Coexpression cluster: Cluster_1984 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005674 transcription factor TFIIF complex 50.0% (1/2) 13.11 0.000113 0.005035
GO:0001096 TFIIF-class transcription factor complex binding 50.0% (1/2) 13.44 9e-05 0.007997
GO:0140223 general transcription initiation factor activity 50.0% (1/2) 9.74 0.001168 0.008662
GO:0032784 regulation of DNA-templated transcription elongation 50.0% (1/2) 9.48 0.001404 0.008925
GO:0032786 positive regulation of DNA-templated transcription, elongation 50.0% (1/2) 9.77 0.001148 0.009287
GO:0008134 transcription factor binding 50.0% (1/2) 9.52 0.001361 0.009316
GO:0001098 basal transcription machinery binding 50.0% (1/2) 9.89 0.001051 0.009358
GO:0001099 basal RNA polymerase II transcription machinery binding 50.0% (1/2) 9.89 0.001051 0.009358
GO:0016251 RNA polymerase II general transcription initiation factor activity 50.0% (1/2) 9.99 0.000985 0.010957
GO:0001091 RNA polymerase II general transcription initiation factor binding 50.0% (1/2) 11.34 0.000386 0.011452
GO:0140296 general transcription initiation factor binding 50.0% (1/2) 10.07 0.000932 0.011846
GO:0006352 DNA-templated transcription initiation 50.0% (1/2) 8.85 0.002162 0.012829
GO:0034243 regulation of transcription elongation by RNA polymerase II 50.0% (1/2) 10.38 0.000749 0.013327
GO:0006367 transcription initiation at RNA polymerase II promoter 50.0% (1/2) 10.08 0.000922 0.013672
GO:0090575 RNA polymerase II transcription regulator complex 50.0% (1/2) 8.54 0.002691 0.014967
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 50.0% (1/2) 10.44 0.000722 0.016066
GO:0045944 positive regulation of transcription by RNA polymerase II 50.0% (1/2) 8.1 0.003641 0.019062
GO:0005667 transcription regulator complex 50.0% (1/2) 7.52 0.005457 0.026984
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (1/2) 7.32 0.00626 0.027859
GO:0045893 positive regulation of DNA-templated transcription 50.0% (1/2) 7.32 0.00626 0.027859
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (1/2) 6.98 0.007882 0.02806
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (1/2) 7.02 0.007667 0.028431
GO:0009891 positive regulation of biosynthetic process 50.0% (1/2) 7.02 0.007667 0.028431
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (1/2) 7.02 0.007667 0.028431
GO:0031325 positive regulation of cellular metabolic process 50.0% (1/2) 6.71 0.009509 0.031345
GO:0032774 RNA biosynthetic process 50.0% (1/2) 6.76 0.009188 0.031451
GO:0051254 positive regulation of RNA metabolic process 50.0% (1/2) 7.06 0.007461 0.031621
GO:0009893 positive regulation of metabolic process 50.0% (1/2) 6.49 0.011065 0.031768
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (1/2) 6.49 0.011059 0.032808
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (1/2) 6.51 0.010913 0.033492
GO:0048522 positive regulation of cellular process 50.0% (1/2) 6.54 0.010741 0.034141
GO:0006357 regulation of transcription by RNA polymerase II 50.0% (1/2) 6.24 0.013215 0.035642
GO:0048518 positive regulation of biological process 50.0% (1/2) 6.28 0.012865 0.035781
GO:0044877 protein-containing complex binding 50.0% (1/2) 6.09 0.014607 0.038236
GO:0034654 nucleobase-containing compound biosynthetic process 50.0% (1/2) 5.87 0.017053 0.043365
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms