Coexpression cluster: Cluster_693 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005575 cellular_component 66.41% (85/128) 1.73 0.0 0.0
GO:0008150 biological_process 67.97% (87/128) 1.29 0.0 0.0
GO:0110165 cellular anatomical entity 54.69% (70/128) 1.63 0.0 0.0
GO:0009987 cellular process 54.69% (70/128) 1.57 0.0 0.0
GO:0003723 RNA binding 21.09% (27/128) 3.26 0.0 0.0
GO:0003674 molecular_function 72.66% (93/128) 1.04 0.0 0.0
GO:0032991 protein-containing complex 26.56% (34/128) 2.52 0.0 0.0
GO:1990904 ribonucleoprotein complex 14.06% (18/128) 4.03 0.0 0.0
GO:0043226 organelle 33.59% (43/128) 2.04 0.0 0.0
GO:0043229 intracellular organelle 33.59% (43/128) 2.04 0.0 0.0
GO:0005488 binding 54.69% (70/128) 1.28 0.0 0.0
GO:0006807 nitrogen compound metabolic process 38.28% (49/128) 1.67 0.0 0.0
GO:0008152 metabolic process 42.97% (55/128) 1.42 0.0 0.0
GO:0003729 mRNA binding 10.16% (13/128) 4.17 0.0 0.0
GO:0003676 nucleic acid binding 26.56% (34/128) 2.01 0.0 0.0
GO:0071704 organic substance metabolic process 40.62% (52/128) 1.41 0.0 0.0
GO:0006396 RNA processing 12.5% (16/128) 3.38 0.0 0.0
GO:0043170 macromolecule metabolic process 33.59% (43/128) 1.63 0.0 0.0
GO:0022618 protein-RNA complex assembly 7.03% (9/128) 5.17 0.0 0.0
GO:0071826 protein-RNA complex organization 7.03% (9/128) 5.13 0.0 0.0
GO:0097159 organic cyclic compound binding 38.28% (49/128) 1.41 0.0 0.0
GO:0044238 primary metabolic process 38.28% (49/128) 1.41 0.0 0.0
GO:0044237 cellular metabolic process 33.59% (43/128) 1.52 0.0 0.0
GO:0043228 non-membrane-bounded organelle 11.72% (15/128) 3.23 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 11.72% (15/128) 3.23 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 21.88% (28/128) 2.03 0.0 0.0
GO:0016070 RNA metabolic process 14.84% (19/128) 2.61 0.0 0.0
GO:0019509 L-methionine salvage from methylthioadenosine 3.12% (4/128) 8.27 0.0 0.0
GO:0043102 amino acid salvage 3.12% (4/128) 8.27 0.0 0.0
GO:0071267 L-methionine salvage 3.12% (4/128) 8.27 0.0 0.0
GO:0071265 L-methionine biosynthetic process 3.12% (4/128) 8.22 0.0 0.0
GO:0016043 cellular component organization 14.84% (19/128) 2.49 0.0 0.0
GO:0065003 protein-containing complex assembly 7.81% (10/128) 3.85 0.0 0.0
GO:0006518 peptide metabolic process 7.03% (9/128) 4.04 0.0 0.0
GO:0071840 cellular component organization or biogenesis 14.84% (19/128) 2.33 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 10.16% (13/128) 3.03 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 25.0% (32/128) 1.59 0.0 0.0
GO:0030687 preribosome, large subunit precursor 3.91% (5/128) 6.06 0.0 0.0
GO:0000470 maturation of LSU-rRNA 3.91% (5/128) 6.04 0.0 0.0
GO:0005730 nucleolus 6.25% (8/128) 4.17 0.0 0.0
GO:0043874 acireductone synthase activity 2.34% (3/128) 9.14 0.0 0.0
GO:0043933 protein-containing complex organization 8.59% (11/128) 3.25 0.0 0.0
GO:0005737 cytoplasm 14.84% (19/128) 2.2 0.0 1e-06
GO:0030684 preribosome 5.47% (7/128) 4.48 0.0 1e-06
GO:0006364 rRNA processing 6.25% (8/128) 4.0 0.0 1e-06
GO:0009086 methionine biosynthetic process 3.12% (4/128) 6.87 0.0 1e-06
GO:0043231 intracellular membrane-bounded organelle 21.88% (28/128) 1.64 0.0 1e-06
GO:0006555 methionine metabolic process 3.12% (4/128) 6.76 0.0 1e-06
GO:0016071 mRNA metabolic process 7.03% (9/128) 3.61 0.0 1e-06
GO:0043227 membrane-bounded organelle 21.88% (28/128) 1.63 0.0 1e-06
GO:0046872 metal ion binding 14.06% (18/128) 2.2 0.0 1e-06
GO:0034660 ncRNA metabolic process 8.59% (11/128) 3.1 0.0 1e-06
GO:0016072 rRNA metabolic process 6.25% (8/128) 3.89 0.0 1e-06
GO:0022607 cellular component assembly 7.81% (10/128) 3.28 0.0 1e-06
GO:0043169 cation binding 14.06% (18/128) 2.16 0.0 2e-06
GO:0006139 nucleobase-containing compound metabolic process 17.19% (22/128) 1.87 0.0 2e-06
GO:0043603 amide metabolic process 7.03% (9/128) 3.48 0.0 2e-06
GO:0000398 mRNA splicing, via spliceosome 4.69% (6/128) 4.57 0.0 3e-06
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 4.69% (6/128) 4.49 0.0 4e-06
GO:0071458 obsolete integral component of cytoplasmic side of endoplasmic reticulum membrane 2.34% (3/128) 7.78 0.0 4e-06
GO:0071556 obsolete integral component of lumenal side of endoplasmic reticulum membrane 2.34% (3/128) 7.78 0.0 4e-06
GO:0006397 mRNA processing 5.47% (7/128) 3.95 0.0 5e-06
GO:0046483 heterocycle metabolic process 17.19% (22/128) 1.77 0.0 5e-06
GO:0034470 ncRNA processing 7.03% (9/128) 3.29 0.0 5e-06
GO:0000375 RNA splicing, via transesterification reactions 4.69% (6/128) 4.38 1e-06 6e-06
GO:0140513 nuclear protein-containing complex 9.38% (12/128) 2.65 1e-06 6e-06
GO:0043094 cellular metabolic compound salvage 3.12% (4/128) 5.98 1e-06 6e-06
GO:0006725 cellular aromatic compound metabolic process 17.19% (22/128) 1.74 1e-06 7e-06
GO:0000027 ribosomal large subunit assembly 3.12% (4/128) 5.89 1e-06 8e-06
GO:0033619 membrane protein proteolysis 2.34% (3/128) 7.46 1e-06 8e-06
GO:0015934 large ribosomal subunit 3.91% (5/128) 4.89 1e-06 9e-06
GO:0090304 nucleic acid metabolic process 14.84% (19/128) 1.89 1e-06 9e-06
GO:0005840 ribosome 4.69% (6/128) 4.24 1e-06 9e-06
GO:0005681 spliceosomal complex 4.69% (6/128) 4.23 1e-06 1e-05
GO:0042500 aspartic endopeptidase activity, intramembrane cleaving 2.34% (3/128) 7.31 1e-06 1e-05
GO:1901360 organic cyclic compound metabolic process 17.19% (22/128) 1.7 1e-06 1e-05
GO:0000097 sulfur amino acid biosynthetic process 3.12% (4/128) 5.76 1e-06 1e-05
GO:0008380 RNA splicing 4.69% (6/128) 4.15 1e-06 1.2e-05
GO:0000096 sulfur amino acid metabolic process 3.12% (4/128) 5.63 2e-06 1.3e-05
GO:0050794 regulation of cellular process 16.41% (21/128) 1.7 2e-06 1.6e-05
GO:0003735 structural constituent of ribosome 4.69% (6/128) 4.01 2e-06 2e-05
GO:0022406 membrane docking 3.12% (4/128) 5.43 3e-06 2.3e-05
GO:0140056 organelle localization by membrane tethering 3.12% (4/128) 5.43 3e-06 2.3e-05
GO:0046570 methylthioribulose 1-phosphate dehydratase activity 1.56% (2/128) 9.61 3e-06 2.4e-05
GO:0005198 structural molecule activity 5.47% (7/128) 3.52 3e-06 2.6e-05
GO:0009067 aspartate family amino acid biosynthetic process 3.12% (4/128) 5.32 4e-06 2.9e-05
GO:0007005 mitochondrion organization 3.12% (4/128) 5.29 4e-06 3.1e-05
GO:0071712 ER-associated misfolded protein catabolic process 2.34% (3/128) 6.67 4e-06 3.1e-05
GO:0050789 regulation of biological process 16.41% (21/128) 1.63 4e-06 3.1e-05
GO:0000349 generation of catalytic spliceosome for first transesterification step 1.56% (2/128) 9.39 4e-06 3.1e-05
GO:0006412 translation 4.69% (6/128) 3.84 5e-06 3.6e-05
GO:0005739 mitochondrion 6.25% (8/128) 3.09 5e-06 4.1e-05
GO:0071013 catalytic step 2 spliceosome 3.12% (4/128) 5.15 6e-06 4.3e-05
GO:0006465 signal peptide processing 2.34% (3/128) 6.38 7e-06 5.3e-05
GO:0043043 peptide biosynthetic process 4.69% (6/128) 3.71 8e-06 5.6e-05
GO:0044249 cellular biosynthetic process 11.72% (15/128) 1.96 8e-06 5.7e-05
GO:0019538 protein metabolic process 17.97% (23/128) 1.47 8e-06 5.8e-05
GO:0000460 maturation of 5.8S rRNA 2.34% (3/128) 6.33 8e-06 5.8e-05
GO:0009066 aspartate family amino acid metabolic process 3.12% (4/128) 4.97 1e-05 6.7e-05
GO:0140096 catalytic activity, acting on a protein 16.41% (21/128) 1.54 1e-05 7.1e-05
GO:0044391 ribosomal subunit 3.91% (5/128) 4.16 1.1e-05 7.2e-05
GO:0010468 regulation of gene expression 11.72% (15/128) 1.93 1.1e-05 7.2e-05
GO:0065007 biological regulation 16.41% (21/128) 1.53 1.2e-05 7.7e-05
GO:0010556 regulation of macromolecule biosynthetic process 11.72% (15/128) 1.92 1.2e-05 7.7e-05
GO:0043167 ion binding 23.44% (30/128) 1.19 1.4e-05 8.9e-05
GO:0009889 regulation of biosynthetic process 11.72% (15/128) 1.89 1.4e-05 9.2e-05
GO:0031326 regulation of cellular biosynthetic process 11.72% (15/128) 1.89 1.4e-05 9.2e-05
GO:1901576 organic substance biosynthetic process 11.72% (15/128) 1.84 2.2e-05 0.000137
GO:0044271 cellular nitrogen compound biosynthetic process 7.81% (10/128) 2.36 2.9e-05 0.000185
GO:0060255 regulation of macromolecule metabolic process 11.72% (15/128) 1.78 3.3e-05 0.000206
GO:0043604 amide biosynthetic process 4.69% (6/128) 3.32 3.6e-05 0.000218
GO:0031323 regulation of cellular metabolic process 11.72% (15/128) 1.78 3.5e-05 0.000219
GO:0009058 biosynthetic process 11.72% (15/128) 1.76 3.9e-05 0.000236
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins 2.34% (3/128) 5.55 4.1e-05 0.000245
GO:0004362 glutathione-disulfide reductase (NADP) activity 1.56% (2/128) 7.64 4.8e-05 0.000289
GO:0019222 regulation of metabolic process 11.72% (15/128) 1.73 5e-05 0.000299
GO:0044390 ubiquitin-like protein conjugating enzyme binding 2.34% (3/128) 5.38 5.8e-05 0.000339
GO:0071007 U2-type catalytic step 2 spliceosome 1.56% (2/128) 7.47 6.2e-05 0.000359
GO:0044272 sulfur compound biosynthetic process 3.12% (4/128) 4.25 6.6e-05 0.000381
GO:0098798 mitochondrial protein-containing complex 3.12% (4/128) 4.11 9.6e-05 0.000549
GO:0009194 pyrimidine ribonucleoside diphosphate biosynthetic process 1.56% (2/128) 6.84 0.000148 0.000814
GO:0009188 ribonucleoside diphosphate biosynthetic process 1.56% (2/128) 6.84 0.000148 0.000814
GO:0006225 UDP biosynthetic process 1.56% (2/128) 6.84 0.000148 0.000814
GO:0009041 UMP/dUMP kinase activity 1.56% (2/128) 6.84 0.000148 0.000814
GO:0033862 UMP kinase activity 1.56% (2/128) 6.84 0.000148 0.000814
GO:0009193 pyrimidine ribonucleoside diphosphate metabolic process 1.56% (2/128) 6.82 0.000151 0.000821
GO:0046048 UDP metabolic process 1.56% (2/128) 6.82 0.000151 0.000821
GO:0009139 pyrimidine nucleoside diphosphate biosynthetic process 1.56% (2/128) 6.75 0.000166 0.000888
GO:0009133 nucleoside diphosphate biosynthetic process 1.56% (2/128) 6.75 0.000166 0.000888
GO:0009138 pyrimidine nucleoside diphosphate metabolic process 1.56% (2/128) 6.74 0.00017 0.000901
GO:0051046 regulation of secretion 1.56% (2/128) 6.69 0.000182 0.000928
GO:1903530 regulation of secretion by cell 1.56% (2/128) 6.69 0.000182 0.000928
GO:0017157 regulation of exocytosis 1.56% (2/128) 6.7 0.000178 0.000935
GO:0051640 organelle localization 3.12% (4/128) 3.87 0.00018 0.00094
GO:0005684 U2-type spliceosomal complex 2.34% (3/128) 4.81 0.000182 0.000941
GO:0016485 protein processing 2.34% (3/128) 4.78 0.000196 0.000992
GO:0005643 nuclear pore 2.34% (3/128) 4.72 0.000218 0.001095
GO:0009059 macromolecule biosynthetic process 6.25% (8/128) 2.31 0.000241 0.001202
GO:0015038 glutathione disulfide oxidoreductase activity 1.56% (2/128) 6.42 0.000266 0.001316
GO:0000315 organellar large ribosomal subunit 1.56% (2/128) 6.4 0.000271 0.001321
GO:0005762 mitochondrial large ribosomal subunit 1.56% (2/128) 6.4 0.000271 0.001321
GO:0000974 Prp19 complex 1.56% (2/128) 6.39 0.000276 0.001335
GO:0009706 chloroplast inner membrane 1.56% (2/128) 6.38 0.00028 0.00134
GO:0009528 plastid inner membrane 1.56% (2/128) 6.38 0.00028 0.00134
GO:0071014 post-mRNA release spliceosomal complex 1.56% (2/128) 6.31 0.000306 0.001451
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.34% (3/128) 4.55 0.000311 0.001466
GO:0036503 ERAD pathway 2.34% (3/128) 4.52 0.000333 0.001557
GO:0031090 organelle membrane 5.47% (7/128) 2.42 0.000367 0.001663
GO:0035592 establishment of protein localization to extracellular region 1.56% (2/128) 6.19 0.000365 0.001664
GO:0009306 protein secretion 1.56% (2/128) 6.19 0.000365 0.001664
GO:0071692 protein localization to extracellular region 1.56% (2/128) 6.19 0.000365 0.001664
GO:1901607 alpha-amino acid biosynthetic process 3.12% (4/128) 3.6 0.00036 0.001671
GO:0022625 cytosolic large ribosomal subunit 2.34% (3/128) 4.44 0.000387 0.001741
GO:0006904 vesicle docking involved in exocytosis 1.56% (2/128) 6.1 0.000412 0.001839
GO:0042221 response to chemical 3.91% (5/128) 3.0 0.00045 0.001997
GO:0003824 catalytic activity 30.47% (39/128) 0.75 0.000469 0.002069
GO:0008652 amino acid biosynthetic process 3.12% (4/128) 3.49 0.000481 0.002108
GO:0060627 regulation of vesicle-mediated transport 1.56% (2/128) 5.97 0.000493 0.002146
GO:0006520 amino acid metabolic process 4.69% (6/128) 2.6 0.000511 0.002211
GO:0010243 response to organonitrogen compound 2.34% (3/128) 4.29 0.000521 0.00224
GO:0015780 nucleotide-sugar transmembrane transport 1.56% (2/128) 5.91 0.000533 0.002248
GO:0090481 pyrimidine nucleotide-sugar transmembrane transport 1.56% (2/128) 5.91 0.000533 0.002248
GO:0016859 cis-trans isomerase activity 2.34% (3/128) 4.28 0.000531 0.002271
GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor 1.56% (2/128) 5.87 0.00056 0.00235
GO:0061817 endoplasmic reticulum-plasma membrane tethering 1.56% (2/128) 5.8 0.000617 0.002557
GO:0051643 endoplasmic reticulum localization 1.56% (2/128) 5.8 0.000617 0.002557
GO:0050145 nucleoside monophosphate kinase activity 1.56% (2/128) 5.79 0.000632 0.002602
GO:0045454 cell redox homeostasis 1.56% (2/128) 5.75 0.000669 0.00274
GO:0016020 membrane 14.06% (18/128) 1.22 0.000685 0.00279
GO:0000387 spliceosomal snRNP assembly 1.56% (2/128) 5.71 0.0007 0.002831
GO:1901698 response to nitrogen compound 2.34% (3/128) 4.09 0.000775 0.003116
GO:0051604 protein maturation 2.34% (3/128) 4.07 0.000805 0.003218
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.56% (2/128) 5.58 0.000837 0.00333
GO:0140029 exocytic process 1.56% (2/128) 5.55 0.000871 0.003446
GO:0005634 nucleus 10.16% (13/128) 1.46 0.000966 0.003797
GO:0034248 regulation of amide metabolic process 2.34% (3/128) 3.96 0.001001 0.003868
GO:0006417 regulation of translation 2.34% (3/128) 3.96 0.001001 0.003868
GO:0042393 histone binding 2.34% (3/128) 3.97 0.000994 0.003887
GO:0003711 transcription elongation factor activity 0.78% (1/128) 9.87 0.001065 0.004069
GO:0032783 super elongation complex 0.78% (1/128) 9.87 0.001065 0.004069
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity 1.56% (2/128) 5.4 0.00108 0.004107
GO:0006790 sulfur compound metabolic process 3.12% (4/128) 3.17 0.001097 0.004149
GO:0051049 regulation of transport 1.56% (2/128) 5.36 0.001139 0.00428
GO:0015036 disulfide oxidoreductase activity 1.56% (2/128) 5.35 0.001158 0.004331
GO:0008135 translation factor activity, RNA binding 2.34% (3/128) 3.87 0.001217 0.004478
GO:0090079 translation regulator activity, nucleic acid binding 2.34% (3/128) 3.87 0.001217 0.004478
GO:0034976 response to endoplasmic reticulum stress 2.34% (3/128) 3.87 0.001217 0.004478
GO:0030159 signaling receptor complex adaptor activity 0.78% (1/128) 9.61 0.001277 0.004675
GO:1902494 catalytic complex 6.25% (8/128) 1.93 0.00131 0.004768
GO:0048278 vesicle docking 1.56% (2/128) 5.2 0.001407 0.005069
GO:0034599 cellular response to oxidative stress 1.56% (2/128) 5.2 0.001407 0.005069
GO:0062197 cellular response to chemical stress 1.56% (2/128) 5.17 0.001473 0.005279
GO:0035591 signaling adaptor activity 0.78% (1/128) 9.39 0.00149 0.005312
GO:0004190 aspartic-type endopeptidase activity 2.34% (3/128) 3.74 0.001548 0.00546
GO:0070001 aspartic-type peptidase activity 2.34% (3/128) 3.74 0.001548 0.00546
GO:0005338 nucleotide-sugar transmembrane transporter activity 1.56% (2/128) 5.09 0.001644 0.005772
GO:0045182 translation regulator activity 2.34% (3/128) 3.69 0.001734 0.006056
GO:0042273 ribosomal large subunit biogenesis 1.56% (2/128) 5.02 0.001812 0.006297
GO:0000287 magnesium ion binding 2.34% (3/128) 3.65 0.001858 0.006392
GO:0030173 obsolete integral component of Golgi membrane 1.56% (2/128) 5.0 0.001849 0.006393
GO:1901605 alpha-amino acid metabolic process 3.12% (4/128) 2.93 0.002004 0.006859
GO:0010629 negative regulation of gene expression 3.12% (4/128) 2.93 0.002025 0.006896
GO:0000413 protein peptidyl-prolyl isomerization 1.56% (2/128) 4.89 0.002144 0.007268
GO:1901264 carbohydrate derivative transport 1.56% (2/128) 4.86 0.002252 0.007595
GO:0090158 endoplasmic reticulum membrane organization 1.56% (2/128) 4.85 0.002266 0.007604
GO:0006508 proteolysis 5.47% (7/128) 1.95 0.002434 0.00813
GO:0009260 ribonucleotide biosynthetic process 2.34% (3/128) 3.51 0.002458 0.008171
GO:0060589 nucleoside-triphosphatase regulator activity 2.34% (3/128) 3.5 0.002492 0.008204
GO:0030695 GTPase regulator activity 2.34% (3/128) 3.5 0.002492 0.008204
GO:0010182 sugar mediated signaling pathway 0.78% (1/128) 8.61 0.002553 0.008285
GO:0009756 carbohydrate mediated signaling 0.78% (1/128) 8.61 0.002553 0.008285
GO:0019205 nucleobase-containing compound kinase activity 1.56% (2/128) 4.77 0.002547 0.008343
GO:0051539 4 iron, 4 sulfur cluster binding 1.56% (2/128) 4.74 0.002648 0.008555
GO:0046390 ribose phosphate biosynthetic process 2.34% (3/128) 3.46 0.002712 0.008638
GO:0016279 protein-lysine N-methyltransferase activity 1.56% (2/128) 4.72 0.002708 0.008664
GO:0016278 lysine N-methyltransferase activity 1.56% (2/128) 4.72 0.002708 0.008664
GO:0032879 regulation of localization 1.56% (2/128) 4.7 0.002782 0.008821
GO:0009220 pyrimidine ribonucleotide biosynthetic process 1.56% (2/128) 4.65 0.002997 0.009458
GO:0009218 pyrimidine ribonucleotide metabolic process 1.56% (2/128) 4.64 0.003012 0.009464
GO:0005783 endoplasmic reticulum 3.12% (4/128) 2.75 0.003102 0.009658
GO:0016776 phosphotransferase activity, phosphate group as acceptor 1.56% (2/128) 4.62 0.003091 0.009667
GO:0018208 peptidyl-proline modification 1.56% (2/128) 4.57 0.003333 0.010328
GO:0004842 ubiquitin-protein transferase activity 3.12% (4/128) 2.72 0.003371 0.010401
GO:0018193 peptidyl-amino acid modification 3.12% (4/128) 2.72 0.003401 0.010445
GO:0071705 nitrogen compound transport 4.69% (6/128) 2.06 0.003417 0.010447
GO:0098797 plasma membrane protein complex 1.56% (2/128) 4.54 0.003465 0.010502
GO:0099402 plant organ development 1.56% (2/128) 4.54 0.003465 0.010502
GO:0004660 protein farnesyltransferase activity 0.78% (1/128) 8.11 0.003615 0.010813
GO:0018343 protein farnesylation 0.78% (1/128) 8.11 0.003615 0.010813
GO:0005965 protein farnesyltransferase complex 0.78% (1/128) 8.11 0.003615 0.010813
GO:0044281 small molecule metabolic process 7.03% (9/128) 1.57 0.003647 0.010862
GO:0019787 ubiquitin-like protein transferase activity 3.12% (4/128) 2.67 0.003817 0.011321
GO:0034719 SMN-Sm protein complex 0.78% (1/128) 7.95 0.004039 0.011927
GO:0016755 aminoacyltransferase activity 3.12% (4/128) 2.64 0.004141 0.012175
GO:0009931 calcium-dependent protein serine/threonine kinase activity 1.56% (2/128) 4.39 0.004218 0.012192
GO:0010857 calcium-dependent protein kinase activity 1.56% (2/128) 4.39 0.004218 0.012192
GO:0006221 pyrimidine nucleotide biosynthetic process 1.56% (2/128) 4.4 0.004181 0.01224
GO:0006220 pyrimidine nucleotide metabolic process 1.56% (2/128) 4.4 0.004199 0.012242
GO:0004683 calmodulin-dependent protein kinase activity 1.56% (2/128) 4.38 0.004291 0.012353
GO:0005953 CAAX-protein geranylgeranyltransferase complex 0.78% (1/128) 7.8 0.004464 0.012586
GO:0004662 CAAX-protein geranylgeranyltransferase activity 0.78% (1/128) 7.8 0.004464 0.012586
GO:0043186 P granule 0.78% (1/128) 7.8 0.004464 0.012586
GO:0017148 negative regulation of translation 1.56% (2/128) 4.36 0.004421 0.012621
GO:0034249 negative regulation of amide metabolic process 1.56% (2/128) 4.36 0.004421 0.012621
GO:0006413 translational initiation 1.56% (2/128) 4.34 0.004534 0.012733
GO:0045901 positive regulation of translational elongation 0.78% (1/128) 7.74 0.004676 0.013077
GO:0046394 carboxylic acid biosynthetic process 3.12% (4/128) 2.58 0.00472 0.013095
GO:0016053 organic acid biosynthetic process 3.12% (4/128) 2.58 0.00472 0.013095
GO:0061630 ubiquitin protein ligase activity 2.34% (3/128) 3.16 0.004817 0.01331
GO:0045272 plasma membrane respiratory chain complex I 0.78% (1/128) 7.67 0.004888 0.013451
GO:0010558 negative regulation of macromolecule biosynthetic process 3.12% (4/128) 2.56 0.004961 0.013599
GO:0019843 rRNA binding 1.56% (2/128) 4.24 0.005179 0.014139
GO:0061659 ubiquitin-like protein ligase activity 2.34% (3/128) 3.1 0.005421 0.014741
GO:0009890 negative regulation of biosynthetic process 3.12% (4/128) 2.52 0.005561 0.014772
GO:0035598 N6-threonylcarbomyladenosine methylthiotransferase activity 0.78% (1/128) 7.5 0.005523 0.014787
GO:0035600 tRNA methylthiolation 0.78% (1/128) 7.5 0.005523 0.014787
GO:0031969 chloroplast membrane 1.56% (2/128) 4.19 0.005547 0.014793
GO:0070887 cellular response to chemical stimulus 1.56% (2/128) 4.2 0.005485 0.014799
GO:0031327 negative regulation of cellular biosynthetic process 3.12% (4/128) 2.52 0.005479 0.014841
GO:0051179 localization 9.38% (12/128) 1.22 0.005712 0.015114
GO:0005846 nuclear cap binding complex 0.78% (1/128) 7.44 0.005735 0.015118
GO:0006433 prolyl-tRNA aminoacylation 0.78% (1/128) 7.39 0.005947 0.015324
GO:0004827 proline-tRNA ligase activity 0.78% (1/128) 7.39 0.005947 0.015324
GO:0006434 seryl-tRNA aminoacylation 0.78% (1/128) 7.39 0.005947 0.015324
GO:0004828 serine-tRNA ligase activity 0.78% (1/128) 7.39 0.005947 0.015324
GO:1901293 nucleoside phosphate biosynthetic process 2.34% (3/128) 3.05 0.005904 0.015445
GO:0009165 nucleotide biosynthetic process 2.34% (3/128) 3.05 0.005904 0.015445
GO:0061024 membrane organization 2.34% (3/128) 3.04 0.006107 0.015676
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 1.56% (2/128) 4.1 0.006253 0.015993
GO:0009057 macromolecule catabolic process 3.91% (5/128) 2.11 0.006376 0.016187
GO:0090114 COPII-coated vesicle budding 0.78% (1/128) 7.29 0.006371 0.016233
GO:0010608 post-transcriptional regulation of gene expression 2.34% (3/128) 3.0 0.006513 0.016475
GO:0006457 protein folding 2.34% (3/128) 2.98 0.00679 0.017112
GO:0072528 pyrimidine-containing compound biosynthetic process 1.56% (2/128) 4.03 0.006882 0.017281
GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) 0.78% (1/128) 7.15 0.007005 0.017526
GO:0005515 protein binding 14.06% (18/128) 0.91 0.007225 0.018011
GO:0051641 cellular localization 4.69% (6/128) 1.82 0.007439 0.018476
GO:1901505 carbohydrate derivative transmembrane transporter activity 1.56% (2/128) 3.96 0.007515 0.018532
GO:0010605 negative regulation of macromolecule metabolic process 3.12% (4/128) 2.39 0.007508 0.018582
GO:0035596 methylthiotransferase activity 0.78% (1/128) 7.03 0.00764 0.018705
GO:0050497 alkylthioltransferase activity 0.78% (1/128) 7.03 0.00764 0.018705
GO:0003743 translation initiation factor activity 1.56% (2/128) 3.94 0.007732 0.018863
GO:0120114 Sm-like protein family complex 1.56% (2/128) 3.93 0.007853 0.019025
GO:0031324 negative regulation of cellular metabolic process 3.12% (4/128) 2.37 0.007932 0.019081
GO:0032797 SMN complex 0.78% (1/128) 6.99 0.007851 0.019087
GO:0019866 organelle inner membrane 1.56% (2/128) 3.92 0.007927 0.019135
GO:0072527 pyrimidine-containing compound metabolic process 1.56% (2/128) 3.9 0.008099 0.019347
GO:0009892 negative regulation of metabolic process 3.12% (4/128) 2.36 0.008081 0.019373
GO:0051248 negative regulation of protein metabolic process 1.56% (2/128) 3.9 0.008148 0.019398
GO:0046777 protein autophosphorylation 1.56% (2/128) 3.89 0.008248 0.019568
GO:0022613 ribonucleoprotein complex biogenesis 1.56% (2/128) 3.85 0.008728 0.019949
GO:0010498 proteasomal protein catabolic process 2.34% (3/128) 2.85 0.008715 0.019987
GO:0015932 nucleobase-containing compound transmembrane transporter activity 1.56% (2/128) 3.85 0.008702 0.020024
GO:0010492 maintenance of shoot apical meristem identity 0.78% (1/128) 6.84 0.008696 0.020077
GO:0019827 stem cell population maintenance 0.78% (1/128) 6.84 0.008696 0.020077
GO:0098727 maintenance of cell number 0.78% (1/128) 6.84 0.008696 0.020077
GO:0090421 embryonic meristem initiation 0.78% (1/128) 6.84 0.008696 0.020077
GO:0010078 maintenance of root meristem identity 0.78% (1/128) 6.84 0.008696 0.020077
GO:0010074 maintenance of meristem identity 0.78% (1/128) 6.84 0.008696 0.020077
GO:0010071 root meristem specification 0.78% (1/128) 6.84 0.008696 0.020077
GO:0004175 endopeptidase activity 3.12% (4/128) 2.33 0.008549 0.020212
GO:0045905 positive regulation of translational termination 0.78% (1/128) 6.8 0.008907 0.020226
GO:0043243 positive regulation of protein-containing complex disassembly 0.78% (1/128) 6.8 0.008907 0.020226
GO:0006448 regulation of translational elongation 0.78% (1/128) 6.74 0.00933 0.021045
GO:0006449 regulation of translational termination 0.78% (1/128) 6.74 0.00933 0.021045
GO:0016272 prefoldin complex 0.78% (1/128) 6.7 0.009541 0.021451
GO:0098800 inner mitochondrial membrane protein complex 1.56% (2/128) 3.76 0.009805 0.021974
GO:0006996 organelle organization 4.69% (6/128) 1.73 0.009997 0.022331
GO:0019899 enzyme binding 2.34% (3/128) 2.77 0.010045 0.022366
GO:0005829 cytosol 4.69% (6/128) 1.72 0.010192 0.022619
GO:0005850 eukaryotic translation initiation factor 2 complex 0.78% (1/128) 6.52 0.010806 0.023752
GO:0004661 protein geranylgeranyltransferase activity 0.78% (1/128) 6.52 0.010806 0.023752
GO:0010014 meristem initiation 0.78% (1/128) 6.52 0.010806 0.023752
GO:0030163 protein catabolic process 2.34% (3/128) 2.72 0.010971 0.023962
GO:0016836 hydro-lyase activity 1.56% (2/128) 3.68 0.010939 0.023967
GO:0019752 carboxylic acid metabolic process 4.69% (6/128) 1.69 0.011452 0.024934
GO:0043436 oxoacid metabolic process 4.69% (6/128) 1.68 0.0116 0.025177
GO:0006082 organic acid metabolic process 4.69% (6/128) 1.68 0.011642 0.025188
GO:0005274 allantoin:proton symporter activity 0.78% (1/128) 6.36 0.01207 0.025709
GO:0015505 uracil:monoatomic cation symporter activity 0.78% (1/128) 6.36 0.01207 0.025709
GO:0015210 uracil transmembrane transporter activity 0.78% (1/128) 6.36 0.01207 0.025709
GO:0005350 pyrimidine nucleobase transmembrane transporter activity 0.78% (1/128) 6.36 0.01207 0.025709
GO:0015391 nucleobase:monoatomic cation symporter activity 0.78% (1/128) 6.36 0.01207 0.025709
GO:0051246 regulation of protein metabolic process 2.34% (3/128) 2.67 0.012148 0.025795
GO:0032502 developmental process 2.34% (3/128) 2.66 0.012412 0.026275
GO:0051536 iron-sulfur cluster binding 1.56% (2/128) 3.55 0.012969 0.026795
GO:0051540 metal cluster binding 1.56% (2/128) 3.55 0.012969 0.026795
GO:0005834 heterotrimeric G-protein complex 0.78% (1/128) 6.27 0.012911 0.026836
GO:1905360 GTPase complex 0.78% (1/128) 6.27 0.012911 0.026836
GO:0005851 eukaryotic translation initiation factor 2B complex 0.78% (1/128) 6.27 0.012911 0.026836
GO:0098796 membrane protein complex 3.12% (4/128) 2.16 0.012825 0.026983
GO:0005096 GTPase activator activity 1.56% (2/128) 3.56 0.012817 0.027049
GO:0032040 small-subunit processome 1.56% (2/128) 3.55 0.012908 0.027076
GO:0008170 N-methyltransferase activity 1.56% (2/128) 3.54 0.013184 0.027076
GO:0010033 response to organic substance 2.34% (3/128) 2.62 0.013179 0.027147
GO:0140603 obsolete ATP hydrolysis activity 0.78% (1/128) 6.15 0.013962 0.028589
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.91% (5/128) 1.82 0.014154 0.028896
GO:0005687 U4 snRNP 0.78% (1/128) 6.11 0.014382 0.029275
GO:0000139 Golgi membrane 1.56% (2/128) 3.47 0.014439 0.029304
GO:0008276 protein methyltransferase activity 1.56% (2/128) 3.46 0.014567 0.029477
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 0.78% (1/128) 6.07 0.014802 0.029777
GO:0032940 secretion by cell 1.56% (2/128) 3.45 0.01476 0.029781
GO:0005516 calmodulin binding 1.56% (2/128) 3.43 0.015085 0.030258
GO:0018344 protein geranylgeranylation 0.78% (1/128) 6.03 0.015222 0.030443
GO:0008233 peptidase activity 3.91% (5/128) 1.79 0.015344 0.030599
GO:0001731 formation of translation preinitiation complex 0.78% (1/128) 6.01 0.015432 0.030685
GO:0000956 nuclear-transcribed mRNA catabolic process 1.56% (2/128) 3.41 0.015512 0.030756
GO:0046903 secretion 1.56% (2/128) 3.39 0.015843 0.031323
GO:0008270 zinc ion binding 3.91% (5/128) 1.76 0.016739 0.032998
GO:0008318 protein prenyltransferase activity 0.78% (1/128) 5.87 0.016899 0.033124
GO:0042134 rRNA primary transcript binding 0.78% (1/128) 5.87 0.016899 0.033124
GO:0009185 ribonucleoside diphosphate metabolic process 1.56% (2/128) 3.33 0.017235 0.033687
GO:0009132 nucleoside diphosphate metabolic process 1.56% (2/128) 3.32 0.017408 0.033929
GO:0044283 small molecule biosynthetic process 3.12% (4/128) 2.02 0.017504 0.03402
GO:0001732 formation of cytoplasmic translation initiation complex 0.78% (1/128) 5.79 0.017945 0.034779
GO:0015205 nucleobase transmembrane transporter activity 0.78% (1/128) 5.77 0.018155 0.035085
GO:0035639 purine ribonucleoside triphosphate binding 10.16% (13/128) 0.94 0.018411 0.035382
GO:0016462 pyrophosphatase activity 3.91% (5/128) 1.73 0.018374 0.035409
GO:0009259 ribonucleotide metabolic process 2.34% (3/128) 2.43 0.018732 0.035898
GO:0018105 peptidyl-serine phosphorylation 1.56% (2/128) 3.26 0.018964 0.036141
GO:0018209 peptidyl-serine modification 1.56% (2/128) 3.26 0.018964 0.036141
GO:0048523 negative regulation of cellular process 3.12% (4/128) 1.99 0.01908 0.036263
GO:0000339 RNA cap binding 0.78% (1/128) 5.69 0.0192 0.03639
GO:0015248 sterol transporter activity 0.78% (1/128) 5.67 0.019409 0.036685
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.91% (5/128) 1.7 0.01961 0.036963
GO:0140352 export from cell 1.56% (2/128) 3.22 0.019909 0.037425
GO:0031080 nuclear pore outer ring 0.78% (1/128) 5.61 0.020244 0.037644
GO:0006749 glutathione metabolic process 1.56% (2/128) 3.21 0.020093 0.037668
GO:0048519 negative regulation of biological process 3.12% (4/128) 1.96 0.020209 0.03768
GO:0016817 hydrolase activity, acting on acid anhydrides 3.91% (5/128) 1.69 0.020332 0.037706
GO:0033554 cellular response to stress 3.91% (5/128) 1.69 0.020195 0.037756
GO:0098656 monoatomic anion transmembrane transport 0.78% (1/128) 5.58 0.020662 0.038111
GO:0005682 U5 snRNP 0.78% (1/128) 5.58 0.020662 0.038111
GO:0019693 ribose phosphate metabolic process 2.34% (3/128) 2.37 0.020829 0.038316
GO:1901137 carbohydrate derivative biosynthetic process 2.34% (3/128) 2.36 0.021368 0.038484
GO:0006810 transport 7.81% (10/128) 1.07 0.021319 0.038497
GO:0097354 prenylation 0.78% (1/128) 5.54 0.021288 0.038542
GO:0018342 protein prenylation 0.78% (1/128) 5.54 0.021288 0.038542
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 0.78% (1/128) 5.54 0.021288 0.038542
GO:0006511 ubiquitin-dependent protein catabolic process 2.34% (3/128) 2.37 0.021028 0.038578
GO:0000976 transcription cis-regulatory region binding 2.34% (3/128) 2.36 0.021287 0.038848
GO:0001067 transcription regulatory region nucleic acid binding 2.34% (3/128) 2.36 0.021287 0.038848
GO:0051716 cellular response to stimulus 3.91% (5/128) 1.65 0.022548 0.040504
GO:0006402 mRNA catabolic process 1.56% (2/128) 3.1 0.023253 0.041661
GO:0016787 hydrolase activity 10.16% (13/128) 0.89 0.023849 0.042618
GO:0017101 aminoacyl-tRNA synthetase multienzyme complex 0.78% (1/128) 5.33 0.024618 0.043879
GO:0034654 nucleobase-containing compound biosynthetic process 3.12% (4/128) 1.87 0.024842 0.044163
GO:1990837 sequence-specific double-stranded DNA binding 2.34% (3/128) 2.25 0.025816 0.045777
GO:0043244 regulation of protein-containing complex disassembly 0.78% (1/128) 5.23 0.02628 0.046479
GO:0031369 translation initiation factor binding 0.78% (1/128) 5.22 0.026487 0.046726
GO:0019941 modification-dependent protein catabolic process 2.34% (3/128) 2.23 0.026829 0.047209
GO:0006399 tRNA metabolic process 2.34% (3/128) 2.22 0.027241 0.04781
GO:0005689 U12-type spliceosomal complex 0.78% (1/128) 5.14 0.027938 0.048785
GO:0051234 establishment of localization 7.81% (10/128) 1.01 0.027885 0.048816
GO:0015252 proton channel activity 0.78% (1/128) 5.1 0.028766 0.049601
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 0.78% (1/128) 5.1 0.028766 0.049601
GO:0032981 mitochondrial respiratory chain complex I assembly 0.78% (1/128) 5.11 0.028559 0.049618
GO:0016853 isomerase activity 2.34% (3/128) 2.2 0.028494 0.049631
GO:0015931 nucleobase-containing compound transport 1.56% (2/128) 2.93 0.02875 0.049824
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (128) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms