Coexpression cluster: Cluster_232 (Zea mays HCCA coexpression clusters - Leiboff and Hake (2019))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016787 hydrolase activity 27.69% (18/65) 1.72 4e-06 0.001636
GO:0016817 hydrolase activity, acting on acid anhydrides 12.31% (8/65) 2.72 2.8e-05 0.005153
GO:0000287 magnesium ion binding 6.15% (4/65) 4.13 8.4e-05 0.010242
GO:0140326 ATPase-coupled intramembrane lipid transporter activity 3.08% (2/65) 6.44 0.00024 0.01749
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 10.77% (7/65) 2.54 0.000198 0.018099
GO:0015914 phospholipid transport 3.08% (2/65) 6.08 0.000401 0.0183
GO:0071702 organic substance transport 9.23% (6/65) 2.65 0.000394 0.02057
GO:0140303 intramembrane lipid transporter activity 3.08% (2/65) 6.16 0.000357 0.021712
GO:0000398 mRNA splicing, via spliceosome 4.62% (3/65) 4.25 0.000545 0.022096
GO:0000375 RNA splicing, via transesterification reactions 4.62% (3/65) 4.05 0.00081 0.022731
GO:0003824 catalytic activity 46.15% (30/65) 0.76 0.00088 0.022936
GO:0017111 ribonucleoside triphosphate phosphatase activity 9.23% (6/65) 2.45 0.000792 0.024097
GO:0005488 binding 50.77% (33/65) 0.68 0.001031 0.025085
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 4.62% (3/65) 4.12 0.000707 0.025818
GO:0005319 lipid transporter activity 3.08% (2/65) 5.6 0.000781 0.025904
GO:0030120 vesicle coat 3.08% (2/65) 5.04 0.001711 0.026024
GO:0016598 protein arginylation 1.54% (1/65) 9.25 0.001646 0.026116
GO:0004057 arginyl-tRNA--protein transferase activity 1.54% (1/65) 9.25 0.001646 0.026116
GO:0030620 U2 snRNA binding 1.54% (1/65) 9.25 0.001646 0.026116
GO:0008380 RNA splicing 4.62% (3/65) 3.84 0.001226 0.026321
GO:0044238 primary metabolic process 35.38% (23/65) 0.9 0.001394 0.026777
GO:0016462 pyrophosphatase activity 9.23% (6/65) 2.34 0.001175 0.026806
GO:0016070 RNA metabolic process 10.77% (7/65) 2.07 0.001374 0.027852
GO:0015748 organophosphate ester transport 3.08% (2/65) 5.12 0.001532 0.027959
GO:0090304 nucleic acid metabolic process 13.85% (9/65) 1.66 0.002025 0.029565
GO:0006139 nucleobase-containing compound metabolic process 15.38% (10/65) 1.51 0.002496 0.033738
GO:0043167 ion binding 27.69% (18/65) 1.01 0.002442 0.034281
GO:0008081 phosphoric diester hydrolase activity 3.08% (2/65) 4.69 0.002748 0.035824
GO:0006397 mRNA processing 4.62% (3/65) 3.41 0.002908 0.036596
GO:0000796 condensin complex 1.54% (1/65) 8.25 0.003289 0.038721
GO:0071013 catalytic step 2 spliceosome 1.54% (1/65) 8.25 0.003289 0.038721
GO:0008270 zinc ion binding 7.69% (5/65) 2.31 0.003401 0.038795
GO:0071704 organic substance metabolic process 35.38% (23/65) 0.8 0.003575 0.039546
GO:0051649 establishment of localization in cell 6.15% (4/65) 2.61 0.0042 0.040346
GO:0046907 intracellular transport 6.15% (4/65) 2.62 0.004126 0.040704
GO:0003674 molecular_function 69.23% (45/65) 0.41 0.003915 0.04083
GO:0016788 hydrolase activity, acting on ester bonds 9.23% (6/65) 2.0 0.003811 0.040912
GO:0016887 ATP hydrolysis activity 6.15% (4/65) 2.63 0.004089 0.041462
GO:0046872 metal ion binding 13.85% (9/65) 1.45 0.005254 0.041686
GO:0003724 RNA helicase activity 3.08% (2/65) 4.22 0.005188 0.042082
GO:0006869 lipid transport 3.08% (2/65) 4.22 0.005188 0.042082
GO:0008186 ATP-dependent activity, acting on RNA 3.08% (2/65) 4.22 0.005188 0.042082
GO:0042578 phosphoric ester hydrolase activity 6.15% (4/65) 2.51 0.005425 0.042133
GO:1901360 organic cyclic compound metabolic process 15.38% (10/65) 1.34 0.005576 0.042402
GO:0046483 heterocycle metabolic process 15.38% (10/65) 1.38 0.004536 0.042456
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins 1.54% (1/65) 7.66 0.004929 0.04388
GO:0016071 mRNA metabolic process 4.62% (3/65) 3.12 0.005079 0.044138
GO:0006725 cellular aromatic compound metabolic process 15.38% (10/65) 1.37 0.004888 0.044606
GO:0043169 cation binding 13.85% (9/65) 1.4 0.006731 0.046352
GO:0003723 RNA binding 9.23% (6/65) 1.84 0.00665 0.046678
GO:0016973 poly(A)+ mRNA export from nucleus 1.54% (1/65) 7.25 0.006567 0.046996
GO:0007076 mitotic chromosome condensation 1.54% (1/65) 7.25 0.006567 0.046996
GO:0032991 protein-containing complex 12.31% (8/65) 1.53 0.006349 0.047297
GO:0004843 cysteine-type deubiquitinase activity 3.08% (2/65) 4.0 0.007027 0.047495
GO:0016866 intramolecular transferase activity 3.08% (2/65) 3.87 0.008328 0.048252
GO:0017069 snRNA binding 1.54% (1/65) 6.93 0.008202 0.048284
GO:0004614 phosphoglucomutase activity 1.54% (1/65) 6.93 0.008202 0.048284
GO:0006891 intra-Golgi vesicle-mediated transport 1.54% (1/65) 6.93 0.008202 0.048284
GO:0008150 biological_process 52.31% (34/65) 0.5 0.008711 0.049678
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (65) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms