072341 modified amino acid binding 1.04% (1/96) 7.86 0.004304 0.017218
GO:0010035 response to inorganic substance 2.08% (2/96) 4.31 0.004673 0.018202
GO:0015291 secondary active transmembrane transporter activity 3.12% (3/96) 3.18 0.004613 0.018208
GO:0009266 response to temperature stimulus 2.08% (2/96) 4.25 0.005084 0.019545
GO:0022900 electron transport chain 2.08% (2/96) 4.22 0.005311 0.0199
GO:0006007 glucose catabolic process 1.04% (1/96) 7.57 0.005259 0.019955
GO:0003824 catalytic activity 29.17% (28/96) 0.69 0.005416 0.020041
GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity 1.04% (1/96) 7.36 0.006053 0.021329
GO:0004619 phosphoglycerate mutase activity 1.04% (1/96) 7.36 0.006053 0.021329
GO:0009058 biosynthetic process 9.38% (9/96) 1.44 0.006044 0.021819
GO:0010033 response to organic substance 3.12% (3/96) 3.04 0.006031 0.022041
GO:0009072 aromatic amino acid metabolic process 2.08% (2/96) 4.01 0.007008 0.02412
GO:0003333 amino acid transmembrane transport 2.08% (2/96) 4.02 0.006956 0.024223
GO:0044262 obsolete cellular carbohydrate metabolic process 1.04% (1/96) 7.12 0.007164 0.024374
GO:0051540 metal cluster binding 2.08% (2/96) 3.96 0.007483 0.024889
GO:0051536 iron-sulfur cluster binding 2.08% (2/96) 3.96 0.007483 0.024889
GO:0008150 biological_process 39.58% (38/96) 0.51 0.008395 0.02761
GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity 1.04% (1/96) 6.78 0.009066 0.029168
GO:0051082 unfolded protein binding 2.08% (2/96) 3.8 0.009249 0.029438
GO:0050794 regulation of cellular process 11.46% (11/96) 1.18 0.009055 0.029453
GO:1905039 carboxylic acid transmembrane transport 2.08% (2/96) 3.78 0.009586 0.029869
GO:1903825 organic acid transmembrane transport 2.08% (2/96) 3.78 0.009586 0.029869
GO:1901700 response to oxygen-containing compound 2.08% (2/96) 3.72 0.010256 0.031624
GO:0005575 cellular_component 30.21% (29/96) 0.6 0.011284 0.034433
GO:0140352 export from cell 2.08% (2/96) 3.63 0.01157 0.034946
GO:0042221 response to chemical 3.12% (3/96) 2.67 0.011937 0.035689
GO:0050789 regulation of biological process 11.46% (11/96) 1.11 0.012751 0.037743
GO:0003674 molecular_function 46.88% (45/96) 0.41 0.013175 0.038233
GO:0015171 amino acid transmembrane transporter activity 2.08% (2/96) 3.54 0.013068 0.038298
GO:0006865 amino acid transport 2.08% (2/96) 3.52 0.013391 0.038483
GO:1901576 organic substance biosynthetic process 8.33% (8/96) 1.35 0.013731 0.039081
GO:0016829 lyase activity 3.12% (3/96) 2.57 0.01448 0.040819
GO:0046943 carboxylic acid transmembrane transporter activity 2.08% (2/96) 3.42 0.015205 0.042062
GO:0005342 organic acid transmembrane transporter activity 2.08% (2/96) 3.42 0.015205 0.042062
GO:0006526 arginine biosynthetic process 1.04% (1/96) 5.95 0.016008 0.043874
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (96) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms