Coexpression cluster: Cluster_257 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005840 ribosome 34.38% (22/64) 4.66 0.0 0.0
GO:0003735 structural constituent of ribosome 34.38% (22/64) 4.55 0.0 0.0
GO:0043043 peptide biosynthetic process 34.38% (22/64) 4.55 0.0 0.0
GO:0006412 translation 34.38% (22/64) 4.59 0.0 0.0
GO:0043604 amide biosynthetic process 34.38% (22/64) 4.46 0.0 0.0
GO:0006518 peptide metabolic process 34.38% (22/64) 4.47 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 34.38% (22/64) 4.34 0.0 0.0
GO:0043228 non-membrane-bounded organelle 34.38% (22/64) 4.34 0.0 0.0
GO:0043603 amide metabolic process 34.38% (22/64) 4.33 0.0 0.0
GO:0005198 structural molecule activity 34.38% (22/64) 4.3 0.0 0.0
GO:0009059 macromolecule biosynthetic process 34.38% (22/64) 3.73 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 34.38% (22/64) 3.65 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 34.38% (22/64) 3.48 0.0 0.0
GO:0043229 intracellular organelle 34.38% (22/64) 3.22 0.0 0.0
GO:0043226 organelle 34.38% (22/64) 3.22 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 42.19% (27/64) 2.54 0.0 0.0
GO:0110165 cellular anatomical entity 45.31% (29/64) 2.38 0.0 0.0
GO:0005575 cellular_component 51.56% (33/64) 2.08 0.0 0.0
GO:0044249 cellular biosynthetic process 34.38% (22/64) 2.88 0.0 0.0
GO:1901576 organic substance biosynthetic process 34.38% (22/64) 2.76 0.0 0.0
GO:0009058 biosynthetic process 34.38% (22/64) 2.67 0.0 0.0
GO:0019538 protein metabolic process 37.5% (24/64) 1.99 0.0 0.0
GO:0043170 macromolecule metabolic process 45.31% (29/64) 1.68 0.0 0.0
GO:0006807 nitrogen compound metabolic process 46.88% (30/64) 1.55 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 39.06% (25/64) 1.72 0.0 0.0
GO:0044237 cellular metabolic process 42.19% (27/64) 1.48 0.0 2e-06
GO:0015935 small ribosomal subunit 6.25% (4/64) 5.88 1e-06 6e-06
GO:0009987 cellular process 51.56% (33/64) 1.12 1e-06 1.2e-05
GO:0044391 ribosomal subunit 7.81% (5/64) 4.73 1e-06 1.2e-05
GO:0044238 primary metabolic process 45.31% (29/64) 1.25 1e-06 1.2e-05
GO:0071704 organic substance metabolic process 46.88% (30/64) 1.2 2e-06 1.5e-05
GO:1990904 ribonucleoprotein complex 9.38% (6/64) 3.92 3e-06 2.4e-05
GO:0008152 metabolic process 46.88% (30/64) 1.11 7e-06 5.6e-05
GO:0032991 protein-containing complex 17.19% (11/64) 2.01 7.8e-05 0.000588
GO:0008150 biological_process 60.94% (39/64) 0.72 9.1e-05 0.000667
GO:0140318 protein transporter activity 3.12% (2/64) 6.95 0.000115 0.000783
GO:0022884 macromolecule transmembrane transporter activity 3.12% (2/64) 6.95 0.000115 0.000783
GO:0008320 protein transmembrane transporter activity 3.12% (2/64) 6.95 0.000115 0.000783
GO:0003674 molecular_function 71.88% (46/64) 0.46 0.001038 0.006867
GO:0003723 RNA binding 10.94% (7/64) 2.08 0.001303 0.008407
GO:0019136 deoxynucleoside kinase activity 1.56% (1/64) 9.27 0.00162 0.00929
GO:0008479 tRNA-guanosine(34) queuine transglycosylase activity 1.56% (1/64) 9.27 0.00162 0.00929
GO:0004797 thymidine kinase activity 1.56% (1/64) 9.27 0.00162 0.00929
GO:0003676 nucleic acid binding 21.88% (14/64) 1.27 0.001523 0.009585
GO:0005852 eukaryotic translation initiation factor 3 complex 3.12% (2/64) 5.1 0.001571 0.009653
GO:0006400 tRNA modification 3.12% (2/64) 4.63 0.003011 0.016889
GO:0031415 NatA complex 1.56% (1/64) 8.27 0.003238 0.017049
GO:0009451 RNA modification 4.69% (3/64) 3.37 0.003113 0.017088
GO:0034470 ncRNA processing 4.69% (3/64) 3.35 0.003212 0.017263
GO:0008033 tRNA processing 3.12% (2/64) 4.06 0.006476 0.03276
GO:0019206 nucleoside kinase activity 1.56% (1/64) 7.27 0.006466 0.033364
GO:0003743 translation initiation factor activity 3.12% (2/64) 3.89 0.008083 0.037917
GO:0031414 N-terminal protein acetyltransferase complex 1.56% (1/64) 6.95 0.008076 0.038585
GO:0006474 N-terminal protein amino acid acetylation 1.56% (1/64) 6.95 0.008076 0.038585
GO:0004596 peptide alpha-N-acetyltransferase activity 1.56% (1/64) 6.95 0.008076 0.038585
GO:0034660 ncRNA metabolic process 4.69% (3/64) 2.74 0.010375 0.047799
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (64) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms