Coexpression cluster: Cluster_307 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0065003 protein-containing complex assembly 15.94% (11/69) 4.88 0.0 0.0
GO:0043614 multi-eIF complex 5.8% (4/69) 9.36 0.0 0.0
GO:0071540 eukaryotic translation initiation factor 3 complex, eIF3e 5.8% (4/69) 9.36 0.0 0.0
GO:0022607 cellular component assembly 15.94% (11/69) 4.31 0.0 0.0
GO:0015886 heme transport 5.8% (4/69) 9.42 0.0 0.0
GO:1901678 iron coordination entity transport 5.8% (4/69) 9.42 0.0 0.0
GO:0015232 heme transmembrane transporter activity 5.8% (4/69) 9.42 0.0 0.0
GO:0002188 translation reinitiation 5.8% (4/69) 9.18 0.0 0.0
GO:0017004 cytochrome complex assembly 7.25% (5/69) 7.92 0.0 0.0
GO:0043933 protein-containing complex organization 15.94% (11/69) 4.14 0.0 0.0
GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m 5.8% (4/69) 8.86 0.0 0.0
GO:0001732 formation of cytoplasmic translation initiation complex 5.8% (4/69) 8.68 0.0 0.0
GO:0002183 cytoplasmic translational initiation 5.8% (4/69) 8.21 0.0 0.0
GO:0006826 iron ion transport 5.8% (4/69) 7.7 0.0 0.0
GO:0005852 eukaryotic translation initiation factor 3 complex 5.8% (4/69) 7.48 0.0 0.0
GO:1990904 ribonucleoprotein complex 13.04% (9/69) 3.92 0.0 0.0
GO:0006409 tRNA export from nucleus 4.35% (3/69) 9.12 0.0 0.0
GO:0051031 tRNA transport 4.35% (3/69) 9.12 0.0 0.0
GO:0097064 ncRNA export from nucleus 4.35% (3/69) 8.82 0.0 1e-06
GO:0006413 translational initiation 5.8% (4/69) 6.23 0.0 4e-06
GO:0000041 transition metal ion transport 5.8% (4/69) 6.21 0.0 4e-06
GO:0022618 protein-RNA complex assembly 7.25% (5/69) 5.22 0.0 4e-06
GO:0071826 protein-RNA complex organization 7.25% (5/69) 5.17 0.0 4e-06
GO:0003743 translation initiation factor activity 5.8% (4/69) 5.83 1e-06 1e-05
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 4.35% (3/69) 7.32 1e-06 1.2e-05
GO:0016043 cellular component organization 15.94% (11/69) 2.59 2e-06 2.1e-05
GO:0019646 aerobic electron transport chain 4.35% (3/69) 6.82 3e-06 3e-05
GO:0008135 translation factor activity, RNA binding 5.8% (4/69) 5.17 5e-06 5.1e-05
GO:0090079 translation regulator activity, nucleic acid binding 5.8% (4/69) 5.17 5e-06 5.1e-05
GO:0071840 cellular component organization or biogenesis 15.94% (11/69) 2.43 6e-06 5.2e-05
GO:0032545 CURI complex 2.9% (2/69) 9.13 6e-06 5.3e-05
GO:0034456 UTP-C complex 2.9% (2/69) 9.13 6e-06 5.3e-05
GO:0022904 respiratory electron transport chain 4.35% (3/69) 6.31 8e-06 7.1e-05
GO:0045182 translation regulator activity 5.8% (4/69) 4.99 9e-06 7.1e-05
GO:0009060 aerobic respiration 4.35% (3/69) 6.19 1.1e-05 8.5e-05
GO:0045333 cellular respiration 4.35% (3/69) 6.15 1.2e-05 9e-05
GO:0022857 transmembrane transporter activity 14.49% (10/69) 2.45 1.4e-05 0.000101
GO:0004129 cytochrome-c oxidase activity 2.9% (2/69) 8.53 1.4e-05 0.000101
GO:0016675 oxidoreductase activity, acting on a heme group of donors 2.9% (2/69) 8.53 1.4e-05 0.000101
GO:0071705 nitrogen compound transport 10.14% (7/69) 3.17 1.3e-05 0.000101
GO:0032991 protein-containing complex 18.84% (13/69) 2.02 1.5e-05 0.000103
GO:0005215 transporter activity 14.49% (10/69) 2.38 2.2e-05 0.000144
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen 2.9% (2/69) 8.18 2.3e-05 0.00015
GO:0015276 ligand-gated monoatomic ion channel activity 4.35% (3/69) 5.79 2.4e-05 0.000152
GO:0022834 ligand-gated channel activity 4.35% (3/69) 5.79 2.4e-05 0.000152
GO:0015980 energy derivation by oxidation of organic compounds 4.35% (3/69) 5.58 3.8e-05 0.00023
GO:0009987 cellular process 39.13% (27/69) 1.09 4.7e-05 0.000281
GO:0071702 organic substance transport 10.14% (7/69) 2.85 5.6e-05 0.000327
GO:0009055 electron transfer activity 4.35% (3/69) 5.37 5.7e-05 0.000327
GO:0022900 electron transport chain 4.35% (3/69) 5.28 6.9e-05 0.000388
GO:0089701 U2AF complex 2.9% (2/69) 7.35 7.3e-05 0.000403
GO:0044237 cellular metabolic process 28.99% (20/69) 1.31 8.9e-05 0.000479
GO:0030628 pre-mRNA 3'-splice site binding 2.9% (2/69) 7.18 9.2e-05 0.000488
GO:0050658 RNA transport 4.35% (3/69) 5.03 0.000115 0.000569
GO:0050657 nucleic acid transport 4.35% (3/69) 5.03 0.000115 0.000569
GO:0051236 establishment of RNA localization 4.35% (3/69) 5.03 0.000115 0.000569
GO:0006405 RNA export from nucleus 4.35% (3/69) 5.04 0.000112 0.000583
GO:0005575 cellular_component 39.13% (27/69) 0.97 0.000199 0.000948
GO:0015075 monoatomic ion transmembrane transporter activity 7.25% (5/69) 3.23 0.000203 0.000951
GO:0030001 metal ion transport 5.8% (4/69) 3.82 0.000197 0.000957
GO:0016020 membrane 18.84% (13/69) 1.65 0.000216 0.000994
GO:0022836 gated channel activity 4.35% (3/69) 4.6 0.000277 0.001255
GO:0036002 pre-mRNA binding 2.9% (2/69) 6.28 0.000319 0.001424
GO:0051168 nuclear export 4.35% (3/69) 4.43 0.000388 0.001705
GO:0015931 nucleobase-containing compound transport 4.35% (3/69) 4.41 0.000406 0.001756
GO:0005216 monoatomic ion channel activity 4.35% (3/69) 4.24 0.000564 0.002402
GO:0006812 monoatomic cation transport 5.8% (4/69) 3.39 0.000599 0.002514
GO:0003729 mRNA binding 5.8% (4/69) 3.36 0.000648 0.002677
GO:0038023 signaling receptor activity 4.35% (3/69) 4.05 0.000834 0.003346
GO:0003723 RNA binding 10.14% (7/69) 2.2 0.000822 0.003349
GO:0060089 molecular transducer activity 4.35% (3/69) 4.0 0.00092 0.00354
GO:0006913 nucleocytoplasmic transport 4.35% (3/69) 4.0 0.000915 0.00357
GO:0051169 nuclear transport 4.35% (3/69) 4.0 0.000915 0.00357
GO:0006811 monoatomic ion transport 5.8% (4/69) 3.2 0.000991 0.003764
GO:0022803 passive transmembrane transporter activity 4.35% (3/69) 3.87 0.00119 0.0044
GO:0015267 channel activity 4.35% (3/69) 3.87 0.00119 0.0044
GO:0006091 generation of precursor metabolites and energy 4.35% (3/69) 3.51 0.002424 0.008515
GO:0005886 plasma membrane 8.7% (6/69) 2.14 0.002411 0.008576
GO:0071528 tRNA re-export from nucleus 1.45% (1/69) 8.7 0.002409 0.008677
GO:0016363 nuclear matrix 1.45% (1/69) 8.7 0.002409 0.008677
GO:0016651 oxidoreductase activity, acting on NAD(P)H 2.9% (2/69) 4.5 0.003643 0.012639
GO:0140513 nuclear protein-containing complex 7.25% (5/69) 2.28 0.003757 0.012876
GO:0032040 small-subunit processome 2.9% (2/69) 4.44 0.003924 0.013284
GO:0008152 metabolic process 28.99% (20/69) 0.85 0.004886 0.016343
GO:0098798 mitochondrial protein-containing complex 2.9% (2/69) 4.0 0.007102 0.02294
GO:0000314 organellar small ribosomal subunit 1.45% (1/69) 7.13 0.007094 0.023181
GO:0005763 mitochondrial small ribosomal subunit 1.45% (1/69) 7.13 0.007094 0.023181
GO:0006120 mitochondrial electron transport, NADH to ubiquinone 1.45% (1/69) 6.96 0.008006 0.025565
GO:0015399 primary active transmembrane transporter activity 4.35% (3/69) 2.88 0.008132 0.025675
GO:0015078 proton transmembrane transporter activity 2.9% (2/69) 3.8 0.009234 0.028832
GO:0006396 RNA processing 5.8% (4/69) 2.27 0.009775 0.030184
GO:0008187 poly-pyrimidine tract binding 1.45% (1/69) 6.6 0.010282 0.031405
GO:0050136 NADH dehydrogenase (quinone) activity 1.45% (1/69) 6.47 0.011191 0.033454
GO:0008137 NADH dehydrogenase (ubiquinone) activity 1.45% (1/69) 6.47 0.011191 0.033454
GO:0009059 macromolecule biosynthetic process 5.8% (4/69) 2.2 0.011467 0.033918
GO:0098796 membrane protein complex 4.35% (3/69) 2.64 0.01269 0.036762
GO:0005840 ribosome 2.9% (2/69) 3.55 0.012913 0.037025
GO:0030684 preribosome 2.9% (2/69) 3.56 0.012668 0.03708
GO:0005681 spliceosomal complex 2.9% (2/69) 3.53 0.013176 0.037399
GO:0009522 photosystem I 1.45% (1/69) 6.17 0.013799 0.038777
GO:0005739 mitochondrion 4.35% (3/69) 2.57 0.014435 0.039003
GO:0006810 transport 10.14% (7/69) 1.45 0.014024 0.039017
GO:0022853 active monoatomic ion transmembrane transporter activity 2.9% (2/69) 3.48 0.014167 0.03903
GO:0000243 commitment complex 1.45% (1/69) 6.11 0.014366 0.039192
GO:0008150 biological_process 40.58% (28/69) 0.54 0.015013 0.040178
GO:0032981 mitochondrial respiratory chain complex I assembly 1.45% (1/69) 6.0 0.015497 0.041082
GO:0016607 nuclear speck 1.45% (1/69) 5.81 0.017643 0.044265
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 1.45% (1/69) 5.81 0.017643 0.044265
GO:0005747 mitochondrial respiratory chain complex I 1.45% (1/69) 5.82 0.01753 0.044782
GO:0003735 structural constituent of ribosome 2.9% (2/69) 3.32 0.017347 0.045134
GO:0010257 NADH dehydrogenase complex assembly 1.45% (1/69) 5.85 0.017192 0.045149
GO:0051234 establishment of localization 10.14% (7/69) 1.39 0.017513 0.045149
GO:0000028 ribosomal small subunit assembly 1.45% (1/69) 5.73 0.018658 0.046398
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (69) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms