Coexpression cluster: Cluster_382 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1902102 regulation of metaphase/anaphase transition of meiotic cell cycle 2.33% (3/129) 9.86 0.0 0.0
GO:1901993 regulation of meiotic cell cycle phase transition 2.33% (3/129) 9.86 0.0 0.0
GO:1902103 negative regulation of metaphase/anaphase transition of meiotic cell cycle 2.33% (3/129) 9.86 0.0 0.0
GO:0071459 protein localization to chromosome, centromeric region 2.33% (3/129) 9.86 0.0 0.0
GO:1903083 protein localization to condensed chromosome 2.33% (3/129) 9.86 0.0 0.0
GO:1905132 regulation of meiotic chromosome separation 2.33% (3/129) 9.86 0.0 0.0
GO:1905133 negative regulation of meiotic chromosome separation 2.33% (3/129) 9.86 0.0 0.0
GO:1901994 negative regulation of meiotic cell cycle phase transition 2.33% (3/129) 9.86 0.0 0.0
GO:0044779 meiotic spindle checkpoint signaling 2.33% (3/129) 9.86 0.0 0.0
GO:0034501 protein localization to kinetochore 2.33% (3/129) 9.86 0.0 0.0
GO:0033316 meiotic spindle assembly checkpoint signaling 2.33% (3/129) 9.86 0.0 0.0
GO:0051447 negative regulation of meiotic cell cycle 2.33% (3/129) 8.91 0.0 2e-06
GO:1901991 negative regulation of mitotic cell cycle phase transition 3.88% (5/129) 5.7 0.0 2e-06
GO:0033313 meiotic cell cycle checkpoint signaling 2.33% (3/129) 8.64 0.0 3e-06
GO:0007093 mitotic cell cycle checkpoint signaling 3.88% (5/129) 5.44 0.0 5e-06
GO:0034502 protein localization to chromosome 2.33% (3/129) 8.22 0.0 5e-06
GO:1901990 regulation of mitotic cell cycle phase transition 3.88% (5/129) 5.34 0.0 7e-06
GO:2000242 negative regulation of reproductive process 2.33% (3/129) 8.02 0.0 7e-06
GO:0045930 negative regulation of mitotic cell cycle 3.88% (5/129) 5.24 0.0 8e-06
GO:0000075 cell cycle checkpoint signaling 3.88% (5/129) 5.04 1e-06 1.5e-05
GO:1901988 negative regulation of cell cycle phase transition 3.88% (5/129) 4.91 1e-06 2.2e-05
GO:0010948 negative regulation of cell cycle process 3.88% (5/129) 4.91 1e-06 2.2e-05
GO:0007346 regulation of mitotic cell cycle 3.88% (5/129) 4.84 1e-06 2.6e-05
GO:0045786 negative regulation of cell cycle 3.88% (5/129) 4.81 1e-06 2.7e-05
GO:0004712 protein serine/threonine/tyrosine kinase activity 2.33% (3/129) 7.14 1e-06 3.3e-05
GO:1901987 regulation of cell cycle phase transition 3.88% (5/129) 4.68 2e-06 4e-05
GO:0051445 regulation of meiotic cell cycle 2.33% (3/129) 6.9 2e-06 5.1e-05
GO:0019933 cAMP-mediated signaling 1.55% (2/129) 9.38 4e-06 7.7e-05
GO:0008179 adenylate cyclase binding 1.55% (2/129) 9.38 4e-06 7.7e-05
GO:0019935 cyclic-nucleotide-mediated signaling 1.55% (2/129) 9.38 4e-06 7.7e-05
GO:0035556 intracellular signal transduction 5.43% (7/129) 3.33 7e-06 0.000131
GO:0003676 nucleic acid binding 17.83% (23/129) 1.44 1.2e-05 0.000143
GO:0033047 regulation of mitotic sister chromatid segregation 2.33% (3/129) 6.15 1.2e-05 0.000143
GO:2000816 negative regulation of mitotic sister chromatid separation 2.33% (3/129) 6.16 1.1e-05 0.000145
GO:1905819 negative regulation of chromosome separation 2.33% (3/129) 6.16 1.1e-05 0.000145
GO:0051985 negative regulation of chromosome segregation 2.33% (3/129) 6.16 1.1e-05 0.000145
GO:0045839 negative regulation of mitotic nuclear division 2.33% (3/129) 6.16 1.1e-05 0.000145
GO:0033048 negative regulation of mitotic sister chromatid segregation 2.33% (3/129) 6.16 1.1e-05 0.000145
GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle 2.33% (3/129) 6.16 1.1e-05 0.000145
GO:0045841 negative regulation of mitotic metaphase/anaphase transition 2.33% (3/129) 6.16 1.1e-05 0.000145
GO:0033046 negative regulation of sister chromatid segregation 2.33% (3/129) 6.16 1.1e-05 0.000145
GO:0000776 kinetochore 2.33% (3/129) 6.09 1.3e-05 0.000157
GO:0051784 negative regulation of nuclear division 2.33% (3/129) 6.06 1.4e-05 0.000163
GO:0010564 regulation of cell cycle process 3.88% (5/129) 4.18 1e-05 0.00017
GO:0007094 mitotic spindle assembly checkpoint signaling 2.33% (3/129) 6.18 1.1e-05 0.000171
GO:0071174 mitotic spindle checkpoint signaling 2.33% (3/129) 6.18 1.1e-05 0.000171
GO:0031577 spindle checkpoint signaling 2.33% (3/129) 6.18 1.1e-05 0.000171
GO:0071173 spindle assembly checkpoint signaling 2.33% (3/129) 6.18 1.1e-05 0.000171
GO:2001251 negative regulation of chromosome organization 2.33% (3/129) 5.85 2.2e-05 0.00025
GO:0030071 regulation of mitotic metaphase/anaphase transition 2.33% (3/129) 5.76 2.6e-05 0.000271
GO:0010965 regulation of mitotic sister chromatid separation 2.33% (3/129) 5.76 2.6e-05 0.000271
GO:0007088 regulation of mitotic nuclear division 2.33% (3/129) 5.76 2.6e-05 0.000271
GO:1905818 regulation of chromosome separation 2.33% (3/129) 5.76 2.6e-05 0.000271
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 2.33% (3/129) 5.76 2.6e-05 0.000271
GO:0007059 chromosome segregation 2.33% (3/129) 5.68 3.1e-05 0.000315
GO:0010639 negative regulation of organelle organization 2.33% (3/129) 5.6 3.7e-05 0.000367
GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase 1.55% (2/129) 7.73 4.3e-05 0.000421
GO:0051129 negative regulation of cellular component organization 2.33% (3/129) 5.47 4.7e-05 0.000457
GO:0004824 lysine-tRNA ligase activity 1.55% (2/129) 7.63 4.9e-05 0.000457
GO:0006430 lysyl-tRNA aminoacylation 1.55% (2/129) 7.63 4.9e-05 0.000457
GO:0051726 regulation of cell cycle 3.88% (5/129) 3.65 5.5e-05 0.000505
GO:0033045 regulation of sister chromatid segregation 2.33% (3/129) 5.38 5.7e-05 0.000517
GO:0051783 regulation of nuclear division 2.33% (3/129) 5.29 6.9e-05 0.000609
GO:0051983 regulation of chromosome segregation 2.33% (3/129) 5.27 7.2e-05 0.000624
GO:0048523 negative regulation of cellular process 5.43% (7/129) 2.78 8.2e-05 0.000702
GO:2000241 regulation of reproductive process 2.33% (3/129) 5.17 8.7e-05 0.000737
GO:0048519 negative regulation of biological process 5.43% (7/129) 2.76 9.1e-05 0.00076
GO:0003729 mRNA binding 4.65% (6/129) 3.05 0.0001 0.00082
GO:0004371 glycerone kinase activity 1.55% (2/129) 7.02 0.000116 0.000936
GO:0044282 small molecule catabolic process 3.88% (5/129) 3.39 0.00013 0.001037
GO:0003723 RNA binding 8.53% (11/129) 1.95 0.000145 0.00114
GO:0007095 mitotic G2 DNA damage checkpoint signaling 1.55% (2/129) 6.83 0.00015 0.001164
GO:0019563 glycerol catabolic process 1.55% (2/129) 6.78 0.000161 0.001233
GO:0019405 alditol catabolic process 1.55% (2/129) 6.76 0.000165 0.001245
GO:1903047 mitotic cell cycle process 3.88% (5/129) 3.23 0.000214 0.001589
GO:0046174 polyol catabolic process 1.55% (2/129) 6.53 0.000228 0.001672
GO:0046164 alcohol catabolic process 1.55% (2/129) 6.46 0.000251 0.001771
GO:0033044 regulation of chromosome organization 2.33% (3/129) 4.67 0.000245 0.001772
GO:0005488 binding 36.43% (47/129) 0.69 0.00025 0.00179
GO:0033314 mitotic DNA replication checkpoint signaling 1.55% (2/129) 6.04 0.000449 0.003131
GO:1901616 organic hydroxy compound catabolic process 1.55% (2/129) 5.98 0.000487 0.003357
GO:0019932 second-messenger-mediated signaling 1.55% (2/129) 5.73 0.000687 0.004676
GO:0010972 negative regulation of G2/M transition of mitotic cell cycle 1.55% (2/129) 5.62 0.000791 0.005194
GO:0044818 mitotic G2/M transition checkpoint 1.55% (2/129) 5.62 0.000791 0.005194
GO:1902750 negative regulation of cell cycle G2/M phase transition 1.55% (2/129) 5.62 0.000791 0.005194
GO:0050794 regulation of cellular process 12.4% (16/129) 1.3 0.000814 0.00528
GO:0019400 alditol metabolic process 1.55% (2/129) 5.56 0.000859 0.005446
GO:0006071 glycerol metabolic process 1.55% (2/129) 5.57 0.00085 0.005453
GO:0099080 supramolecular complex 3.1% (4/129) 3.2 0.00103 0.006456
GO:0097159 organic cyclic compound binding 24.81% (32/129) 0.79 0.001178 0.007303
GO:1902749 regulation of cell cycle G2/M phase transition 1.55% (2/129) 5.25 0.00131 0.007385
GO:0010389 regulation of G2/M transition of mitotic cell cycle 1.55% (2/129) 5.25 0.00131 0.007385
GO:0000076 DNA replication checkpoint signaling 1.55% (2/129) 5.32 0.001206 0.007398
GO:0018105 peptidyl-serine phosphorylation 2.33% (3/129) 3.83 0.001308 0.007526
GO:0018209 peptidyl-serine modification 2.33% (3/129) 3.83 0.001308 0.007526
GO:0043066 negative regulation of apoptotic process 0.78% (1/129) 9.6 0.001287 0.007561
GO:0043228 non-membrane-bounded organelle 5.43% (7/129) 2.12 0.001261 0.007564
GO:0050789 regulation of biological process 12.4% (16/129) 1.23 0.001358 0.007577
GO:0044773 mitotic DNA damage checkpoint signaling 1.55% (2/129) 5.27 0.001279 0.00759
GO:0043232 intracellular non-membrane-bounded organelle 5.43% (7/129) 2.12 0.00126 0.00764
GO:0033365 protein localization to organelle 3.1% (4/129) 3.0 0.001679 0.009277
GO:0043226 organelle 16.28% (21/129) 1.0 0.001792 0.009707
GO:0043229 intracellular organelle 16.28% (21/129) 1.0 0.00179 0.00979
GO:0033043 regulation of organelle organization 2.33% (3/129) 3.61 0.002027 0.010771
GO:0043484 regulation of RNA splicing 1.55% (2/129) 4.94 0.002018 0.010829
GO:0044774 mitotic DNA integrity checkpoint signaling 1.55% (2/129) 4.84 0.002314 0.01207
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 3.1% (4/129) 2.88 0.002296 0.012087
GO:1903046 meiotic cell cycle process 2.33% (3/129) 3.5 0.002519 0.013014
GO:0007165 signal transduction 5.43% (7/129) 1.92 0.002676 0.013697
GO:0065007 biological regulation 12.4% (16/129) 1.13 0.002769 0.014044
GO:0022402 cell cycle process 3.88% (5/129) 2.39 0.002863 0.014392
GO:0005634 nucleus 9.3% (12/129) 1.33 0.003117 0.015123
GO:0000049 tRNA binding 1.55% (2/129) 4.62 0.00309 0.015127
GO:0042770 signal transduction in response to DNA damage 1.55% (2/129) 4.63 0.003074 0.015182
GO:0000077 DNA damage checkpoint signaling 1.55% (2/129) 4.63 0.003074 0.015182
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 3.1% (4/129) 2.74 0.003194 0.015365
GO:1901360 organic cyclic compound metabolic process 11.63% (15/129) 1.13 0.003582 0.017084
GO:0006270 DNA replication initiation 1.55% (2/129) 4.5 0.003655 0.017282
GO:0051128 regulation of cellular component organization 2.33% (3/129) 3.29 0.003731 0.017497
GO:0034641 cellular nitrogen compound metabolic process 11.63% (15/129) 1.12 0.003859 0.017795
GO:0044281 small molecule metabolic process 6.98% (9/129) 1.55 0.003839 0.017853
GO:0046983 protein dimerization activity 3.1% (4/129) 2.66 0.003948 0.018057
GO:0008270 zinc ion binding 4.65% (6/129) 2.01 0.003985 0.018078
GO:0043231 intracellular membrane-bounded organelle 13.95% (18/129) 0.99 0.004024 0.018106
GO:0006635 fatty acid beta-oxidation 1.55% (2/129) 4.39 0.004208 0.018784
GO:0043227 membrane-bounded organelle 13.95% (18/129) 0.98 0.004349 0.01926
GO:0042981 regulation of apoptotic process 0.78% (1/129) 7.79 0.004498 0.01961
GO:0019395 fatty acid oxidation 1.55% (2/129) 4.35 0.004489 0.019721
GO:0044238 primary metabolic process 23.26% (30/129) 0.69 0.004788 0.020712
GO:0031570 DNA integrity checkpoint signaling 1.55% (2/129) 4.27 0.004975 0.021354
GO:0016054 organic acid catabolic process 2.33% (3/129) 3.12 0.005185 0.021918
GO:0046395 carboxylic acid catabolic process 2.33% (3/129) 3.12 0.005185 0.021918
GO:0009062 fatty acid catabolic process 1.55% (2/129) 4.17 0.005674 0.023627
GO:0046483 heterocycle metabolic process 10.85% (14/129) 1.11 0.005643 0.023677
GO:0090304 nucleic acid metabolic process 9.3% (12/129) 1.22 0.005739 0.023723
GO:0071013 catalytic step 2 spliceosome 1.55% (2/129) 4.14 0.005909 0.024244
GO:0043069 negative regulation of programmed cell death 0.78% (1/129) 7.38 0.005993 0.024411
GO:0006725 cellular aromatic compound metabolic process 10.85% (14/129) 1.08 0.006857 0.027726
GO:1901575 organic substance catabolic process 5.43% (7/129) 1.65 0.007314 0.029361
GO:0006139 nucleobase-containing compound metabolic process 10.08% (13/129) 1.1 0.007911 0.031529
GO:0019751 polyol metabolic process 1.55% (2/129) 3.9 0.008146 0.032236
GO:0009055 electron transfer activity 1.55% (2/129) 3.89 0.008296 0.032601
GO:0072329 monocarboxylic acid catabolic process 1.55% (2/129) 3.88 0.008372 0.032668
GO:0016052 carbohydrate catabolic process 2.33% (3/129) 2.83 0.009025 0.034025
GO:0022625 cytosolic large ribosomal subunit 1.55% (2/129) 3.84 0.008781 0.034028
GO:0004372 glycine hydroxymethyltransferase activity 0.78% (1/129) 6.79 0.008977 0.034075
GO:0019264 glycine biosynthetic process from serine 0.78% (1/129) 6.79 0.008977 0.034075
GO:0070905 serine binding 0.78% (1/129) 6.79 0.008977 0.034075
GO:0022414 reproductive process 2.33% (3/129) 2.81 0.009362 0.034827
GO:0009056 catabolic process 5.43% (7/129) 1.58 0.009457 0.034947
GO:0006006 glucose metabolic process 1.55% (2/129) 3.8 0.009358 0.035047
GO:0003674 molecular_function 45.74% (59/129) 0.37 0.009619 0.035311
GO:0034440 lipid oxidation 1.55% (2/129) 3.77 0.009734 0.035502
GO:0004347 glucose-6-phosphate isomerase activity 0.78% (1/129) 6.6 0.010253 0.037149
GO:0005829 cytosol 4.65% (6/129) 1.71 0.010564 0.038029
GO:0006565 L-serine catabolic process 0.78% (1/129) 6.54 0.010677 0.038193
GO:0044248 cellular catabolic process 3.88% (5/129) 1.92 0.010783 0.038325
GO:0071704 organic substance metabolic process 23.26% (30/129) 0.61 0.011166 0.039433
GO:0019752 carboxylic acid metabolic process 4.65% (6/129) 1.68 0.011866 0.041644
GO:0006082 organic acid metabolic process 4.65% (6/129) 1.67 0.012063 0.041809
GO:0043436 oxoacid metabolic process 4.65% (6/129) 1.67 0.01202 0.041919
GO:0046655 folic acid metabolic process 0.78% (1/129) 6.33 0.012375 0.042626
GO:0015934 large ribosomal subunit 1.55% (2/129) 3.56 0.012793 0.043526
GO:1901615 organic hydroxy compound metabolic process 2.33% (3/129) 2.64 0.012748 0.043642
GO:0003838 sterol 24-C-methyltransferase activity 0.78% (1/129) 6.25 0.013011 0.044002
GO:0016070 RNA metabolic process 6.2% (8/129) 1.35 0.013775 0.046304
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 0.78% (1/129) 6.1 0.014494 0.04814
GO:0003677 DNA binding 6.98% (9/129) 1.24 0.014489 0.048413
GO:0051252 regulation of RNA metabolic process 6.2% (8/129) 1.34 0.014681 0.048473
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (129) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms