Coexpression cluster: Cluster_97 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009521 photosystem 2.82% (5/177) 4.19 8e-06 0.003714
GO:0019219 regulation of nucleobase-containing compound metabolic process 11.3% (20/177) 1.35 0.000123 0.006874
GO:0051252 regulation of RNA metabolic process 11.3% (20/177) 1.36 0.000108 0.006895
GO:2001141 regulation of RNA biosynthetic process 11.3% (20/177) 1.37 0.000101 0.00756
GO:0006355 regulation of DNA-templated transcription 11.3% (20/177) 1.37 0.000101 0.00756
GO:0009889 regulation of biosynthetic process 11.3% (20/177) 1.24 0.000331 0.0078
GO:0031326 regulation of cellular biosynthetic process 11.3% (20/177) 1.24 0.000331 0.0078
GO:0007166 cell surface receptor signaling pathway 2.26% (4/177) 3.59 0.000351 0.007866
GO:0010556 regulation of macromolecule biosynthetic process 11.3% (20/177) 1.24 0.000326 0.008601
GO:0010468 regulation of gene expression 11.3% (20/177) 1.25 0.000318 0.008893
GO:0019222 regulation of metabolic process 11.86% (21/177) 1.23 0.000259 0.008925
GO:0065007 biological regulation 14.69% (26/177) 1.07 0.000282 0.009011
GO:0060255 regulation of macromolecule metabolic process 11.86% (21/177) 1.25 0.000223 0.009092
GO:0050789 regulation of biological process 14.69% (26/177) 1.1 0.000187 0.009309
GO:0098542 defense response to other organism 2.26% (4/177) 3.63 0.000316 0.009443
GO:0031323 regulation of cellular metabolic process 11.86% (21/177) 1.25 0.000211 0.00947
GO:0015979 photosynthesis 2.26% (4/177) 3.71 0.000254 0.009475
GO:0080090 regulation of primary metabolic process 11.86% (21/177) 1.33 0.000101 0.01134
GO:0030247 polysaccharide binding 2.26% (4/177) 3.41 0.000569 0.012134
GO:0009607 response to biotic stimulus 2.26% (4/177) 3.23 0.000903 0.014452
GO:0044419 biological process involved in interspecies interaction between organisms 2.26% (4/177) 3.23 0.000903 0.014452
GO:0051171 regulation of nitrogen compound metabolic process 11.86% (21/177) 1.33 9.7e-05 0.014457
GO:0009605 response to external stimulus 2.82% (5/177) 2.83 0.000735 0.014968
GO:0009523 photosystem II 1.69% (3/177) 3.99 0.000893 0.01539
GO:0043207 response to external biotic stimulus 2.26% (4/177) 3.26 0.000834 0.015572
GO:0051707 response to other organism 2.26% (4/177) 3.26 0.000834 0.015572
GO:0009538 photosystem I reaction center 1.13% (2/177) 5.48 0.000878 0.015727
GO:0050794 regulation of cellular process 14.69% (26/177) 1.19 7.3e-05 0.01636
GO:0009522 photosystem I 1.13% (2/177) 4.71 0.002598 0.040137
GO:0046906 tetrapyrrole binding 4.52% (8/177) 1.7 0.00349 0.048859
GO:0020037 heme binding 4.52% (8/177) 1.71 0.003303 0.049328
GO:0003677 DNA binding 10.17% (18/177) 1.02 0.003458 0.049975
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (177) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms