Coexpression cluster: Cluster_258 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005737 cytoplasm 7.89% (6/76) 3.71 7e-06 0.002525
GO:0008237 metallopeptidase activity 5.26% (4/76) 4.08 9.7e-05 0.006897
GO:0016817 hydrolase activity, acting on acid anhydrides 10.53% (8/76) 2.49 8.8e-05 0.007865
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 10.53% (8/76) 2.51 8.3e-05 0.009818
GO:0016462 pyrophosphatase activity 10.53% (8/76) 2.53 7.3e-05 0.013005
GO:0036402 proteasome-activating activity 2.63% (2/76) 6.11 0.000377 0.014973
GO:0030163 protein catabolic process 3.95% (3/76) 4.44 0.000371 0.01656
GO:0017111 ribonucleoside triphosphate phosphatase activity 9.21% (7/76) 2.45 0.000297 0.01769
GO:0016787 hydrolase activity 21.05% (16/76) 1.32 0.000503 0.017959
GO:0009057 macromolecule catabolic process 6.58% (5/76) 3.04 0.000363 0.018533
GO:1901363 heterocyclic compound binding 22.37% (17/76) 1.25 0.000575 0.018673
GO:0006520 amino acid metabolic process 6.58% (5/76) 2.75 0.000898 0.018866
GO:0051603 proteolysis involved in protein catabolic process 5.26% (4/76) 3.25 0.000849 0.018936
GO:0036094 small molecule binding 22.37% (17/76) 1.24 0.000638 0.018994
GO:0140492 metal-dependent deubiquitinase activity 2.63% (2/76) 5.63 0.000749 0.019107
GO:0070122 obsolete isopeptidase activity 2.63% (2/76) 5.63 0.000749 0.019107
GO:0003824 catalytic activity 44.74% (34/76) 0.71 0.000828 0.019714
GO:0043168 anion binding 21.05% (16/76) 1.21 0.001135 0.022501
GO:0035639 purine ribonucleoside triphosphate binding 18.42% (14/76) 1.25 0.001939 0.030091
GO:0004635 phosphoribosyl-AMP cyclohydrolase activity 1.32% (1/76) 9.02 0.001924 0.031224
GO:0004636 phosphoribosyl-ATP diphosphatase activity 1.32% (1/76) 9.02 0.001924 0.031224
GO:0017076 purine nucleotide binding 19.74% (15/76) 1.21 0.00174 0.032702
GO:0003924 GTPase activity 5.26% (4/76) 2.94 0.001888 0.033694
GO:0004310 farnesyl-diphosphate farnesyltransferase activity 1.32% (1/76) 8.02 0.003845 0.037096
GO:0004160 dihydroxy-acid dehydratase activity 1.32% (1/76) 8.02 0.003845 0.037096
GO:0004814 arginine-tRNA ligase activity 1.32% (1/76) 8.02 0.003845 0.037096
GO:0006420 arginyl-tRNA aminoacylation 1.32% (1/76) 8.02 0.003845 0.037096
GO:0032555 purine ribonucleotide binding 18.42% (14/76) 1.19 0.002896 0.039759
GO:0097367 carbohydrate derivative binding 18.42% (14/76) 1.16 0.003399 0.040452
GO:0019001 guanyl nucleotide binding 5.26% (4/76) 2.69 0.003547 0.040848
GO:0000166 nucleotide binding 19.74% (15/76) 1.13 0.00287 0.040982
GO:1901265 nucleoside phosphate binding 19.74% (15/76) 1.13 0.00287 0.040982
GO:0005575 cellular_component 23.68% (18/76) 0.96 0.003836 0.0415
GO:0005839 proteasome core complex 2.63% (2/76) 4.47 0.003734 0.041661
GO:0005525 GTP binding 5.26% (4/76) 2.7 0.003393 0.041772
GO:0032561 guanyl ribonucleotide binding 5.26% (4/76) 2.7 0.003393 0.041772
GO:0032553 ribonucleotide binding 18.42% (14/76) 1.17 0.003161 0.041799
GO:0070536 protein K63-linked deubiquitination 1.32% (1/76) 7.44 0.005761 0.046747
GO:0004350 glutamate-5-semialdehyde dehydrogenase activity 1.32% (1/76) 7.44 0.005761 0.046747
GO:0004349 glutamate 5-kinase activity 1.32% (1/76) 7.44 0.005761 0.046747
GO:0004801 transaldolase activity 1.32% (1/76) 7.44 0.005761 0.046747
GO:0003674 molecular_function 67.11% (51/76) 0.36 0.005984 0.04747
GO:0006511 ubiquitin-dependent protein catabolic process 3.95% (3/76) 3.09 0.005367 0.047902
GO:0043632 modification-dependent macromolecule catabolic process 3.95% (3/76) 3.09 0.005367 0.047902
GO:0019941 modification-dependent protein catabolic process 3.95% (3/76) 3.09 0.005367 0.047902
GO:0043167 ion binding 25.0% (19/76) 0.86 0.006444 0.04895
GO:0044281 small molecule metabolic process 9.21% (7/76) 1.68 0.006333 0.049151
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (76) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms