Coexpression cluster: Cluster_465 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:2000767 positive regulation of cytoplasmic translation 14.29% (8/56) 9.62 0.0 0.0
GO:2000765 regulation of cytoplasmic translation 14.29% (8/56) 9.62 0.0 0.0
GO:0034250 positive regulation of amide metabolic process 14.29% (8/56) 8.36 0.0 0.0
GO:0045727 positive regulation of translation 14.29% (8/56) 8.36 0.0 0.0
GO:0003727 single-stranded RNA binding 14.29% (8/56) 7.91 0.0 0.0
GO:0010628 positive regulation of gene expression 14.29% (8/56) 7.75 0.0 0.0
GO:0006417 regulation of translation 14.29% (8/56) 6.57 0.0 0.0
GO:0034248 regulation of amide metabolic process 14.29% (8/56) 6.57 0.0 0.0
GO:0051247 positive regulation of protein metabolic process 14.29% (8/56) 6.46 0.0 0.0
GO:0045182 translation regulator activity 14.29% (8/56) 6.29 0.0 0.0
GO:0010608 post-transcriptional regulation of gene expression 14.29% (8/56) 5.61 0.0 0.0
GO:0008270 zinc ion binding 19.64% (11/56) 4.09 0.0 0.0
GO:0051246 regulation of protein metabolic process 14.29% (8/56) 5.28 0.0 0.0
GO:0031328 positive regulation of cellular biosynthetic process 14.29% (8/56) 5.22 0.0 0.0
GO:0009891 positive regulation of biosynthetic process 14.29% (8/56) 5.22 0.0 0.0
GO:0010557 positive regulation of macromolecule biosynthetic process 14.29% (8/56) 5.22 0.0 0.0
GO:0031325 positive regulation of cellular metabolic process 14.29% (8/56) 4.91 0.0 0.0
GO:0048522 positive regulation of cellular process 14.29% (8/56) 4.73 0.0 0.0
GO:0051173 positive regulation of nitrogen compound metabolic process 14.29% (8/56) 4.71 0.0 0.0
GO:0009893 positive regulation of metabolic process 14.29% (8/56) 4.69 0.0 0.0
GO:0010604 positive regulation of macromolecule metabolic process 14.29% (8/56) 4.69 0.0 0.0
GO:0003729 mRNA binding 14.29% (8/56) 4.67 0.0 0.0
GO:0048518 positive regulation of biological process 14.29% (8/56) 4.47 0.0 0.0
GO:0046914 transition metal ion binding 19.64% (11/56) 3.22 0.0 0.0
GO:0046872 metal ion binding 21.43% (12/56) 2.81 0.0 0.0
GO:0043169 cation binding 21.43% (12/56) 2.77 0.0 1e-06
GO:0003723 RNA binding 14.29% (8/56) 2.7 3.1e-05 0.000123
GO:0005737 cytoplasm 16.07% (9/56) 2.32 7.2e-05 0.000277
GO:0051171 regulation of nitrogen compound metabolic process 14.29% (8/56) 2.3 0.000202 0.000751
GO:0080090 regulation of primary metabolic process 14.29% (8/56) 2.29 0.000215 0.000774
GO:0010468 regulation of gene expression 14.29% (8/56) 2.21 0.00031 0.00108
GO:0010556 regulation of macromolecule biosynthetic process 14.29% (8/56) 2.2 0.000324 0.001095
GO:0009889 regulation of biosynthetic process 14.29% (8/56) 2.17 0.000367 0.001165
GO:0031326 regulation of cellular biosynthetic process 14.29% (8/56) 2.18 0.000365 0.001194
GO:0043167 ion binding 26.79% (15/56) 1.38 0.000409 0.001261
GO:0050794 regulation of cellular process 17.86% (10/56) 1.82 0.000445 0.001336
GO:0060255 regulation of macromolecule metabolic process 14.29% (8/56) 2.07 0.000591 0.001726
GO:0031323 regulation of cellular metabolic process 14.29% (8/56) 2.06 0.000615 0.001748
GO:0050789 regulation of biological process 17.86% (10/56) 1.75 0.000653 0.00181
GO:0019222 regulation of metabolic process 14.29% (8/56) 2.02 0.000756 0.00204
GO:0003676 nucleic acid binding 19.64% (11/56) 1.58 0.000929 0.002446
GO:0065007 biological regulation 17.86% (10/56) 1.65 0.001124 0.002891
GO:0005544 calcium-dependent phospholipid binding 1.79% (1/56) 6.41 0.011675 0.029323
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (56) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms