Coexpression cluster: Cluster_242 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019219 regulation of nucleobase-containing compound metabolic process 21.52% (17/79) 2.28 0.0 1e-06
GO:0019222 regulation of metabolic process 22.78% (18/79) 2.17 0.0 1e-06
GO:0060255 regulation of macromolecule metabolic process 22.78% (18/79) 2.19 0.0 2e-06
GO:0031323 regulation of cellular metabolic process 22.78% (18/79) 2.19 0.0 2e-06
GO:0051252 regulation of RNA metabolic process 21.52% (17/79) 2.29 0.0 2e-06
GO:0031326 regulation of cellular biosynthetic process 22.78% (18/79) 2.25 0.0 2e-06
GO:0009889 regulation of biosynthetic process 22.78% (18/79) 2.25 0.0 2e-06
GO:0006355 regulation of DNA-templated transcription 21.52% (17/79) 2.3 0.0 2e-06
GO:2001141 regulation of RNA biosynthetic process 21.52% (17/79) 2.3 0.0 2e-06
GO:0080090 regulation of primary metabolic process 21.52% (17/79) 2.19 0.0 3e-06
GO:0051171 regulation of nitrogen compound metabolic process 21.52% (17/79) 2.19 0.0 3e-06
GO:0010556 regulation of macromolecule biosynthetic process 22.78% (18/79) 2.25 0.0 3e-06
GO:0010468 regulation of gene expression 22.78% (18/79) 2.26 0.0 7e-06
GO:0050794 regulation of cellular process 24.05% (19/79) 1.9 0.0 9e-06
GO:0003700 DNA-binding transcription factor activity 16.46% (13/79) 2.41 1e-06 1.5e-05
GO:0050789 regulation of biological process 24.05% (19/79) 1.81 1e-06 1.9e-05
GO:0140110 transcription regulator activity 16.46% (13/79) 2.32 2e-06 2.5e-05
GO:0065007 biological regulation 24.05% (19/79) 1.78 2e-06 2.6e-05
GO:1902679 negative regulation of RNA biosynthetic process 5.06% (4/79) 4.97 9e-06 0.000113
GO:0045892 negative regulation of DNA-templated transcription 5.06% (4/79) 4.97 9e-06 0.000113
GO:0051253 negative regulation of RNA metabolic process 5.06% (4/79) 4.88 1.1e-05 0.000137
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 5.06% (4/79) 4.84 1.2e-05 0.000147
GO:0051172 negative regulation of nitrogen compound metabolic process 5.06% (4/79) 4.13 8.4e-05 0.000957
GO:0031327 negative regulation of cellular biosynthetic process 5.06% (4/79) 3.52 0.000423 0.004274
GO:0009890 negative regulation of biosynthetic process 5.06% (4/79) 3.52 0.000423 0.004274
GO:0010558 negative regulation of macromolecule biosynthetic process 5.06% (4/79) 3.52 0.000423 0.004274
GO:0031324 negative regulation of cellular metabolic process 5.06% (4/79) 3.38 0.000612 0.005958
GO:0010605 negative regulation of macromolecule metabolic process 5.06% (4/79) 3.35 0.000661 0.005992
GO:0009892 negative regulation of metabolic process 5.06% (4/79) 3.35 0.000661 0.005992
GO:0005249 voltage-gated potassium channel activity 2.53% (2/79) 5.44 0.000972 0.008525
GO:0048523 negative regulation of cellular process 5.06% (4/79) 3.1 0.001254 0.010307
GO:0022843 voltage-gated monoatomic cation channel activity 2.53% (2/79) 5.27 0.001244 0.010557
GO:0005267 potassium channel activity 2.53% (2/79) 5.16 0.001443 0.011504
GO:0048519 negative regulation of biological process 5.06% (4/79) 3.01 0.001576 0.012192
GO:0010338 leaf formation 1.27% (1/79) 8.97 0.002 0.014612
GO:0051741 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity 1.27% (1/79) 8.97 0.002 0.014612
GO:0071486 cellular response to high light intensity 1.27% (1/79) 7.97 0.003996 0.026949
GO:0071484 cellular response to light intensity 1.27% (1/79) 7.97 0.003996 0.026949
GO:0080132 fatty acid alpha-hydroxylase activity 1.27% (1/79) 7.97 0.003996 0.026949
GO:0003677 DNA binding 12.66% (10/79) 1.34 0.005929 0.038985
GO:0004534 5'-3' RNA exonuclease activity 1.27% (1/79) 6.97 0.007977 0.042814
GO:0009644 response to high light intensity 1.27% (1/79) 6.97 0.007977 0.042814
GO:0009642 response to light intensity 1.27% (1/79) 6.97 0.007977 0.042814
GO:0046084 adenine biosynthetic process 1.27% (1/79) 6.97 0.007977 0.042814
GO:0046083 adenine metabolic process 1.27% (1/79) 6.97 0.007977 0.042814
GO:0043096 purine nucleobase salvage 1.27% (1/79) 6.97 0.007977 0.042814
GO:0003999 adenine phosphoribosyltransferase activity 1.27% (1/79) 6.97 0.007977 0.042814
GO:0006168 adenine salvage 1.27% (1/79) 6.97 0.007977 0.042814
GO:0005244 voltage-gated monoatomic ion channel activity 2.53% (2/79) 3.84 0.008735 0.045047
GO:0022832 voltage-gated channel activity 2.53% (2/79) 3.84 0.008735 0.045047
GO:1905393 plant organ formation 1.27% (1/79) 6.64 0.009961 0.047632
GO:0048646 anatomical structure formation involved in morphogenesis 1.27% (1/79) 6.64 0.009961 0.047632
GO:0106130 purine phosphoribosyltransferase activity 1.27% (1/79) 6.64 0.009961 0.047632
GO:0004527 exonuclease activity 2.53% (2/79) 3.94 0.007572 0.048573
GO:0015079 potassium ion transmembrane transporter activity 2.53% (2/79) 3.76 0.00972 0.049159
GO:0006813 potassium ion transport 2.53% (2/79) 3.7 0.010489 0.049259
GO:0005261 monoatomic cation channel activity 2.53% (2/79) 3.68 0.010751 0.049605
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (79) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms