Coexpression cluster: Cluster_82 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004657 proline dehydrogenase activity 1.02% (2/197) 7.65 2.5e-05 0.001712
GO:0006562 proline catabolic process 1.02% (2/197) 7.65 2.5e-05 0.001712
GO:0009889 regulation of biosynthetic process 11.68% (23/197) 1.29 7.5e-05 0.00222
GO:0031326 regulation of cellular biosynthetic process 11.68% (23/197) 1.29 7.5e-05 0.00222
GO:0019219 regulation of nucleobase-containing compound metabolic process 11.68% (23/197) 1.4 2.4e-05 0.002442
GO:0016649 oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor 1.02% (2/197) 7.06 7.4e-05 0.002559
GO:0003700 DNA-binding transcription factor activity 9.14% (18/197) 1.56 4.5e-05 0.002673
GO:0140110 transcription regulator activity 9.14% (18/197) 1.47 9.9e-05 0.00273
GO:0010556 regulation of macromolecule biosynthetic process 11.68% (23/197) 1.29 7.4e-05 0.002782
GO:0051252 regulation of RNA metabolic process 11.68% (23/197) 1.41 2e-05 0.002796
GO:0080090 regulation of primary metabolic process 11.68% (23/197) 1.31 6.2e-05 0.002874
GO:0010468 regulation of gene expression 11.68% (23/197) 1.29 7.1e-05 0.002964
GO:0051171 regulation of nitrogen compound metabolic process 11.68% (23/197) 1.31 5.9e-05 0.00308
GO:0009065 glutamine family amino acid catabolic process 1.02% (2/197) 6.65 0.000148 0.003401
GO:0060255 regulation of macromolecule metabolic process 11.68% (23/197) 1.22 0.000147 0.00358
GO:0031323 regulation of cellular metabolic process 11.68% (23/197) 1.23 0.000138 0.003585
GO:0019222 regulation of metabolic process 11.68% (23/197) 1.21 0.000172 0.00376
GO:2001141 regulation of RNA biosynthetic process 11.68% (23/197) 1.42 1.9e-05 0.003901
GO:0006355 regulation of DNA-templated transcription 11.68% (23/197) 1.42 1.9e-05 0.003901
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 4.57% (9/197) 2.13 0.000245 0.005085
GO:0065007 biological regulation 14.21% (28/197) 1.02 0.000294 0.005802
GO:0006560 proline metabolic process 1.02% (2/197) 6.06 0.000366 0.006912
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 1.52% (3/197) 4.37 0.000406 0.007321
GO:0071577 zinc ion transmembrane transport 1.02% (2/197) 5.65 0.000679 0.011749
GO:0004497 monooxygenase activity 4.06% (8/197) 2.05 0.000774 0.012349
GO:0009064 glutamine family amino acid metabolic process 1.52% (3/197) 4.06 0.000773 0.012828
GO:0048856 anatomical structure development 2.54% (5/197) 2.76 0.000911 0.014002
GO:0050794 regulation of cellular process 12.69% (25/197) 0.98 0.000949 0.014066
GO:0050789 regulation of biological process 13.2% (26/197) 0.95 0.000991 0.014176
GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane 1.52% (3/197) 3.84 0.001216 0.015764
GO:0046618 xenobiotic export from cell 1.52% (3/197) 3.84 0.001216 0.015764
GO:0042908 xenobiotic transport 1.52% (3/197) 3.84 0.001216 0.015764
GO:0005385 zinc ion transmembrane transporter activity 1.02% (2/197) 5.19 0.001322 0.01613
GO:0005506 iron ion binding 4.06% (8/197) 1.94 0.001284 0.016152
GO:0006829 zinc ion transport 1.02% (2/197) 4.95 0.001862 0.022077
GO:0140115 export across plasma membrane 1.52% (3/197) 3.5 0.002383 0.027467
GO:0046914 transition metal ion binding 7.11% (14/197) 1.25 0.002537 0.028457
GO:0042910 xenobiotic transmembrane transporter activity 1.52% (3/197) 3.4 0.002933 0.032031
GO:0015291 secondary active transmembrane transporter activity 2.03% (4/197) 2.58 0.004655 0.049531
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (197) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms